1CFR
  • Download 1cfr
  • View 1cfr
Molmil generated image of 1cfr
CRYSTAL STRUCTURE OF CITROBACTER FREUNDII RESTRICTION ENDONUCLEASE CFR10I AT 2.15 ANGSTROMS RESOLUTION.
Descriptor:RESTRICTION ENDONUCLEASE
Authors:Bozic, D., Grazulis, S., Siksnys, V., Huber, R.
Deposit date:1996-02-02
Release date:1997-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of Citrobacter freundii restriction endonuclease Cfr10I at 2.15 A resolution.
J.Mol.Biol., 255, 1996
1KNV
  • Download 1knv
  • View 1knv
Molmil generated image of 1knv
BSE634I RESTRICTION ENDONUCLEASE
Descriptor:Bse634I restriction endonuclease, ACETATE ION, CHLORIDE ION
Authors:Grazulis, S., Deibert, M., Rimseliene, R., Skirgaila, R., Sasnauskas, G., Lagunavicius, A., Repin, V., Urbanke, C., Huber, R., Siksnys, V.
Deposit date:2001-12-19
Release date:2002-02-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure of the Bse634I restriction endonuclease: comparison of two enzymes recognizing the same DNA sequence.
Nucleic Acids Res., 30, 2002
3DPG
  • Download 3dpg
  • View 3dpg
Molmil generated image of 3dpg
SGRAI WITH NONCOGNATE DNA BOUND
Descriptor:DNA (5'-D(*DAP*DAP*DGP*DTP*DCP*DGP*DAP*DCP*DCP*DGP*DGP*DTP*DGP*DGP*DAP*DCP*DT)-3'), SgraIR restriction enzyme, CALCIUM ION
Authors:Dunten, P.W., Horton, N.C., Little, E.J.
Deposit date:2008-07-08
Release date:2008-08-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The structure of SgrAI bound to DNA; recognition of an 8 base pair target.
Nucleic Acids Res., 36, 2008
3DVO
  • Download 3dvo
  • View 3dvo
Molmil generated image of 3dvo
SGRAI WITH COGNATE DNA AND CALCIUM BOUND
Descriptor:DNA (5'-D(*DGP*DAP*DGP*DTP*DCP*DCP*DAP*DCP*DCP*DGP*DGP*DTP*DGP*DGP*DAP*DCP*DTP*DC)-3'), SgraIR restriction enzyme, CALCIUM ION
Authors:Dunten, P.W., Horton, N.C., Little, E.J.
Deposit date:2008-07-18
Release date:2008-08-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:The structure of SgrAI bound to DNA; recognition of an 8 base pair target.
Nucleic Acids Res., 36, 2008
3DW9
  • Download 3dw9
  • View 3dw9
Molmil generated image of 3dw9
SGRAI WITH COGNATE DNA AND MANGANESE BOUND
Descriptor:DNA (5'-D(*DGP*DAP*DGP*DTP*DCP*DCP*DAP*DCP*DCP*DGP*DGP*DTP*DGP*DGP*DAP*DCP*DTP*DC)-3'), SgraIR restriction enzyme, MANGANESE (II) ION
Authors:Dunten, P.W., Horton, N.C., Little, E.J.
Deposit date:2008-07-21
Release date:2008-08-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of SgrAI bound to DNA; recognition of an 8 base pair target.
Nucleic Acids Res., 36, 2008
3MQ6
  • Download 3mq6
  • View 3mq6
Molmil generated image of 3mq6
DOMAIN SWAPPED SGRAI WITH DNA AND CALCIUM BOUND
Descriptor:SgraIR restriction enzyme, DNA (5'-D(*AP*AP*GP*TP*CP*CP*AP*CP*CP*GP*GP*TP*GP*GP*AP*CP*T)-3'), CALCIUM ION
Authors:Dunten, P.W., Horton, N.C., Little, E.J.
Deposit date:2010-04-27
Release date:2010-11-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Domain swapping in allosteric modulation of DNA specificity.
Plos Biol., 8, 2010
3MQY
  • Download 3mqy
  • View 3mqy
Molmil generated image of 3mqy
SGRAI WITH CLEAVED DNA AND MAGNESIUM BOUND
Descriptor:SgraIR restriction enzyme, DNA (5'-D(*GP*AP*GP*TP*CP*CP*A)-3'), DNA (5'-D(P*CP*CP*GP*GP*TP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Dunten, P.W., Horton, N.C., Little, E.J.
Deposit date:2010-04-28
Release date:2010-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:New clues in the allosteric activation of DNA cleavage by SgrAI: structures of SgrAI bound to cleaved primary-site DNA and uncleaved secondary-site DNA.
