| Chain | GOid | namespace | contents |
| A | 0000118 | cellular_component | histone deacetylase complex |
| A | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| A | 0000781 | cellular_component | chromosome, telomeric region |
| A | 0000785 | cellular_component | chromatin |
| A | 0001975 | biological_process | response to amphetamine |
| A | 0003300 | biological_process | cardiac muscle hypertrophy |
| A | 0003682 | molecular_function | chromatin binding |
| A | 0003723 | molecular_function | RNA binding |
| A | 0004407 | molecular_function | histone deacetylase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006325 | biological_process | chromatin organization |
| A | 0006338 | biological_process | chromatin remodeling |
| A | 0008284 | biological_process | positive regulation of cell population proliferation |
| A | 0009410 | biological_process | response to xenobiotic stimulus |
| A | 0009913 | biological_process | epidermal cell differentiation |
| A | 0010718 | biological_process | positive regulation of epithelial to mesenchymal transition |
| A | 0010944 | biological_process | negative regulation of transcription by competitive promoter binding |
| A | 0010977 | biological_process | negative regulation of neuron projection development |
| A | 0016358 | biological_process | dendrite development |
| A | 0016581 | cellular_component | NuRD complex |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0019213 | molecular_function | deacetylase activity |
| A | 0019899 | molecular_function | enzyme binding |
| A | 0030336 | biological_process | negative regulation of cell migration |
| A | 0030512 | biological_process | negative regulation of transforming growth factor beta receptor signaling pathway |
| A | 0031000 | biological_process | response to caffeine |
| A | 0031072 | molecular_function | heat shock protein binding |
| A | 0031078 | molecular_function | histone H3K14 deacetylase activity, hydrolytic mechanism |
| A | 0031492 | molecular_function | nucleosomal DNA binding |
| A | 0031507 | biological_process | heterochromatin formation |
| A | 0032129 | molecular_function | histone H3K9 deacetylase activity, hydrolytic mechanism |
| A | 0032496 | biological_process | response to lipopolysaccharide |
| A | 0032732 | biological_process | positive regulation of interleukin-1 production |
| A | 0032760 | biological_process | positive regulation of tumor necrosis factor production |
| A | 0032922 | biological_process | circadian regulation of gene expression |
| A | 0032967 | biological_process | positive regulation of collagen biosynthetic process |
| A | 0032991 | cellular_component | protein-containing complex |
| A | 0033558 | molecular_function | protein lysine deacetylase activity |
| A | 0034605 | biological_process | cellular response to heat |
| A | 0034739 | molecular_function | histone H4K16 deacetylase activity, hydrolytic mechanism |
| A | 0035094 | biological_process | response to nicotine |
| A | 0035098 | cellular_component | ESC/E(Z) complex |
| A | 0036211 | biological_process | protein modification process |
| A | 0042220 | biological_process | response to cocaine |
| A | 0042393 | molecular_function | histone binding |
| A | 0042475 | biological_process | odontogenesis of dentin-containing tooth |
| A | 0042659 | biological_process | regulation of cell fate specification |
| A | 0042733 | biological_process | embryonic digit morphogenesis |
| A | 0042826 | molecular_function | histone deacetylase binding |
| A | 0042903 | molecular_function | tubulin deacetylase activity |
| A | 0043066 | biological_process | negative regulation of apoptotic process |
| A | 0043433 | biological_process | negative regulation of DNA-binding transcription factor activity |
| A | 0045347 | biological_process | negative regulation of MHC class II biosynthetic process |
| A | 0045862 | biological_process | positive regulation of proteolysis |
| A | 0045892 | biological_process | negative regulation of DNA-templated transcription |
| A | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| A | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| A | 0048149 | biological_process | behavioral response to ethanol |
| A | 0048511 | biological_process | rhythmic process |
| A | 0048714 | biological_process | positive regulation of oligodendrocyte differentiation |
| A | 0051059 | molecular_function | NF-kappaB binding |
| A | 0055093 | biological_process | response to hyperoxia |
| A | 0060789 | biological_process | hair follicle placode formation |
| A | 0061000 | biological_process | negative regulation of dendritic spine development |
| A | 0061029 | biological_process | eyelid development in camera-type eye |
| A | 0061198 | biological_process | fungiform papilla formation |
| A | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| A | 0070301 | biological_process | cellular response to hydrogen peroxide |
| A | 0070822 | cellular_component | Sin3-type complex |
| A | 0071300 | biological_process | cellular response to retinoic acid |
| A | 0071560 | biological_process | cellular response to transforming growth factor beta stimulus |
| A | 0097305 | biological_process | response to alcohol |
| A | 0140297 | molecular_function | DNA-binding transcription factor binding |
| A | 0140937 | molecular_function | histone H4K12 deacetylase activity, hydrolytic mechanism |
| A | 0160008 | molecular_function | protein decrotonylase activity |
| A | 0160009 | molecular_function | histone decrotonylase activity |
| A | 0160010 | molecular_function | protein de-2-hydroxyisobutyrylase activity |
| A | 0160216 | molecular_function | protein lysine delactylase activity |
| A | 0180032 | molecular_function | histone H4K5 deacetylase activity, hydrolytic mechanism |
| A | 0180033 | molecular_function | histone H4K8 deacetylase activity, hydrolytic mechanism |
| A | 1902437 | biological_process | positive regulation of male mating behavior |
| A | 1902455 | biological_process | negative regulation of stem cell population maintenance |
| A | 1902459 | biological_process | positive regulation of stem cell population maintenance |
| A | 1903351 | biological_process | cellular response to dopamine |
| A | 1904645 | biological_process | response to amyloid-beta |
| A | 1990162 | molecular_function | histone H3K4 deacetylase activity, hydrolytic mechanism |
| A | 1990841 | molecular_function | promoter-specific chromatin binding |
| A | 2000273 | biological_process | positive regulation of signaling receptor activity |
| A | 2000736 | biological_process | regulation of stem cell differentiation |
| A | 2000757 | biological_process | negative regulation of peptidyl-lysine acetylation |
| B | 0000118 | cellular_component | histone deacetylase complex |
| B | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| B | 0000781 | cellular_component | chromosome, telomeric region |
| B | 0000785 | cellular_component | chromatin |
| B | 0001975 | biological_process | response to amphetamine |
| B | 0003300 | biological_process | cardiac muscle hypertrophy |
| B | 0003682 | molecular_function | chromatin binding |
| B | 0003723 | molecular_function | RNA binding |
| B | 0004407 | molecular_function | histone deacetylase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006325 | biological_process | chromatin organization |
| B | 0006338 | biological_process | chromatin remodeling |
| B | 0008284 | biological_process | positive regulation of cell population proliferation |
| B | 0009410 | biological_process | response to xenobiotic stimulus |
| B | 0009913 | biological_process | epidermal cell differentiation |
| B | 0010718 | biological_process | positive regulation of epithelial to mesenchymal transition |
| B | 0010944 | biological_process | negative regulation of transcription by competitive promoter binding |
| B | 0010977 | biological_process | negative regulation of neuron projection development |
| B | 0016358 | biological_process | dendrite development |
| B | 0016581 | cellular_component | NuRD complex |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0019213 | molecular_function | deacetylase activity |
| B | 0019899 | molecular_function | enzyme binding |
| B | 0030336 | biological_process | negative regulation of cell migration |
| B | 0030512 | biological_process | negative regulation of transforming growth factor beta receptor signaling pathway |
| B | 0031000 | biological_process | response to caffeine |
| B | 0031072 | molecular_function | heat shock protein binding |
| B | 0031078 | molecular_function | histone H3K14 deacetylase activity, hydrolytic mechanism |
| B | 0031492 | molecular_function | nucleosomal DNA binding |
| B | 0031507 | biological_process | heterochromatin formation |
