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1CVR

Crystal structure of the Arg specific cysteine proteinase gingipain R (RGPB)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]289
Detector technologyIMAGE PLATE
Collection date1997-09-02
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths51.930, 79.920, 99.820
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 2.000
Rwork0.163
R-free0.20700
RMSD bond length0.009
RMSD bond angle1.550
Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((TRUNCATE))
Phasing softwareMOLREP
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.6402.140
High resolution limit [Å]2.0002.030
Rmerge0.0780.231
Number of reflections25583
<I/σ(I)>7.1
Completeness [%]99.096.3
Redundancy3.33.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629315 % PEG 8000 100 MM ZINC ACETATE 100 MM SODIUM CACODYLATE, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirsodium cacodylate0.1 (M)
21reservoirPEG800015 (%)
31reservoirzinc acetate0.1 (M)

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