Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8VK9

Structure of UbV.d2.3 in complex with Ube2d2-S22R

Functional Information from GO Data
ChainGOidnamespacecontents
A0000209biological_processprotein polyubiquitination
A0004842molecular_functionubiquitin-protein transferase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005829cellular_componentcytosol
A0006511biological_processubiquitin-dependent protein catabolic process
A0016567biological_processprotein ubiquitination
A0032991cellular_componentprotein-containing complex
A0036211biological_processprotein modification process
A0051865biological_processprotein autoubiquitination
A0061630molecular_functionubiquitin protein ligase activity
A0061631molecular_functionubiquitin conjugating enzyme activity
A0070062cellular_componentextracellular exosome
A0070936biological_processprotein K48-linked ubiquitination
C0000209biological_processprotein polyubiquitination
C0004842molecular_functionubiquitin-protein transferase activity
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005829cellular_componentcytosol
C0006511biological_processubiquitin-dependent protein catabolic process
C0016567biological_processprotein ubiquitination
C0032991cellular_componentprotein-containing complex
C0036211biological_processprotein modification process
C0051865biological_processprotein autoubiquitination
C0061630molecular_functionubiquitin protein ligase activity
C0061631molecular_functionubiquitin conjugating enzyme activity
C0070062cellular_componentextracellular exosome
C0070936biological_processprotein K48-linked ubiquitination
E0000209biological_processprotein polyubiquitination
E0004842molecular_functionubiquitin-protein transferase activity
E0005515molecular_functionprotein binding
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005829cellular_componentcytosol
E0006511biological_processubiquitin-dependent protein catabolic process
E0016567biological_processprotein ubiquitination
E0032991cellular_componentprotein-containing complex
E0036211biological_processprotein modification process
E0051865biological_processprotein autoubiquitination
E0061630molecular_functionubiquitin protein ligase activity
E0061631molecular_functionubiquitin conjugating enzyme activity
E0070062cellular_componentextracellular exosome
E0070936biological_processprotein K48-linked ubiquitination
G0000209biological_processprotein polyubiquitination
G0004842molecular_functionubiquitin-protein transferase activity
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005654cellular_componentnucleoplasm
G0005829cellular_componentcytosol
G0006511biological_processubiquitin-dependent protein catabolic process
G0016567biological_processprotein ubiquitination
G0032991cellular_componentprotein-containing complex
G0036211biological_processprotein modification process
G0051865biological_processprotein autoubiquitination
G0061630molecular_functionubiquitin protein ligase activity
G0061631molecular_functionubiquitin conjugating enzyme activity
G0070062cellular_componentextracellular exosome
G0070936biological_processprotein K48-linked ubiquitination
Functional Information from PROSITE/UniProt
site_idPS00183
Number of Residues16
DetailsUBC_1 Ubiquitin-conjugating (UBC) active site signature. YHPNInsn.GsICLdiL
ChainResidueDetails
ATYR74-LEU89

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues584
DetailsDomain: {"description":"UBC core","evidences":[{"source":"PROSITE-ProRule","id":"PRU00388","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"description":"Glycyl thioester intermediate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00388","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10133","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

251422

PDB entries from 2026-04-01

PDB statisticsPDBj update infoContact PDBjnumon