| B | 0032129 | molecular_function | histone H3K9 deacetylase activity, hydrolytic mechanism |
| B | 0032496 | biological_process | response to lipopolysaccharide |
| B | 0032732 | biological_process | positive regulation of interleukin-1 production |
| B | 0032760 | biological_process | positive regulation of tumor necrosis factor production |
| B | 0032922 | biological_process | circadian regulation of gene expression |
| B | 0032967 | biological_process | positive regulation of collagen biosynthetic process |
| B | 0032991 | cellular_component | protein-containing complex |
| B | 0033558 | molecular_function | protein lysine deacetylase activity |
| B | 0034605 | biological_process | cellular response to heat |
| B | 0034739 | molecular_function | histone H4K16 deacetylase activity, hydrolytic mechanism |
| B | 0035094 | biological_process | response to nicotine |
| B | 0035098 | cellular_component | ESC/E(Z) complex |
| B | 0036211 | biological_process | protein modification process |
| B | 0042220 | biological_process | response to cocaine |
| B | 0042393 | molecular_function | histone binding |
| B | 0042475 | biological_process | odontogenesis of dentin-containing tooth |
| B | 0042659 | biological_process | regulation of cell fate specification |
| B | 0042733 | biological_process | embryonic digit morphogenesis |
| B | 0042826 | molecular_function | histone deacetylase binding |
| B | 0042903 | molecular_function | tubulin deacetylase activity |
| B | 0043066 | biological_process | negative regulation of apoptotic process |
| B | 0043433 | biological_process | negative regulation of DNA-binding transcription factor activity |
| B | 0045347 | biological_process | negative regulation of MHC class II biosynthetic process |
| B | 0045862 | biological_process | positive regulation of proteolysis |
| B | 0045892 | biological_process | negative regulation of DNA-templated transcription |
| B | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| B | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| B | 0048149 | biological_process | behavioral response to ethanol |
| B | 0048511 | biological_process | rhythmic process |
| B | 0048714 | biological_process | positive regulation of oligodendrocyte differentiation |
| B | 0051059 | molecular_function | NF-kappaB binding |
| B | 0055093 | biological_process | response to hyperoxia |
| B | 0060789 | biological_process | hair follicle placode formation |
| B | 0061000 | biological_process | negative regulation of dendritic spine development |
| B | 0061029 | biological_process | eyelid development in camera-type eye |
| B | 0061198 | biological_process | fungiform papilla formation |
| B | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| B | 0070301 | biological_process | cellular response to hydrogen peroxide |
| B | 0070822 | cellular_component | Sin3-type complex |
| B | 0071300 | biological_process | cellular response to retinoic acid |
| B | 0071560 | biological_process | cellular response to transforming growth factor beta stimulus |
| B | 0097305 | biological_process | response to alcohol |
| B | 0140297 | molecular_function | DNA-binding transcription factor binding |
| B | 0140937 | molecular_function | histone H4K12 deacetylase activity, hydrolytic mechanism |
| B | 0160008 | molecular_function | protein decrotonylase activity |
| B | 0160009 | molecular_function | histone decrotonylase activity |
| B | 0160010 | molecular_function | protein de-2-hydroxyisobutyrylase activity |
| B | 0160216 | molecular_function | protein lysine delactylase activity |
| B | 0180032 | molecular_function | histone H4K5 deacetylase activity, hydrolytic mechanism |
| B | 0180033 | molecular_function | histone H4K8 deacetylase activity, hydrolytic mechanism |
| B | 1902437 | biological_process | positive regulation of male mating behavior |
| B | 1902455 | biological_process | negative regulation of stem cell population maintenance |
| B | 1902459 | biological_process | positive regulation of stem cell population maintenance |
| B | 1903351 | biological_process | cellular response to dopamine |
| B | 1904645 | biological_process | response to amyloid-beta |
| B | 1990162 | molecular_function | histone H3K4 deacetylase activity, hydrolytic mechanism |
| B | 1990841 | molecular_function | promoter-specific chromatin binding |
| B | 2000273 | biological_process | positive regulation of signaling receptor activity |
