9OJM
Human mitochondrial 28S PIC with tRNA and mtIF2
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 0 | 0003735 | molecular_function | structural constituent of ribosome |
| 0 | 0005739 | cellular_component | mitochondrion |
| 0 | 0005743 | cellular_component | mitochondrial inner membrane |
| 0 | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| 0 | 0032543 | biological_process | mitochondrial translation |
| 2 | 0001650 | cellular_component | fibrillar center |
| 2 | 0003723 | molecular_function | RNA binding |
| 2 | 0005515 | molecular_function | protein binding |
| 2 | 0005634 | cellular_component | nucleus |
| 2 | 0005654 | cellular_component | nucleoplasm |
| 2 | 0005739 | cellular_component | mitochondrion |
| 2 | 0005743 | cellular_component | mitochondrial inner membrane |
| 2 | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| 2 | 0032543 | biological_process | mitochondrial translation |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005515 | molecular_function | protein binding |
| E | 0005739 | cellular_component | mitochondrion |
| E | 0005743 | cellular_component | mitochondrial inner membrane |
| E | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| E | 0006412 | biological_process | translation |
| E | 0015935 | cellular_component | small ribosomal subunit |
| E | 0032543 | biological_process | mitochondrial translation |
| E | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| Q | 0003723 | molecular_function | RNA binding |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005739 | cellular_component | mitochondrion |
| Q | 0005743 | cellular_component | mitochondrial inner membrane |
| Q | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| Q | 0006412 | biological_process | translation |
| Q | 0032543 | biological_process | mitochondrial translation |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005739 | cellular_component | mitochondrion |
| T | 0005743 | cellular_component | mitochondrial inner membrane |
| T | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| T | 0032543 | biological_process | mitochondrial translation |
| V | 0000049 | molecular_function | tRNA binding |
| V | 0005515 | molecular_function | protein binding |
| V | 0005737 | cellular_component | cytoplasm |
| V | 0005739 | cellular_component | mitochondrion |
| V | 0005743 | cellular_component | mitochondrial inner membrane |
| V | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| V | 0008283 | biological_process | cell population proliferation |
| V | 0019843 | molecular_function | rRNA binding |
| V | 0032543 | biological_process | mitochondrial translation |
| Z | 0003735 | molecular_function | structural constituent of ribosome |
| Z | 0005739 | cellular_component | mitochondrion |
| Z | 0005743 | cellular_component | mitochondrial inner membrane |
| Z | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| Z | 0006412 | biological_process | translation |
| Z | 0032543 | biological_process | mitochondrial translation |
Functional Information from PROSITE/UniProt
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. MhGLimG.GLeVisitDnTPiPHN |
| Chain | Residue | Details |
| I | MET162-ASN184 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAnR |
| Chain | Residue | Details |
| J | LYS71-ARG78 |
| site_id | PS00057 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S18 Ribosomal protein S18 signature. VDYkn.VqlLsqFVSPftGCIygrHI |
| Chain | Residue | Details |
| P | VAL72-ILE96 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGrsAQagAirlAmAKAL |
| Chain | Residue | Details |
| G | GLY334-LEU352 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRkksIrVlvAVGNgk.GaAGfSigkat.DRmd.AF |
| Chain | Residue | Details |
| D | GLY236-PHE268 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VrSLFDARVHLG |
| Chain | Residue | Details |
| B | VAL81-GLY92 |
| site_id | PS01176 |
| Number of Residues | 23 |
| Details | IF2 Initiation factor 2 signature. GsLtsLKHhKddisiVktGmDCG |
| Chain | Residue | Details |
| 7 | GLY671-GLY693 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 80 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 30 |
| Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 64 |
| Details | Coiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 42 |
| Details | Domain: {"description":"CHCH","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 10 |
| Details | Motif: {"description":"Cx9C motif 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 10 |
| Details | Motif: {"description":"Cx9C motif 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 68 |
| Details | Repeat: {"description":"PPR 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 34 |
| Details | Repeat: {"description":"PPR 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 40 |
| Details | Repeat: {"description":"PPR 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 36 |
| Details | Repeat: {"description":"PPR 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 41 |
| Details | Repeat: {"description":"PPR 6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 34 |
| Details | Repeat: {"description":"PPR 7"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 34 |
| Details | Repeat: {"description":"PPR 8"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 34 |
| Details | Repeat: {"description":"PPR 9"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 34 |
| Details | Repeat: {"description":"PPR 10"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 8 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 170 |
| Details | Domain: {"description":"tr-type G"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 7 |
| Details | Region: {"description":"G1","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 4 |
| Details | Region: {"description":"G2","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 3 |
| Details | Region: {"description":"G3","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 3 |
| Details | Region: {"description":"G4","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 2 |
| Details | Region: {"description":"G5","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 13 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q91YJ5","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 64 |
| Details | Domain: {"description":"S5 DRBM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00268","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 35 |
| Details | Repeat: {"description":"PPR 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"25838379","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 10 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
