| Chain | GOid | namespace | contents |
| B | 0000209 | biological_process | protein polyubiquitination |
| B | 0000785 | cellular_component | chromatin |
| B | 0003723 | molecular_function | RNA binding |
| B | 0004842 | molecular_function | ubiquitin-protein transferase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006281 | biological_process | DNA repair |
| B | 0006974 | biological_process | DNA damage response |
| B | 0006979 | biological_process | response to oxidative stress |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0010498 | biological_process | proteasomal protein catabolic process |
| B | 0010628 | biological_process | positive regulation of gene expression |
| B | 0016020 | cellular_component | membrane |
| B | 0016567 | biological_process | protein ubiquitination |
| B | 0016740 | molecular_function | transferase activity |
| B | 0030520 | biological_process | estrogen receptor signaling pathway |
| B | 0032991 | cellular_component | protein-containing complex |
| B | 0033696 | biological_process | heterochromatin boundary formation |
| B | 0034450 | molecular_function | ubiquitin-ubiquitin ligase activity |
| B | 0035519 | biological_process | protein K29-linked ubiquitination |
| B | 0042307 | biological_process | positive regulation of protein import into nucleus |
| B | 0043130 | molecular_function | ubiquitin binding |
| B | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| B | 0045879 | biological_process | negative regulation of smoothened signaling pathway |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0048384 | biological_process | retinoic acid receptor signaling pathway |
| B | 0048471 | cellular_component | perinuclear region of cytoplasm |
| B | 0050847 | biological_process | progesterone receptor signaling pathway |
| B | 0061630 | molecular_function | ubiquitin protein ligase activity |
| B | 0070561 | biological_process | vitamin D receptor signaling pathway |
| B | 0070936 | biological_process | protein K48-linked ubiquitination |
| B | 0070979 | biological_process | protein K11-linked ubiquitination |
| B | 0071629 | biological_process | cytoplasm protein quality control by the ubiquitin-proteasome system |
| B | 0071630 | biological_process | nuclear protein quality control by the ubiquitin-proteasome system |
| B | 0090263 | biological_process | positive regulation of canonical Wnt signaling pathway |
| B | 0140455 | biological_process | cytoplasm protein quality control |
| B | 0140861 | biological_process | DNA repair-dependent chromatin remodeling |
| B | 0141198 | biological_process | protein branched polyubiquitination |
| J | 0000209 | biological_process | protein polyubiquitination |
| J | 0000785 | cellular_component | chromatin |
| J | 0003723 | molecular_function | RNA binding |
| J | 0004842 | molecular_function | ubiquitin-protein transferase activity |
| J | 0005515 | molecular_function | protein binding |
| J | 0005634 | cellular_component | nucleus |
| J | 0005654 | cellular_component | nucleoplasm |
| J | 0005737 | cellular_component | cytoplasm |
| J | 0005829 | cellular_component | cytosol |
| J | 0006281 | biological_process | DNA repair |
| J | 0006974 | biological_process | DNA damage response |
| J | 0006979 | biological_process | response to oxidative stress |
| J | 0008270 | molecular_function | zinc ion binding |
| J | 0010498 | biological_process | proteasomal protein catabolic process |
| J | 0010628 | biological_process | positive regulation of gene expression |
| J | 0016020 | cellular_component | membrane |
| J | 0016567 | biological_process | protein ubiquitination |
| J | 0016740 | molecular_function | transferase activity |
| J | 0030520 | biological_process | estrogen receptor signaling pathway |
| J | 0032991 | cellular_component | protein-containing complex |
| J | 0033696 | biological_process | heterochromatin boundary formation |
| J | 0034450 | molecular_function | ubiquitin-ubiquitin ligase activity |
| J | 0035519 | biological_process | protein K29-linked ubiquitination |
| J | 0042307 | biological_process | positive regulation of protein import into nucleus |
| J | 0043130 | molecular_function | ubiquitin binding |
| J | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| J | 0045879 | biological_process | negative regulation of smoothened signaling pathway |
| J | 0046872 | molecular_function | metal ion binding |
| J | 0048384 | biological_process | retinoic acid receptor signaling pathway |
| J | 0048471 | cellular_component | perinuclear region of cytoplasm |
| J | 0050847 | biological_process | progesterone receptor signaling pathway |
| J | 0061630 | molecular_function | ubiquitin protein ligase activity |
| J | 0070561 | biological_process | vitamin D receptor signaling pathway |
| J | 0070936 | biological_process | protein K48-linked ubiquitination |
| J | 0070979 | biological_process | protein K11-linked ubiquitination |
| J | 0071629 | biological_process | cytoplasm protein quality control by the ubiquitin-proteasome system |
| J | 0071630 | biological_process | nuclear protein quality control by the ubiquitin-proteasome system |
| J | 0090263 | biological_process | positive regulation of canonical Wnt signaling pathway |
| J | 0140455 | biological_process | cytoplasm protein quality control |
| J | 0140861 | biological_process | DNA repair-dependent chromatin remodeling |
| J | 0141198 | biological_process | protein branched polyubiquitination |
