Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7ET1
DownloadVisualize
BU of 7et1 by Molmil
Cryo-EM structure of the gastric proton pump K791S/E820D/Y340N/E936V/Y799W mutant in K+-occluded (K+)E2-AlF state
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K.
登録日2021-05-12
公開日2021-09-01
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Gastric proton pump with two occluded K + engineered with sodium pump-mimetic mutations.
Nat Commun, 12, 2021
8WA5
DownloadVisualize
BU of 8wa5 by Molmil
Cryo-EM structure of the gastric proton pump Y799W/E936Q mutant in K+-occluded (K+)E2-AlF state
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K.
登録日2023-09-07
公開日2023-11-29
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Specific protonation of acidic residues confers K + selectivity to the gastric proton pump.
J.Biol.Chem., 300, 2023
6RB2
DownloadVisualize
BU of 6rb2 by Molmil
Structure of the (SR)Ca2+-ATPase mutant E340A in the Ca2-E1-CaAMPPCP form
分子名称: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
著者Clausen, J.D, Montigny, C, Lenoir, G, Arnou, B, Jaxel, C, Moller, J.V, Nissen, P, Andersen, J.P, Le Maire, M, Bublitz, M.
登録日2019-04-09
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.20001125 Å)
主引用文献The SERCA residue Glu340 mediates interdomain communication that guides Ca 2+ transport.
Proc.Natl.Acad.Sci.USA, 117, 2020
4BEW
DownloadVisualize
BU of 4bew by Molmil
SERCA bound to phosphate analogue
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, ACETATE ION, MAGNESIUM ION, ...
著者Drachmann, N.D, Mattle, D, Laursen, M, Bublitz, M, Olesen, C, Moeller, J.V, Nissen, P, Morth, J.P.
登録日2013-03-12
公開日2014-02-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Serca Bound to Phosphate Analogue
To be Published
7QTV
DownloadVisualize
BU of 7qtv by Molmil
Beryllium fluoride form of the Na+,K+-ATPase (E2-BeFx)
分子名称: 1-O-decanoyl-beta-D-tagatofuranosyl beta-D-allopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Fruergaard, M.U, Dach, I, Andersen, J.L, Ozol, M, Shahsavar, A, Quistgaard, E.M, Poulsen, H, Fedosova, N.U, Nissen, P.
登録日2022-01-16
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.05 Å)
主引用文献The Na + ,K + -ATPase in complex with beryllium fluoride mimics an ATPase phosphorylated state.
J.Biol.Chem., 298, 2022
6HXB
DownloadVisualize
BU of 6hxb by Molmil
SERCA2a from pig heart
分子名称: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
著者Sitsel, A, Andersen, J.L, Nissen, P, Olesen, C.
登録日2018-10-16
公開日2019-02-27
最終更新日2020-09-30
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structures of the heart specific SERCA2a Ca 2+ -ATPase.
Embo J., 38, 2019
4KYT
DownloadVisualize
BU of 4kyt by Molmil
The structure of superinhibitory phospholamban bound to the calcium pump SERCA1a
分子名称: Cardiac phospholamban, POTASSIUM ION, SERCA1a, ...
著者Hurley, T.D, Akin, B.L, Jones, L.R.
登録日2013-05-29
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.833 Å)
主引用文献The structural basis for phospholamban inhibition of the calcium pump in sarcoplasmic reticulum.
J.Biol.Chem., 288, 2013
2O9J
DownloadVisualize
BU of 2o9j by Molmil
Crystal structure of calcium atpase with bound magnesium fluoride and cyclopiazonic acid
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, MAGNESIUM ION, SODIUM ION, ...
著者Young, H.S, Moncoq, K.A.
登録日2006-12-13
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The molecular basis for cyclopiazonic Acid inhibition of the sarcoplasmic reticulum calcium pump.
J.Biol.Chem., 282, 2007
2OA0
DownloadVisualize
BU of 2oa0 by Molmil
Crystal structure of Calcium ATPase with bound ADP and cyclopiazonic acid
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Young, H.S, Moncoq, K.A.