Acta Crystallogr.,Sect.D, 67, 2011
3N78
  • Download 3n78
  • View 3n78
Molmil generated image of 3n78
SGRAI BOUND TO SECONDARY SITE DNA AND MG(II)
Descriptor:SgraIR restriction enzyme, DNA (5'-D(*AP*GP*TP*CP*CP*AP*CP*CP*GP*GP*GP*GP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*CP*CP*CP*CP*CP*GP*GP*TP*GP*GP*AP*CP*T)-3'), ...
Authors:Horton, N.C., Little, E.J., Dunten, P.W.
Deposit date:2010-05-26
Release date:2010-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:New clues in the allosteric activation of DNA cleavage by SgrAI: structures of SgrAI bound to cleaved primary-site DNA and uncleaved secondary-site DNA.
Acta Crystallogr.,Sect.D, 67, 2011
3N7B
  • Download 3n7b
  • View 3n7b
Molmil generated image of 3n7b
SGRAI BOUND TO SECONDARY SITE DNA AND CA(II)
Descriptor:SgraIR restriction enzyme, DNA (5'-D(*AP*GP*TP*CP*CP*AP*CP*CP*GP*GP*GP*GP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*CP*CP*CP*CP*CP*GP*GP*TP*GP*GP*AP*CP*T)-3'), ...
Authors:Horton, N.C., Little, E.J., Dunten, P.W.
Deposit date:2010-05-26
Release date:2010-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:New clues in the allosteric activation of DNA cleavage by SgrAI: structures of SgrAI bound to cleaved primary-site DNA and uncleaved secondary-site DNA.
Acta Crystallogr.,Sect.D, 67, 2011
3V1Z
  • Download 3v1z
  • View 3v1z
Molmil generated image of 3v1z
CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA
Descriptor:Endonuclease Bse634IR, DNA (5'-D(*TP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*CP*G)-3')
Authors:Manakova, E.N., Grazulis, S., Golovenko, D., Tamulaitiene, G.
Deposit date:2011-12-11
Release date:2012-04-25
Last modified:2012-11-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural mechanisms of the degenerate sequence recognition by Bse634I restriction endonuclease.
Nucleic Acids Res., 40, 2012
3V20
  • Download 3v20
  • View 3v20
Molmil generated image of 3v20
CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA
Descriptor:Endonuclease Bse634IR, DNA (5'-D(*TP*CP*GP*CP*AP*CP*CP*GP*GP*TP*GP*CP*G)-3'), CHLORIDE ION, ...
Authors:Manakova, E.N., Grazulis, S., Golovenko, D., Tamulaitiene, G.
Deposit date:2011-12-11
Release date:2012-04-25
Last modified:2012-11-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural mechanisms of the degenerate sequence recognition by Bse634I restriction endonuclease.
Nucleic Acids Res., 40, 2012
3V21
  • Download 3v21
  • View 3v21
Molmil generated image of 3v21
CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA
Descriptor:Endonuclease Bse634IR, DNA (5'-D(*TP*TP*CP*GP*AP*CP*CP*GP*GP*TP*CP*GP*A)-3')
Authors:Manakova, E.N., Grazulis, S., Golovenko, D., Tamulaitiene, G.
Deposit date:2011-12-11
Release date:2012-04-25
Last modified:2012-11-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural mechanisms of the degenerate sequence recognition by Bse634I restriction endonuclease.
Nucleic Acids Res., 40, 2012
4C3G
  • Download 4c3g
  • View 4c3g
Molmil generated image of 4c3g
CRYO-EM STRUCTURE OF ACTIVATED AND OLIGOMERIC RESTRICTION ENDONUCLEASE SGRAI
Descriptor:SGRAIR RESTRICTION ENZYME, 5'-D(*GP*AP*TP*GP*CP*GP*TP*GP*GP*GP*TP*CP*TP*TP *CP*AP*CP*AP)-3', 5'-D(*CP*CP*GP*GP*TP*GP*TP*GP*AP*AP*GP*AP*CP*CP *CP*AP*CP*GP*CP*AP*TP*CP)-3'
Authors:Lyumkis, D., Talley, H., Stewart, A., Shah, S., Park, C.K., Tama, F., Potter, C.S., Carragher, B., Horton, N.C.
Deposit date:2013-08-23
Release date:2013-09-11
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Allosteric Regulation of DNA Cleavage and Sequence-Specificity Through Run-on Oligomerization.
Structure, 21, 2013
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2018 Protein Data Bank Japan