8V07
Crystal structure of mouse PLD3 co-crystallized with 5'Pi-ssDNA for 30 days
Functional Information from GO Data
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | ACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU00153, ECO:0000305|PubMed:38537643 |
| Chain | Residue | Details |
| B | HIS199 | |
| A | HIS199 | |
| C | HIS199 | |
| D | HIS199 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | ACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU00153 |
| Chain | Residue | Details |
| B | LYS201 | |
| B | ASP206 | |
| A | LYS201 | |
| A | ASP206 | |
| C | LYS201 | |
| C | ASP206 | |
| D | LYS201 | |
| D | ASP206 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | ACT_SITE: Nucleophile => ECO:0000305|PubMed:38537643 |
| Chain | Residue | Details |
| B | HIS414 | |
| A | HIS414 | |
| C | HIS414 | |
| D | HIS414 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 16 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:38537643, ECO:0007744|PDB:8V06 |
| Chain | Residue | Details |
| B | HIS199 | |
| C | LYS201 | |
| C | ASN216 | |
| C | HIS414 | |
| D | HIS199 | |
| D | LYS201 | |
| D | ASN216 | |
| D | HIS414 | |
| B | LYS201 | |
| B | ASN216 | |
| B | HIS414 | |
| A | HIS199 | |
| A | LYS201 | |
| A | ASN216 | |
| A | HIS414 | |
| C | HIS199 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000250|UniProtKB:Q8IV08 |
| Chain | Residue | Details |
| B | PHE436 | |
| A | PHE436 | |
| C | PHE436 | |
| D | PHE436 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 4 |
| Details | SITE: Cleavage; by lysosomal cysteine proteases => ECO:0000250|UniProtKB:Q8IV08 |
| Chain | Residue | Details |
| B | ASN71 | |
| A | ASN71 | |
| C | ASN71 | |
| D | ASN71 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 8 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:38537643, ECO:0007744|PDB:8V05 |
| Chain | Residue | Details |
| B | ASN97 | |
| B | ASN234 | |
| A | ASN97 | |
| A | ASN234 | |
| C | ASN97 | |
| C | ASN234 | |
| D | ASN97 | |
| D | ASN234 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 4 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255 |
| Chain | Residue | Details |
| B | ASN132 | |
| A | ASN132 | |
| C | ASN132 | |
| D | ASN132 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 8 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000250|UniProtKB:Q8IV08 |
| Chain | Residue | Details |
| B | ASN282 | |
| B | ASN385 | |
| A | ASN282 | |
| A | ASN385 | |
| C | ASN282 | |
| C | ASN385 | |
| D | ASN282 | |
| D | ASN385 |
