1LK9
The Three-dimensional Structure of Alliinase from Garlic
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | ALLIIN LYASE | polymer | 448 | 51516.5 | 2 | UniProt (Q01594) Pfam (PF04863) Pfam (PF04864) | Allium sativum (garlic) | ALLIINASE, CYSTEINE SULPHOXIDE LYASE |
| 2 | C (C) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G18638YB) | |||
| 3 | D, F (D, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | E (E) | alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G80587NA) | |||
| 5 | G, H, I, J, K... (A, B) | SULFATE ION | non-polymer | 96.1 | 11 | Chemie (SO4) | |||
| 6 | M, V (A, B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 7 | N, W (A, B) | PYRIDOXAL-5'-PHOSPHATE | non-polymer | 247.1 | 2 | Chemie (PLP) | |||
| 8 | O, P (A) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 2 | Chemie (EPE) | |||
| 9 | X (B) | 2-AMINO-ACRYLIC ACID | non-polymer | 87.1 | 1 | Chemie (DHA) | |||
| 10 | Y, Z (A, B) | water | water | 18.0 | 830 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 448 (UniProt: Q01594)
| PDB | External Database | Details |
|---|---|---|
| Asp 176 | Asn 214 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 103033.0 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1948.8 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 2185.6 | |
| All* | Total formula weight | 107167.4 |
