1LD8
Co-crystal structure of Human Farnesyltransferase with farnesyldiphosphate and inhibitor compound 49
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | protein farnesyltransferase alpha subunit | polymer | 382 | 44864.8 | 1 | UniProt (P49354) Pfam (PF01239) | Homo sapiens (human) | CAAX farnesyltransferase alpha subunit, RAS proteins prenyltransferase alpha, FTase-alpha |
| 2 | B (B) | protein farnesyltransferase beta subunit | polymer | 437 | 48822.4 | 1 | UniProt (P49356) Pfam (PF00432) | Homo sapiens (human) | CAAX farnesyltransferase beta subunit, RAS proteins prenyltransferase beta, FTase-beta |
| 3 | C (C) | beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose | branched | 342.3 | 1 | In PDB BIRD (PRD_900003) | sucrose | ||
| 4 | D, E (A) | ACETIC ACID | non-polymer | 60.1 | 2 | Chemie (ACY) | |||
| 5 | F (B) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 6 | G (B) | FARNESYL DIPHOSPHATE | non-polymer | 382.3 | 1 | Chemie (FPP) | |||
| 7 | H (B) | (20S)-19,20,21,22-TETRAHYDRO-19-OXO-5H-18,20-ETHANO-12,14-ETHENO-6,10-METHENO-18H-BENZ[D]IMIDAZO[4,3-K][1,6,9,12]OXATRI AZA-CYCLOOCTADECOSINE-9-CARBONITRILE | non-polymer | 435.5 | 1 | Chemie (U49) | |||
| 8 | I, J (A, B) | water | water | 18.0 | 691 | Chemie (HOH) |
Sequence modifications
A: 1 - 379 (UniProt: P49354)
| PDB | External Database | Details |
|---|---|---|
| Glu 380 | - | cloning artifact |
| Glu 381 | - | cloning artifact |
| Phe 382 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 93687.2 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 342.3 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1003.3 | |
| All* | Total formula weight | 95032.9 |
