Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2KGW
DownloadVisualize
BU of 2kgw by Molmil
Solution Structure of the carboxy-terminal domain of OmpATb, a pore forming protein from Mycobacterium tuberculosis
Descriptor: Outer membrane protein A
Authors:Yang, Y, Auguin, D, Delbecq, S, Hoh, F, Dumas, E, Molle, V, Saint, N.
Deposit date:2009-03-20
Release date:2010-03-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the Mycobacterium tuberculosis OmpATb protein: A model of an oligomeric channel in the mycobacterial cell wall.
Proteins, 79, 2011
3KHN
DownloadVisualize
BU of 3khn by Molmil
Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris.
Descriptor: MotB protein, putative
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-30
Release date:2009-12-01
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris
To be Published
1OAP
DownloadVisualize
BU of 1oap by Molmil
Mad structure of the periplasmique domain of the Escherichia coli PAL protein
Descriptor: PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN, SULFATE ION
Authors:Abergel, C, Walburger, A, Bouveret, E, Claverie, J.M.
Deposit date:2003-01-20
Release date:2004-02-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystallization and preliminary crystallographic study of the peptidoglycan-associated lipoprotein from Escherichia coli.
Acta Crystallogr.,Sect.D, 57, 2001
3LDT
DownloadVisualize
BU of 3ldt by Molmil
Crystal structure of an Outer membrane protein(OmpA)from Legionella pneumophila
Descriptor: GLYCEROL, Outer membrane protein, OmpA family protein
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-01-13
Release date:2010-02-02
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an Outer membrane protein(OmpA)from Legionella pneumophila
To be Published
1R1M
DownloadVisualize
BU of 1r1m by Molmil
Structure of the OmpA-like domain of RmpM from Neisseria meningitidis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer membrane protein class 4
Authors:Grizot, S, Buchanan, S.K.
Deposit date:2003-09-24
Release date:2004-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the OmpA-like domain of RmpM from Neisseria meningitidis
Mol.Microbiol., 51, 2004
3IMP
DownloadVisualize
BU of 3imp by Molmil
New crystal form of the C-terminal domain of Helicobacter pylori MotB (residues 125-256)
Descriptor: CHLORIDE ION, Chemotaxis protein motB, NICKEL (II) ION
Authors:Roujeinikova, A.
Deposit date:2009-08-11
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic and Molecular Dynamics Analysis of Loop Motions Unmasking the Peptidoglycan-Binding Site in Stator Protein MotB of Flagellar Motor
Plos One, 6, 2011
6U83
DownloadVisualize
BU of 6u83 by Molmil
OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-ALANINE, Outer membrane associated protein, ...
Authors:Michalska, K, Skarina, T, Stogios, P.J, Di Leo, R, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-09-04
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3566 Å)
Cite:OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
7RJJ
DownloadVisualize
BU of 7rjj by Molmil
Crystal Structure of the Peptidoglycan Binding Domain of the Outer Membrane Protein (OmpA) from Klebsiella pneumoniae with bound D-alanine
Descriptor: CHLORIDE ION, D-ALANINE, OmpA family protein
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-21
Release date:2021-07-28
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
7BBA
DownloadVisualize
BU of 7bba by Molmil
Structure of the TagL peptidoglycan binding domain from EAEC T6SS
Descriptor: Putative type VI secretion protein, SULFATE ION
Authors:Nguyen, V.S, Cambillau, C, Leone, P.
Deposit date:2020-12-17
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Anchoring the T6SS to the cell wall: Crystal structure of the peptidoglycan binding domain of the TagL accessory protein.
Plos One, 16, 2021
2AIZ
DownloadVisualize
BU of 2aiz by Molmil
Solution structure of peptidoglycan associated lipoprotein from Haemophilus influenza bound to UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
Descriptor: L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine, N-acetyl-beta-muramic acid, Outer membrane protein P6 (Fragment), ...
Authors:Parsons, L.M, Lin, F, Orban, J, Structure 2 Function Project (S2F)
Deposit date:2005-08-01
Release date:2006-03-14
Last modified:2023-02-15
Method:SOLUTION NMR
Cite:Peptidoglycan recognition by pal, an outer membrane lipoprotein.
Biochemistry, 45, 2006
6IKJ
DownloadVisualize
BU of 6ikj by Molmil
Crystal structure of YfiB(F48S)
Descriptor: GLYCEROL, SULFATE ION, YfiB
Authors:Li, S, Zhang, Q, Bartlam, M.
Deposit date:2018-10-16
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural analysis of activating mutants of YfiB from Pseudomonas aeruginosa PAO1.
Biochem. Biophys. Res. Commun., 506, 2018
3OON
DownloadVisualize
BU of 3oon by Molmil
The structure of an outer membrance protein from Borrelia burgdorferi B31
Descriptor: Outer membrane protein (Tpn50), SULFATE ION
Authors:Fan, Y, Bigelow, L, Feldman, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-31
Release date:2010-09-22
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.
Protein Sci., 26, 2017
6IKI
DownloadVisualize
BU of 6iki by Molmil
Crystal structure of YfiB(W55L)
Descriptor: GLYCEROL, SULFATE ION, YfiB
Authors:Li, S, Zhang, Q, Bartlam, M.
Deposit date:2018-10-16