登録日2006-12-14
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The molecular basis for cyclopiazonic Acid inhibition of the sarcoplasmic reticulum calcium pump.
J.Biol.Chem., 282, 2007
4NAB
DownloadVisualize
BU of 4nab by Molmil
Structure of the (SR)Ca2+-ATPase mutant E309Q in the Ca2-E1-MgAMPPCP form
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, POTASSIUM ION, ...
著者Bublitz, M, Clausen, J.D, Arnou, B, Montigny, C, Jaxel, C, Nissen, P, Moller, J.V, Andersen, J.P, le Maire, M.
登録日2013-10-22
公開日2013-12-18
最終更新日2017-08-09
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献SERCA mutant E309Q binds two Ca(2+) ions but adopts a catalytically incompetent conformation.
Embo J., 32, 2013
4UU0
DownloadVisualize
BU of 4uu0 by Molmil
CRYSTAL STRUCTURE OF (SR) CALCIUM-ATPASE E2(TG) IN THE PRESENCE OF 14:1 PC
分子名称: GLYCEROL, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
著者Drachmann, N.D, Olesen, C, Moeller, J.V, Guo, Z, Nissen, P, Bublitz, M.
登録日2014-07-24
公開日2014-10-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Comparing Crystal Structures of Ca(2+) -ATPase in the Presence of Different Lipids.
FEBS J., 281, 2014
4UX1
DownloadVisualize
BU of 4ux1 by Molmil
Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. AlF)
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2014-08-18
公開日2014-09-17
最終更新日2014-11-12
実験手法ELECTRON CRYSTALLOGRAPHY (8 Å)
主引用文献Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
4UU1
DownloadVisualize
BU of 4uu1 by Molmil
CRYSTAL STRUCTURE OF (SR) CALCIUM-ATPASE E2(TG) IN THE PRESENCE OF DOPC
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, GLYCEROL, MAGNESIUM ION, ...
著者Drachmann, N.D, Olesen, C, Moeller, J.V, Guo, Z, Nissen, P, Bublitz, M.
登録日2014-07-24
公開日2014-10-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Comparing Crystal Structures of Ca(2+) -ATPase in the Presence of Different Lipids.
FEBS J., 281, 2014
5KSD
DownloadVisualize
BU of 5ksd by Molmil
Crystal Structure of a Plasma Membrane Proton Pump
分子名称: ATPase 2, plasma membrane-type, DODECYL-BETA-D-MALTOSIDE, ...
著者Croll, T, Pedersen, B.P, Nissen, P.
登録日2016-07-08
公開日2016-08-10
最終更新日2017-05-17
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Improved Model of Proton Pump Crystal Structure Obtained by Interactive Molecular Dynamics Flexible Fitting Expands the Mechanistic Model for Proton Translocation in P-Type ATPases.
Front Physiol, 8, 2017
4RET
DownloadVisualize
BU of 4ret by Molmil
Crystal structure of the Na,K-ATPase E2P-digoxin complex with bound magnesium
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Gregersen, J.L, Laursen, M, Yatime, L, Nissen, P, Fedosova, N.U.
登録日2014-09-23
公開日2015-01-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structures and characterization of digoxin- and bufalin-bound Na+,K+-ATPase compared with the ouabain-bound complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
4RES
DownloadVisualize
BU of 4res by Molmil
Crystal structure of the Na,K-ATPase E2P-bufalin complex with bound potassium
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Laursen, M, Yatime, L, Gregersen, J.L, Nissen, P, Fedosova, N.U.
登録日2014-09-23
公開日2015-01-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.408 Å)
主引用文献Structures and characterization of digoxin- and bufalin-bound Na+,K+-ATPase compared with the ouabain-bound complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
1IWO
DownloadVisualize
BU of 1iwo by Molmil
Crystal structure of the SR Ca2+-ATPase in the absence of Ca2+
分子名称: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
著者Toyoshima, C, Nomura, H.
登録日2002-05-26
公開日2002-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural changes in the calcium pump accompanying the dissociation of calcium
Nature, 418, 2002
5MPM
DownloadVisualize
BU of 5mpm by Molmil
SERCA2a from pig heart
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, MAGNESIUM ION, POTASSIUM ION, ...
