8PUG
Structure of the immature HTLV-1 CA lattice from full-length Gag VLPs: CA-NTD refinement
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0005198 | molecular_function | structural molecule activity |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0016032 | biological_process | viral process |
| A | 0019013 | cellular_component | viral nucleocapsid |
| A | 0019028 | cellular_component | viral capsid |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016032 | biological_process | viral process |
| B | 0019013 | cellular_component | viral nucleocapsid |
| B | 0019028 | cellular_component | viral capsid |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0003676 | molecular_function | nucleic acid binding |
| C | 0005198 | molecular_function | structural molecule activity |
| C | 0008270 | molecular_function | zinc ion binding |
| C | 0016032 | biological_process | viral process |
| C | 0019013 | cellular_component | viral nucleocapsid |
| C | 0019028 | cellular_component | viral capsid |
| C | 0046872 | molecular_function | metal ion binding |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 51 |
| Details | ZN_FING: CCHC-type 1 => ECO:0000255|PROSITE-ProRule:PRU00047 |
| Chain | Residue | Details |
| A | GLN225-GLN242 | |
| B | GLN225-GLN242 | |
| C | GLN225-GLN242 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 51 |
| Details | ZN_FING: CCHC-type 2 => ECO:0000255|PROSITE-ProRule:PRU00047 |
| Chain | Residue | Details |
| A | GLY248-ARG265 | |
| B | GLY248-ARG265 | |
| C | GLY248-ARG265 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 6 |
| Details | SITE: Cleavage; by viral protease => ECO:0000305|PubMed:6280175 |
| Chain | Residue | Details |
| A | LEU0 | |
| A | LEU214 | |
| B | LEU0 | |
| B | LEU214 | |
| C | LEU0 | |
| C | LEU214 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 3 |
| Details | MOD_RES: Phosphoserine; by host MAPK1 => ECO:0000269|PubMed:16635502 |
| Chain | Residue | Details |
| A | SER-25 | |
| B | SER-25 | |
| C | SER-25 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 3 |
| Details | LIPID: N-myristoyl glycine; by host => ECO:0000255, ECO:0000269|PubMed:11333909, ECO:0000269|PubMed:1398108 |
| Chain | Residue | Details |
| A | GLY-128 | |
| B | GLY-128 | |
| C | GLY-128 |