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Structural analysis of activating mutants of YfiB from Pseudomonas aeruginosa PAO1.
Biochem. Biophys. Res. Commun., 506, 2018
5NHX
DownloadVisualize
BU of 5nhx by Molmil
Periplasmic domain of Outer Membrane Protein A from Klebsiella pneumoniae
Descriptor: CITRIC ACID, Outer membrane protein A
Authors:Demange, P, Tranier, S, Nars, G, Iordanov, I, Mourey, L, Saurel, O, Milon, A.
Deposit date:2017-03-22
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and dynamics of the C-terminal domain of OmpA from Klebsiella pneumonia
To Be Published
3CYQ
DownloadVisualize
BU of 3cyq by Molmil
The crystal structure of the complex of the C-terminal domain of Helicobacter pylori MotB (residues 125-256) with N-acetylmuramic acid
Descriptor: Chemotaxis protein motB, N-acetyl-beta-muramic acid
Authors:Roujeinikova, A.
Deposit date:2008-04-26
Release date:2008-07-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the cell wall anchor domain of MotB, a stator component of the bacterial flagellar motor: implications for peptidoglycan recognition.
Proc.Natl.Acad.Sci.Usa, 2008
3CYP
DownloadVisualize
BU of 3cyp by Molmil
The crystal structure of the C-terminal domain of Helicobacter pylori MotB (residues 125-256).
Descriptor: Chemotaxis protein motB
Authors:Roujeinikova, A.
Deposit date:2008-04-26
Release date:2008-07-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the cell wall anchor domain of MotB, a stator component of the bacterial flagellar motor: implications for peptidoglycan recognition.
Proc.Natl.Acad.Sci.Usa, 105, 2008
5N2C
DownloadVisualize
BU of 5n2c by Molmil
Crystal structure of the peptidoglycan-associated lipoprotein from Burkholderia cenocepacia
Descriptor: 1,2-ETHANEDIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, ACETATE ION, ...
Authors:Matterazzo, E, Bolognesi, M, Gourlay, L.J.
Deposit date:2017-02-07
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Designing Probes for Immunodiagnostics: Structural Insights into an Epitope Targeting Burkholderia Infections.
ACS Infect Dis, 3, 2017
6JFW
DownloadVisualize
BU of 6jfw by Molmil
Crystal structure of PA0833 periplasmic domain from Pseudomonas aeruginosa reveals an unexpected enlarged peptidoglycan binding pocket
Descriptor: PA0833-PD protein
Authors:Lin, X, Ye, F, Lin, S, Yang, F.L, Chen, Z.M, Cao, Y, Chen, Z.J, Gu, J, Lu, G.W.
Deposit date:2019-02-12
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of PA0833 periplasmic domain from Pseudomonas aeruginosa reveals an unexpected enlarged peptidoglycan binding pocket.
Biochem. Biophys. Res. Commun., 511, 2019
2K1S
DownloadVisualize
BU of 2k1s by Molmil
Solution NMR structure of the folded C-terminal fragment of YiaD from Escherichia coli. Northeast Structural Genomics Consortium target ER553.
Descriptor: Inner membrane lipoprotein yiaD
Authors:Ramelot, T.A, Zhao, L, Hamilton, K, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-03-14
Release date:2008-05-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of the folded C-terminal fragment of YiaD from Escherichia coli. Northeast Structural Genomics Consortium target ER553.
To be Published
4PWT
DownloadVisualize
BU of 4pwt by Molmil
Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92
Descriptor: FORMIC ACID, PYROPHOSPHATE 2-, Peptidoglycan-associated lipoprotein, ...
Authors:Maltseva, N, Kim, Y, Osipiuk, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-03-21
Release date:2014-04-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92
To be Published
5Y40
DownloadVisualize
BU of 5y40 by Molmil
Structure of the periplasmic domain of the MotB L119P mutant from Salmonella (crystal form 2)
Descriptor: Motility protein B
Authors:Takao, M, Kojima, S, Sakuma, M, Homma, M, Imada, K.
Deposit date:2017-07-31
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Helix Rearrangement in the Periplasmic Domain of the Flagellar Stator B Subunit Activates Peptidoglycan Binding and Ion Influx.
Structure, 26, 2018
4ZHW
DownloadVisualize
BU of 4zhw by Molmil
Crystal structure of a bacterial signalling protein (N-terminal truncation)
Descriptor: YfiB
Authors:Li, S, Li, T, Wang, Y, Bartlam, M.
Deposit date:2015-04-27
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.391 Å)
Cite:Structural insights into YfiR sequestering by YfiB in Pseudomonas aeruginosa PAO1
Sci Rep, 5, 2015
5EB0
DownloadVisualize
BU of 5eb0 by Molmil
crystal form II of YfiB belonging to P41
Descriptor: SULFATE ION, YfiB
Authors:Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
Deposit date:2015-10-17
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
4ZHV
DownloadVisualize
BU of 4zhv by Molmil
Crystal structure of a bacterial signalling protein
Descriptor: SULFATE ION, YfiB
Authors:Li, S, Li, T, Wang, Y, Bartlam, M.
Deposit date:2015-04-27
Release date:2016-04-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.585 Å)
Cite:Structural insights into YfiR sequestering by YfiB in Pseudomonas aeruginosa PAO1
Sci Rep, 5, 2015
4RHA
DownloadVisualize
BU of 4rha by Molmil
Structure of the C-terminal domain of outer-membrane protein OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Outer membrane protein A, ...
Authors:Cuff, M.E, Skarina, T, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-10-01
Release date:2014-10-29
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.
Protein Sci., 26, 2017

 

1234>

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon