Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NKB

A 1.9A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage

Resources
File formatFile name (file size)
PDBx/mmCIF3nkb.cif.gz Display(58.11 KB)
3nkb.cif
PDBx/mmJSONall3nkb.json.gz Display (Tree)(40.94 KB)
3nkb.json
no-atom3nkb-noatom.json.gz Display (Header)(14.66 KB)
3nkb-noatom.json
add only3nkb-plus.json.gz Display(207.00 B)
3nkb-plus.json
PDBMLall3nkb.xml.gz Display(76.01 KB)
3nkb.xml
no-atom3nkb-noatom.xml.gz Display(26.52 KB)
3nkb-noatom.xml
ext-atom3nkb-extatom.xml.gz Display(37.56 KB)
3nkb-extatom.xml
pdb_nextgenallpdb_00003nkb_xyz-enrich.cif.gz Display(58.19 KB)
pdb_00003nkb_xyz-enrich.cif
no-atompdb_00003nkb_xyz-no-atom-enrich.xml.gz Display(26.54 KB)
pdb_00003nkb_xyz-no-atom-enrich.xml
ng-only3nkb-plus.json.gz Display(36.00 B)
3nkb-plus.json
PDBpdb3nkb.ent.gz Display(39.99 KB)
pdb3nkb.ent
RDF3nkb.rdf.gz Visualize(58.78 KB)
3nkb.rdf
Structure factorsr3nkbsf.ent.gz Display(156.04 KB)
r3nkbsf.ent
Biological unit (mmCIF format)3nkb-assembly1.cif.gz Display(42.51 KB)
3nkb-assembly1.cif (A,B)

*author and software defined assembly, 2 molecule(s) (dimeric)

Biological unit (PDB format)3nkb.pdb1.gz Display(34.41 KB)
3nkb.pdb1 (A,B)

*author and software defined assembly, 2 molecule(s) (dimeric)

Validation reportsPDF3nkb_validation.pdf.gz Display(411.00 KB)
3nkb_validation.pdf
PDF-full3nkb_full_validation.pdf.gz Display(410.97 KB)
3nkb_full_validation.pdf
mmCIF3nkb_validation.cif.gz Display(9.34 KB)
3nkb_validation.cif
XML3nkb_validation.xml.gz Display(6.44 KB)
3nkb_validation.xml
PNG3nkb_multipercentile_validation.png.gz Display(140.55 KB)
3nkb_multipercentile_validation.png
SVG3nkb_multipercentile_validation.svg.gz Display(908.00 B)
3nkb_multipercentile_validation.svg
EDMap2fo-fc (PDBx/mmCIF)3nkb_validation_2fo-fc_map_coef.cif.gz Display(213.55 KB)
3nkb_validation_2fo-fc_map_coef.cif
fo-fc (PDBx/mmCIF)3nkb_validation_fo-fc_map_coef.cif.gz Display(200.70 KB)
3nkb_validation_fo-fc_map_coef.cif
2fo-fc (MTZ)3nkb_validation_2fo-fc_map_coef.mtz Visualize(514.07 KB)
fo-fc (MTZ)3nkb_validation_fo-fc_map_coef.mtz Visualize(514.07 KB)

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon