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1CVR

Crystal structure of the Arg specific cysteine proteinase gingipain R (RGPB)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
GINGIPAIN Rpolymer43547932.81UniProt (P95493)
Pfam (PF01364)
Pfam (PF03785)
Porphyromonas gingivalisRGPB
2B
(A)
D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-phenylalaninamidenon-polymer501.01BIRD (PRD_001160)
Chemie (H37)
3C, D, E, F, G...
(A)
CALCIUM IONnon-polymer40.16Chemie (CA)
4H, J
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
5K
(A)
waterwater18.0322Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight47932.8
Non-Polymers*Number of molecules9
Total formula weight872.3
All*Total formula weight48805.1
*Water molecules are not included.

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PDB entries from 2025-07-09

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