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1K6Y

Crystal Structure of a Two-Domain Fragment of HIV-1 Integrase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Integrasepolymer21223319.54UniProt (Q72498)
Pfam (PF02022)
Pfam (PF00665)
UniProt (by SIFTS) (P12497)
Human immunodeficiency virus 1
2E, H, K, N
(A, B, C, D)
ZINC IONnon-polymer65.44Chemie (ZN)
3F, I, L, O
(A, B, C, D)
POTASSIUM IONnon-polymer39.14Chemie (K)
4G, J, M, P
(A, B, C, D)
PHOSPHATE IONnon-polymer95.04Chemie (PO4)
5Q, R, S, T
(A, B, C, D)
waterwater18.0176Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 212 (UniProt: Q72498)
PDBExternal DatabaseDetails
Asp 131Trp 846engineered mutation
Asp 139Phe 854engineered mutation
Lys 185Phe 900engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight93278.0
Non-Polymers*Number of molecules12
Total formula weight797.9
All*Total formula weight94075.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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