8HK7
Structure of PKD2-F604P (Polycystin-2, TRPP2) with ML-SA1
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005509 | molecular_function | calcium ion binding |
A | 0016020 | cellular_component | membrane |
B | 0005509 | molecular_function | calcium ion binding |
B | 0016020 | cellular_component | membrane |
C | 0005509 | molecular_function | calcium ion binding |
C | 0016020 | cellular_component | membrane |
D | 0005509 | molecular_function | calcium ion binding |
D | 0016020 | cellular_component | membrane |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 84 |
Details | TRANSMEM: Helical; Name=S1 => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | VAL220-MET241 | |
B | VAL220-MET241 | |
C | VAL220-MET241 | |
D | VAL220-MET241 |
site_id | SWS_FT_FI2 |
Number of Residues | 1076 |
Details | TOPO_DOM: Extracellular => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | MET242-THR468 | |
C | TYR527-ALA552 | |
C | GLY620-GLU631 | |
C | ALA647-ARG654 | |
D | MET242-THR468 | |
D | TYR527-ALA552 | |
D | GLY620-GLU631 | |
D | ALA647-ARG654 | |
A | TYR527-ALA552 | |
A | GLY620-GLU631 | |
A | ALA647-ARG654 | |
B | MET242-THR468 | |
B | TYR527-ALA552 | |
B | GLY620-GLU631 | |
B | ALA647-ARG654 | |
C | MET242-THR468 |
site_id | SWS_FT_FI3 |
Number of Residues | 80 |
Details | TRANSMEM: Helical; Name=S2 => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | PHE469-VAL489 | |
B | PHE469-VAL489 | |
C | PHE469-VAL489 | |
D | PHE469-VAL489 |
site_id | SWS_FT_FI4 |
Number of Residues | 152 |
Details | TOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | GLU490-SER505 | |
A | PHE574-LEU597 | |
B | GLU490-SER505 | |
B | PHE574-LEU597 | |
C | GLU490-SER505 | |
C | PHE574-LEU597 | |
D | GLU490-SER505 | |
D | PHE574-LEU597 |
site_id | SWS_FT_FI5 |
Number of Residues | 80 |
Details | TRANSMEM: Helical; Name=S3 => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | PHE506-ILE526 | |
B | PHE506-ILE526 | |
C | PHE506-ILE526 | |
D | PHE506-ILE526 |
site_id | SWS_FT_FI6 |
Number of Residues | 80 |
Details | TRANSMEM: Helical; Name=S4 => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | TYR553-LEU573 | |
B | TYR553-LEU573 | |
C | TYR553-LEU573 | |
D | TYR553-LEU573 |
site_id | SWS_FT_FI7 |
Number of Residues | 84 |
Details | TRANSMEM: Helical; Name=5 => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | PHE598-PHE619 | |
B | PHE598-PHE619 | |
C | PHE598-PHE619 | |
D | PHE598-PHE619 |
site_id | SWS_FT_FI8 |
Number of Residues | 56 |
Details | INTRAMEM: Pore-forming => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | CYS632-PHE646 | |
B | CYS632-PHE646 | |
C | CYS632-PHE646 | |
D | CYS632-PHE646 |
site_id | SWS_FT_FI9 |
Number of Residues | 80 |
Details | TRANSMEM: Helical; Name=S6 => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | VAL655-MET675 | |
B | VAL655-MET675 | |
C | VAL655-MET675 | |
D | VAL655-MET675 |
site_id | SWS_FT_FI10 |
Number of Residues | 8 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | ASN299 | |
A | ASN305 | |
B | ASN299 | |
B | ASN305 | |
C | ASN299 | |
C | ASN305 | |
D | ASN299 | |
D | ASN305 |
site_id | SWS_FT_FI11 |
Number of Residues | 4 |
Details | CARBOHYD: N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | ASN328 | |
B | ASN328 | |
C | ASN328 | |
D | ASN328 |
site_id | SWS_FT_FI12 |
Number of Residues | 8 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:27768895, ECO:0000269|PubMed:27991905, ECO:0000269|PubMed:28092368 |
Chain | Residue | Details |
A | ASN362 | |
A | ASN375 | |
B | ASN362 | |
B | ASN375 | |
C | ASN362 | |
C | ASN375 | |
D | ASN362 | |
D | ASN375 |