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6JZ2
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BU of 6jz2 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
5Z1B
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BU of 5z1b by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with coumarin-3-O-glucuronide
Descriptor: 3-HYDROXY-2H-CHROMEN-2-ONE, Glycosyl hydrolase family 2, TIM barrel domain protein, ...
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
6JZ7
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BU of 6jz7 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine
Descriptor: (3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-1-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6ZJS
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BU of 6zjs by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with galactose
Descriptor: (2S)-2-hydroxybutanedioic acid, ACETATE ION, Beta-galactosidase, ...
Authors:Rutkiewicz, M, Bujacz, A, Bujacz, G.
Deposit date:2020-06-29
Release date:2020-08-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 21, 2020
1JZ7
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BU of 1jz7 by Molmil
E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE
Descriptor: Beta-Galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Juers, D.H, Matthews, B.W.
Deposit date:2001-09-13
Release date:2001-12-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
1JZ8
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BU of 1jz8 by Molmil
E. COLI (lacZ) BETA-GALACTOSIDASE (E537Q) IN COMPLEX WITH ALLOLACTOSE
Descriptor: Beta-Galactosidase, D(-)-TARTARIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Juers, D.H, Matthews, B.W.
Deposit date:2001-09-13
Release date:2001-12-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
6JZ3
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BU of 6jz3 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin
Descriptor: (2~{S},3~{R},4~{R},5~{S})-3,4,5-tris(oxidanyl)piperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
1JYW
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BU of 1jyw by Molmil
E. COLI (lacZ) BETA-GALACTOSIDASE (E537Q) IN COMPLEX WITH PNPG
Descriptor: 4-nitrophenyl beta-D-galactopyranoside, Beta-Galactosidase, DIMETHYL SULFOXIDE, ...
Authors:Juers, D.H, Matthews, B.W.
Deposit date:2001-09-13
Release date:2001-12-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
6JZ5
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BU of 6jz5 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid
Descriptor: Beta-glucuronidase, beta-D-glucopyranuronic acid
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ8
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BU of 6jz8 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.583 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
4TTG
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BU of 4ttg by Molmil
Beta-galactosidase (E. coli) in the presence of potassium chloride.
Descriptor: Beta-galactosidase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Juers, D.H.
Deposit date:2014-06-20
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elucidating factors important for monovalent cation selectivity in enzymes: E. coli beta-galactosidase as a model.
Phys Chem Chem Phys, 17, 2015
1PX4
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BU of 1px4 by Molmil
E. COLI (LACZ) BETA-GALACTOSIDASE (G794A) WITH IPTG BOUND
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Juers, D.H, Hakda, S, Matthews, B.W, Huber, R.E.
Deposit date:2003-07-02
Release date:2004-06-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for the Altered Activity of Gly794 Variants of Escherichia coli Beta-Galactosidase
Biochemistry, 42, 2003
1PX3
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BU of 1px3 by Molmil
E. COLI (LACZ) BETA-GALACTOSIDASE (G794A)
Descriptor: DIMETHYL SULFOXIDE, MAGNESIUM ION, SODIUM ION, ...
Authors:Juers, D.H, Hakda, S, Matthews, B.W, Huber, R.E.
Deposit date:2003-07-02
Release date:2004-06-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for the Altered Activity of Gly794 Variants of Escherichia coli Beta-Galactosidase
Biochemistry, 42, 2003
6JZ6
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BU of 6jz6 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.605 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6LDB
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BU of 6ldb by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with uronic isofagomine
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, LacZ1 Beta-galactosidase
Authors:Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
Deposit date:2019-11-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
1DP0
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BU of 1dp0 by Molmil
E. COLI BETA-GALACTOSIDASE AT 1.7 ANGSTROM
Descriptor: BETA-GALACTOSIDASE, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
Deposit date:1999-12-22
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
6ZJQ
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BU of 6zjq by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q in complex with galactose
Descriptor: ACETATE ION, Beta-galactosidase, MALONATE ION, ...
Authors:Rutkiewicz, M, Bujacz, A, Bujacz, G.
Deposit date:2020-06-29
Release date:2020-08-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 21, 2020
3HN3
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BU of 3hn3 by Molmil
Human beta-glucuronidase at 1.7 A resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Klei, H.E, Ghosh, K, Anumula, R.
Deposit date:2009-05-29
Release date:2009-12-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Human beta-glucuronidasel at 1.7 A resolution
To be Published
6JZ4
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BU of 6jz4 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam
Descriptor: (2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxopiperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ1
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BU of 6jz1 by Molmil
Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
1JYX
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BU of 1jyx by Molmil
E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH IPTG
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, Beta-Galactosidase, DIMETHYL SULFOXIDE, ...
Authors:Juers, D.H, Matthews, B.W.
Deposit date:2001-09-13
Release date:2001-12-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
6ZJU
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BU of 6zju by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with saccharose
Descriptor: ACETATE ION, Beta-galactosidase, MALONATE ION, ...
Authors:Rutkiewicz, M, Bujacz, A, Bujacz, G.
Deposit date:2020-06-29
Release date:2020-08-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 21, 2020
3DYP
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BU of 3dyp by Molmil
E. coli (lacZ) beta-galactosidase (H418N)
Descriptor: Beta-galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Juers, D.H, Huber, R.E, Matthews, B.W.
Deposit date:2008-07-28
Release date:2008-10-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Direct and indirect roles of His-418 in metal binding and in the activity of beta-galactosidase (E. coli).
Protein Sci., 18, 2009
1JZ3
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BU of 1jz3 by Molmil
E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-DEOXY-GALACTOSYL ENZYME INTERMEDIATE
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-deoxy-alpha-D-galactopyranose, Beta-Galactosidase, ...
Authors:Juers, D.H, Matthews, B.W.
Deposit date:2001-09-13
Release date:2001-12-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
3T09
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BU of 3t09 by Molmil
E. coli (LacZ) beta-galactosidase (S796A) galactonolactone complex
Descriptor: Beta-galactosidase, D-galactonolactone, DIMETHYL SULFOXIDE, ...
Authors:Jancewicz, L.J, Wheatley, R.W, Sutendra, G, Lee, M, Fraser, M, Huber, R.E.
Deposit date:2011-07-19
Release date:2012-01-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Ser-796 of Beta-Galactosidase (E. coli) Plays a Key Role in Maintaining an Optimum Balance between the Opened and Closed Conformations of the Catalytically Important Active Site Loop
Arch.Biochem.Biophys., 517, 2012

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PDB entries from 2024-09-18

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