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8E96

Glycine and glutamate bound Human GluN1a-GluN2D NMDA receptor

Functional Information from GO Data
ChainGOidnamespacecontents
A0001540molecular_functionamyloid-beta binding
A0004972molecular_functionNMDA glutamate receptor activity
A0005216molecular_functionmonoatomic ion channel activity
A0005262molecular_functioncalcium channel activity
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0005516molecular_functioncalmodulin binding
A0005737cellular_componentcytoplasm
A0005789cellular_componentendoplasmic reticulum membrane
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0006812biological_processmonoatomic cation transport
A0007215biological_processglutamate receptor signaling pathway
A0007268biological_processchemical synaptic transmission
A0007420biological_processbrain development
A0008021cellular_componentsynaptic vesicle
A0008542biological_processvisual learning
A0009986cellular_componentcell surface
A0010524biological_processpositive regulation of calcium ion transport into cytosol
A0014069cellular_componentpostsynaptic density
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
A0016594molecular_functionglycine binding
A0016595molecular_functionglutamate binding
A0017146cellular_componentNMDA selective glutamate receptor complex
A0018964biological_processpropylene metabolic process
A0019722biological_processcalcium-mediated signaling
A0022824molecular_functiontransmitter-gated monoatomic ion channel activity
A0022849molecular_functionglutamate-gated calcium ion channel activity
A0030425cellular_componentdendrite
A0031090cellular_componentorganelle membrane
A0034220biological_processmonoatomic ion transmembrane transport
A0035235biological_processionotropic glutamate receptor signaling pathway
A0038023molecular_functionsignaling receptor activity
A0042391biological_processregulation of membrane potential
A0043005cellular_componentneuron projection
A0043083cellular_componentsynaptic cleft
A0043195cellular_componentterminal bouton
A0043197cellular_componentdendritic spine
A0044877molecular_functionprotein-containing complex binding
A0045202cellular_componentsynapse
A0045211cellular_componentpostsynaptic membrane
A0045471biological_processresponse to ethanol
A0045944biological_processpositive regulation of transcription by RNA polymerase II
A0048167biological_processregulation of synaptic plasticity
A0048168biological_processregulation of neuronal synaptic plasticity
A0051290biological_processprotein heterotetramerization
A0051968biological_processpositive regulation of synaptic transmission, glutamatergic
A0055074biological_processcalcium ion homeostasis
A0060076cellular_componentexcitatory synapse
A0060079biological_processexcitatory postsynaptic potential
A0097060cellular_componentsynaptic membrane
A0097553biological_processcalcium ion transmembrane import into cytosol
A0098655biological_processmonoatomic cation transmembrane transport
A0098976biological_processexcitatory chemical synaptic transmission
A1903428biological_processpositive regulation of reactive oxygen species biosynthetic process
A1904062biological_processregulation of monoatomic cation transmembrane transport
A1904646biological_processcellular response to amyloid-beta
A1905429biological_processresponse to glycine
A2000463biological_processpositive regulation of excitatory postsynaptic potential
B0005216molecular_functionmonoatomic ion channel activity
B0006811biological_processmonoatomic ion transport
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
B0038023molecular_functionsignaling receptor activity
C0001540molecular_functionamyloid-beta binding
C0004972molecular_functionNMDA glutamate receptor activity
C0005216molecular_functionmonoatomic ion channel activity
C0005262molecular_functioncalcium channel activity
C0005509molecular_functioncalcium ion binding
C0005515molecular_functionprotein binding
C0005516molecular_functioncalmodulin binding
C0005737cellular_componentcytoplasm
C0005789cellular_componentendoplasmic reticulum membrane
C0005886cellular_componentplasma membrane
C0006811biological_processmonoatomic ion transport
C0006812biological_processmonoatomic cation transport
C0007215biological_processglutamate receptor signaling pathway
C0007268biological_processchemical synaptic transmission
C0007420biological_processbrain development
C0008021cellular_componentsynaptic vesicle
C0008542biological_processvisual learning
C0009986cellular_componentcell surface
C0010524biological_processpositive regulation of calcium ion transport into cytosol
C0014069cellular_componentpostsynaptic density
C0015276molecular_functionligand-gated monoatomic ion channel activity
C0016020cellular_componentmembrane
C0016594molecular_functionglycine binding
C0016595molecular_functionglutamate binding
C0017146cellular_componentNMDA selective glutamate receptor complex
C0018964biological_processpropylene metabolic process
C0019722biological_processcalcium-mediated signaling
C0022824molecular_functiontransmitter-gated monoatomic ion channel activity
C0022849molecular_functionglutamate-gated calcium ion channel activity
C0030425cellular_componentdendrite
C0031090cellular_componentorganelle membrane
C0034220biological_processmonoatomic ion transmembrane transport
C0035235biological_processionotropic glutamate receptor signaling pathway
C0038023molecular_functionsignaling receptor activity
C0042391biological_processregulation of membrane potential
C0043005cellular_componentneuron projection
C0043083cellular_componentsynaptic cleft
C0043195cellular_componentterminal bouton
C0043197cellular_componentdendritic spine
C0044877molecular_functionprotein-containing complex binding
C0045202cellular_componentsynapse
C0045211cellular_componentpostsynaptic membrane
C0045471biological_processresponse to ethanol
C0045944biological_processpositive regulation of transcription by RNA polymerase II
C0048167biological_processregulation of synaptic plasticity
C0048168biological_processregulation of neuronal synaptic plasticity
C0051290biological_processprotein heterotetramerization
C0051968biological_processpositive regulation of synaptic transmission, glutamatergic
C0055074biological_processcalcium ion homeostasis
C0060076cellular_componentexcitatory synapse
C0060079biological_processexcitatory postsynaptic potential
C0097060cellular_componentsynaptic membrane
C0097553biological_processcalcium ion transmembrane import into cytosol
C0098655biological_processmonoatomic cation transmembrane transport
C0098976biological_processexcitatory chemical synaptic transmission
C1903428biological_processpositive regulation of reactive oxygen species biosynthetic process
C1904062biological_processregulation of monoatomic cation transmembrane transport
C1904646biological_processcellular response to amyloid-beta
C1905429biological_processresponse to glycine
C2000463biological_processpositive regulation of excitatory postsynaptic potential
D0005216molecular_functionmonoatomic ion channel activity
D0006811biological_processmonoatomic ion transport
D0015276molecular_functionligand-gated monoatomic ion channel activity
D0016020cellular_componentmembrane
D0038023molecular_functionsignaling receptor activity
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1452
DetailsTOPO_DOM: Extracellular => ECO:0000250|UniProtKB:Q00960
ChainResidueDetails
BPHE28-ALA584
BTHR674-ASN844
DPHE28-ALA584
DTHR674-ASN844