著者Drachmann, N.D, Sitsel, A, Andersen, J.L, Nissen, P, Olesen, C.
登録日2016-12-16
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of the heart specific SERCA2a Ca2+-ATPase.
Embo J., 38, 2019
3IXZ
DownloadVisualize
BU of 3ixz by Molmil
Pig gastric H+/K+-ATPase complexed with aluminium fluoride
分子名称: Potassium-transporting ATPase alpha, Potassium-transporting ATPase subunit beta
著者Abe, K, Tani, K, Nishizawa, T, Fujiyoshi, Y.
登録日2009-03-09
公開日2009-06-23
最終更新日2024-02-21
実験手法ELECTRON CRYSTALLOGRAPHY (6.5 Å)
主引用文献Inter-subunit interaction of gastric H+,K+-ATPase prevents reverse reaction of the transport cycle
Embo J., 28, 2009
4UX2
DownloadVisualize
BU of 4ux2 by Molmil
Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. MgF)
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2014-08-18
公開日2014-09-17
最終更新日2014-11-12
実験手法ELECTRON CRYSTALLOGRAPHY (7 Å)
主引用文献Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
5NCQ
DownloadVisualize
BU of 5ncq by Molmil
Structure of the (SR) Ca2+-ATPase bound to a Tetrahydrocarbazole and TNP-ATP
分子名称: (1~{S})-~{N}-[(4-bromophenyl)methyl]-7-(trifluoromethyloxy)-2,3,4,9-tetrahydro-1~{H}-carbazol-1-amine, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, POTASSIUM ION, ...
著者Bublitz, M, Kjellerup, L, O'Hanlon Cohrt, K, Gordon, S, Mortensen, A.L, Clausen, J.D, Pallin, D, Hansen, J.B, Brown, W.D, Fuglsang, A, Winther, A.-M.L.
登録日2017-03-06
公開日2018-01-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Tetrahydrocarbazoles are a novel class of potent P-type ATPase inhibitors with antifungal activity.
PLoS ONE, 13, 2018
3J7T
DownloadVisualize
BU of 3j7t by Molmil
Calcium atpase structure with two bound calcium ions determined by electron crystallography of thin 3D crystals
分子名称: CALCIUM ION, SODIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
著者Yonekura, K, Kato, K, Ogasawara, M, Tomita, M, Toyoshima, C.
登録日2014-08-07
公開日2015-02-18
最終更新日2016-09-28
実験手法ELECTRON CRYSTALLOGRAPHY (3.4 Å)
主引用文献Electron crystallography of ultrathin 3D protein crystals: atomic model with charges
Proc.Natl.Acad.Sci.USA, 112, 2015
1KJU
DownloadVisualize
BU of 1kju by Molmil
Ca2+-ATPase in the E2 State
分子名称: Sarcoplasmic/endoplasmic reticulum calcium ATPase 1a
著者Xu, C, Rice, W.J, He, W, Stokes, D.L.
登録日2001-12-05
公開日2001-12-19
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献A structural model for the catalytic cycle of Ca(2+)-ATPase.
J.Mol.Biol., 316, 2002
3KDP
DownloadVisualize
BU of 3kdp by Molmil
Crystal structure of the sodium-potassium pump
分子名称: CHOLESTEROL, MAGNESIUM ION, Na+/K+ ATPase gamma subunit transcript variant a, ...
著者Morth, J.P, Pedersen, B.P, Nissen, P.
登録日2009-10-23
公開日2010-02-16
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of the sodium-potassium pump.
Nature, 450, 2007
1MHS
DownloadVisualize
BU of 1mhs by Molmil
Model of Neurospora crassa proton ATPase
分子名称: Plasma Membrane ATPase
著者Kuhlbrandt, W.
登録日2002-08-21
公開日2002-09-18
最終更新日2024-02-14
実験手法ELECTRON CRYSTALLOGRAPHY (8 Å)
主引用文献Structure, mechanism and regulation of the Neurospora plasma membrane H+-ATPase
Science, 297, 2002

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon