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2MQH
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BU of 2mqh by Molmil
Solution structure of the Chlamydomonas reinhardtii NAB1 cold shock domain, CSD1
Descriptor: Nucleic acid binding protein
Authors:Sawyer, A, Mobli, M.
Deposit date:2014-06-20
Release date:2015-05-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the RNA-binding cold-shock domain of the Chlamydomonas reinhardtii NAB1 protein and insights into RNA recognition.
Biochem.J., 469, 2015
2YTY
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BU of 2yty by Molmil
Solution structure of the fourth cold-shock domain of the human KIAA0885 protein (UNR protein)
Descriptor: Cold shock domain-containing protein E1
Authors:Goroncy, A.K, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein.
J.Struct.Funct.Genom., 11, 2010
3AQQ
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BU of 3aqq by Molmil
Crystal structure of human CRHSP-24
Descriptor: Calcium-regulated heat stable protein 1
Authors:Hou, H, Wang, F, Zhang, W, Wang, D, Li, X, Bartlam, M, Yao, X, Rao, Z.
Deposit date:2010-11-17
Release date:2010-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:CRHSP-24 is a novel cargo adaptor trafficking between stress granules and processing bodies
To be Published
2L15
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BU of 2l15 by Molmil
Solution Structure of Cold Shock Protein CspA Using Combined NMR and CS-Rosetta method
Descriptor: Cold shock protein CspA
Authors:Tang, Y, Schneider, W.M, Shen, Y, Raman, S, Inouye, M, Baker, D, Roth, M.J, Montelione, G.T.
Deposit date:2010-07-22
Release date:2010-09-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Fully automated high-quality NMR structure determination of small (2)H-enriched proteins.
J Struct Funct Genomics, 11, 2010
2ES2
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BU of 2es2 by Molmil
Crystal Structure Analysis of the Bacillus Subtilis Cold Shock Protein Bs-CspB in Complex with Hexathymidine
Descriptor: 5'-D(*TP*TP*TP*TP*TP*T)-3', CALCIUM ION, Cold shock protein cspB
Authors:Max, K.E.A, Bienert, M, Heinemann, U.
Deposit date:2005-10-25
Release date:2006-09-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:T-rich DNA single strands bind to a preformed site on the bacterial cold shock protein Bs-CspB.
J.Mol.Biol., 360, 2006
2F52
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BU of 2f52 by Molmil
Solution structure of cold shock protein CspB from Bacillus subtilis in complex with heptathymidine
Descriptor: Cold shock protein cspB
Authors:Zeeb, M, Sticht, H, Balbach, J.
Deposit date:2005-11-25
Release date:2006-09-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Recognition of T-rich single-stranded DNA by the cold shock protein Bs-CspB in solution.
Nucleic Acids Res., 34, 2006
5YTT
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BU of 5ytt by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCAUGU
Descriptor: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*UP*GP*U)-3'), SULFATE ION
Authors:Yang, X, Huang, Y.
Deposit date:2017-11-20
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
5YTS
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BU of 5yts by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCUUCU
Descriptor: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*CP*UP*UP*C)-3'), SULFATE ION
Authors:Yang, X, Huang, Y.
Deposit date:2017-11-20
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
5YTV
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BU of 5ytv by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCAUCU
Descriptor: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*UP*CP*U)-3')
Authors:Yang, X, Huang, Y.
Deposit date:2017-11-20
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
6A6L
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BU of 6a6l by Molmil
Crystal structure of the cold shock domain of YB-1 in complex with m5C RNA
Descriptor: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*CP*AP*UP*(5MC))-3')
Authors:Huang, Y.
Deposit date:2018-06-28
Release date:2019-06-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of the cold shock domain of YB-1 in complex with m5C RNA
To Be Published
2I5M
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BU of 2i5m by Molmil
Crystal structure of Bacillus subtilis cold shock protein CspB variant A46K S48R
Descriptor: Cold shock protein cspB, MAGNESIUM ION
Authors:Max, K.E.A, Heinemann, U.
Deposit date:2006-08-25
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Optimized variants of the cold shock protein from in vitro selection: structural basis of their high thermostability.
J.Mol.Biol., 369, 2007
2I5L
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BU of 2i5l by Molmil
Crystal structure of Bacillus subtilis Cold Shock Protein variant Bs-CspB M1R/E3K/K65I
Descriptor: Cold shock protein cspB
Authors:Max, K.E.A, Heinemann, U.
Deposit date:2006-08-25
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Optimized variants of the cold shock protein from in vitro selection: structural basis of their high thermostability.
J.Mol.Biol., 369, 2007
5XV9
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BU of 5xv9 by Molmil
Solution Structure of Cold Shock Protein from Colwellia psychrerythraea
Descriptor: Cold-shock DNA-binding domain family protein
Authors:Lee, Y, Kim, Y.
Deposit date:2017-06-27
Release date:2018-07-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Tyr51: Key Determinant of the Low Thermostability of the Colwellia psychrerythraea Cold-Shock Protein.
Biochemistry, 57, 2018
5YTX
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BU of 5ytx by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCAACU
Descriptor: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*AP*CP*U)-3')
Authors:Yang, X, Huang, Y.
Deposit date:2017-11-20
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
6A6J
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BU of 6a6j by Molmil
Crystal structure of Zebra fish Y-box protein1 (YB-1) Cold-shock domain in complex with 6mer m5C RNA
Descriptor: RNA (5'-R(P*CP*AP*UP*(5MC)P*U)-3'), ZINC ION, Zebra fish Y-box protein1 (YB-1)
Authors:Zhang, M.M, Wu, B.X, Huang, Y, Ma, J.B.
Deposit date:2018-06-28
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay.
Mol.Cell, 75, 2019
2HAX
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BU of 2hax by Molmil
Crystal structure of Bacillus caldolyticus cold shock protein in complex with hexathymidine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-D(*TP*TP*TP*TP*TP*T)-3', CALCIUM ION, ...
Authors:Max, K.E.A, Heinemann, U.
Deposit date:2006-06-13
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Common mode of DNA binding to cold shock domains. Crystal structure of hexathymidine bound to the domain-swapped form of a major cold shock protein from Bacillus caldolyticus.
Febs J., 274, 2007
2K5N
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BU of 2k5n by Molmil
Solution NMR Structure of the N-Terminal Domain of Protein ECA1580 from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR156A
Descriptor: Putative cold-shock protein
Authors:Mills, J.L, Eletsky, A, Zhang, Q, Lee, D, Jiang, M, Ciccosanti, C, Xiao, R, Lui, J, Everett, J.K, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-06-30
Release date:2008-08-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure of the Putative Cold Shock Protein from Erwinia carotovora: Northeast Structural Genomics Consortium Target EwR156a
To be Published
2KCM
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BU of 2kcm by Molmil
Solution NMR structure of the N-terminal OB-domain of SO_1732 from Shewanella oneidensis. Northeast Structural Genomics Consortium Target SoR210A.
Descriptor: Cold shock domain family protein
Authors:Ramelot, T.A, Maglaqui, M, Jiang, M, Ciccosanti, C, Xiao, R, Lui, J, Everett, J.K, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-12-23
Release date:2009-02-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of the N-terminal OB-domain of SO_1732 from Shewanella oneidensis. Northeast Structural Genomics Consortium Target SoR210A.
To be Published
8H1I
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BU of 8h1i by Molmil
Crystal structure of PlyGRCS, a bacteriophage Endolysin in complex with Cold shock protein C
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Cold shock-like protein CspC, ...
Authors:Padmanabhan, B, Gopinatha, K, Mandal, M, Saranya, G, Sudhagar, B.
Deposit date:2022-10-03
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of PlyGRCS, a bacteriophage Endolysin in complex with Cold shock protein C
To Be Published
7OII
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BU of 7oii by Molmil
CspA-70 cotranslational folding intermediate 2
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Samatova, E, Macher, M, Liutkute, M, Gil-Carton, D, Novacek, J, Valle, M, Rodnina, M.V.
Deposit date:2021-05-11
Release date:2022-01-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A switch from alpha-helical to beta-strand conformation during co-translational protein folding.
Embo J., 41, 2022
5UDZ
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BU of 5udz by Molmil
Human LIN28A in complex with let-7f-1 microRNA pre-element
Descriptor: Protein lin-28 homolog A, ZINC ION, let-7f-1 pre-element
Authors:Nam, Y, Wang, L, Sliz, P.
Deposit date:2016-12-29
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:LIN28 Zinc Knuckle Domain Is Required and Sufficient to Induce let-7 Oligouridylation.
Cell Rep, 18, 2017
4QQB
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BU of 4qqb by Molmil
Structural basis for the assembly of the SXL-UNR translation regulatory complex
Descriptor: Protein sex-lethal, Upstream of N-ras, isoform A, ...
Authors:Hennig, J, Popowicz, G.M, Sattler, M.
Deposit date:2014-06-27
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for the assembly of the Sxl-Unr translation regulatory complex.
Nature, 515, 2014
7ZHR
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BU of 7zhr by Molmil
Complex structure of drosophila Unr CSD789 and pAbp RRM3
Descriptor: Polyadenylate-binding protein, Upstream of N-ras, isoform A
Authors:Hollmann, N.M, Jagtap, P.K.A, Hennig, J.
Deposit date:2022-04-07
Release date:2022-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Upstream of N-Ras C-terminal cold shock domains mediate poly(A) specificity in a novel RNA recognition mode and bind poly(A) binding protein.
Nucleic Acids Res., 51, 2023
8OPS
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BU of 8ops by Molmil
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 1
Descriptor: Protein lin-28 homolog A, RNA (71-MER) Let7g, Terminal uridylyltransferase 7, ...
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-08
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
8OPT
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BU of 8opt by Molmil
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 2
Descriptor: Protein lin-28 homolog A, RNA (53-MER), Terminal uridylyltransferase 7, ...
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-08
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024

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PDB entries from 2024-09-18

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