site_idSWS_FT_FI2
Number of Residues104
DetailsTRANSMEM: Helical => ECO:0000250|UniProtKB:Q00960
ChainResidueDetails
BVAL585-ILE603
BMET658-TYR673
BMET845-ALA864
DVAL585-ILE603
DMET658-TYR673
DMET845-ALA864

site_idSWS_FT_FI3
Number of Residues64
DetailsTOPO_DOM: Cytoplasmic => ECO:0000250|UniProtKB:Q00960
ChainResidueDetails
BPHE604-GLY630
BARG651-ILE657
DPHE604-GLY630
DARG651-ILE657

site_idSWS_FT_FI4
Number of Residues38
DetailsINTRAMEM: Discontinuously helical => ECO:0000250|UniProtKB:Q00960
ChainResidueDetails
BLYS631-PRO650
DLYS631-PRO650

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q00959
ChainResidueDetails
BSER539
BSER717
DSER539
DSER717
CPRO516
CARG523
CSER688
CASP732

site_idSWS_FT_FI6
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q00960
ChainResidueDetails
BTHR541
AASN491
AASN674
AASN771
CASN61
CASN203
CASN239
CASN276
CASN300
CASN350
CASN368
BARG546
CASN440
CASN471
CASN491
CASN674
CASN771
BASP759
DTHR541
DARG546
DASP759
AASN368
AASN440
AASN471

site_idSWS_FT_FI7
Number of Residues2
DetailsSITE: Functional determinant of NMDA receptors => ECO:0000250
ChainResidueDetails
BASN642
DASN642

site_idSWS_FT_FI8
Number of Residues14
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
BASN92
DASN366
DASN384
DASN467
DASN569
DASN715
BASN352
BASN366
BASN384
BASN467
BASN569
BASN715
DASN92
DASN352

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PDB entries from 2024-07-10

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