| B | 2000736 | biological_process | regulation of stem cell differentiation |
| B | 2000757 | biological_process | negative regulation of peptidyl-lysine acetylation |
| C | 0000118 | cellular_component | histone deacetylase complex |
| C | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| C | 0000781 | cellular_component | chromosome, telomeric region |
| C | 0000785 | cellular_component | chromatin |
| C | 0001975 | biological_process | response to amphetamine |
| C | 0003300 | biological_process | cardiac muscle hypertrophy |
| C | 0003682 | molecular_function | chromatin binding |
| C | 0003723 | molecular_function | RNA binding |
| C | 0004407 | molecular_function | histone deacetylase activity |
| C | 0005515 | molecular_function | protein binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006325 | biological_process | chromatin organization |
| C | 0006338 | biological_process | chromatin remodeling |
| C | 0008284 | biological_process | positive regulation of cell population proliferation |
| C | 0009410 | biological_process | response to xenobiotic stimulus |
| C | 0009913 | biological_process | epidermal cell differentiation |
| C | 0010718 | biological_process | positive regulation of epithelial to mesenchymal transition |
| C | 0010944 | biological_process | negative regulation of transcription by competitive promoter binding |
| C | 0010977 | biological_process | negative regulation of neuron projection development |
| C | 0016358 | biological_process | dendrite development |
| C | 0016581 | cellular_component | NuRD complex |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0019213 | molecular_function | deacetylase activity |
| C | 0019899 | molecular_function | enzyme binding |
| C | 0030336 | biological_process | negative regulation of cell migration |
| C | 0030512 | biological_process | negative regulation of transforming growth factor beta receptor signaling pathway |
| C | 0031000 | biological_process | response to caffeine |
| C | 0031072 | molecular_function | heat shock protein binding |
| C | 0031078 | molecular_function | histone H3K14 deacetylase activity, hydrolytic mechanism |
| C | 0031492 | molecular_function | nucleosomal DNA binding |
| C | 0031507 | biological_process | heterochromatin formation |
| C | 0032129 | molecular_function | histone H3K9 deacetylase activity, hydrolytic mechanism |
| C | 0032496 | biological_process | response to lipopolysaccharide |
| C | 0032732 | biological_process | positive regulation of interleukin-1 production |
| C | 0032760 | biological_process | positive regulation of tumor necrosis factor production |
| C | 0032922 | biological_process | circadian regulation of gene expression |
| C | 0032967 | biological_process | positive regulation of collagen biosynthetic process |
| C | 0032991 | cellular_component | protein-containing complex |
| C | 0033558 | molecular_function | protein lysine deacetylase activity |
| C | 0034605 | biological_process | cellular response to heat |
| C | 0034739 | molecular_function | histone H4K16 deacetylase activity, hydrolytic mechanism |
| C | 0035094 | biological_process | response to nicotine |
| C | 0035098 | cellular_component | ESC/E(Z) complex |
| C | 0036211 | biological_process | protein modification process |
| C | 0042220 | biological_process | response to cocaine |
| C | 0042393 | molecular_function | histone binding |
| C | 0042475 | biological_process | odontogenesis of dentin-containing tooth |
| C | 0042659 | biological_process | regulation of cell fate specification |
| C | 0042733 | biological_process | embryonic digit morphogenesis |
| C | 0042826 | molecular_function | histone deacetylase binding |
| C | 0042903 | molecular_function | tubulin deacetylase activity |
| C | 0043066 | biological_process | negative regulation of apoptotic process |
| C | 0043433 | biological_process | negative regulation of DNA-binding transcription factor activity |
| C | 0045347 | biological_process | negative regulation of MHC class II biosynthetic process |
| C | 0045862 | biological_process | positive regulation of proteolysis |
| C | 0045892 | biological_process | negative regulation of DNA-templated transcription |
| C | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| C | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| C | 0048149 | biological_process | behavioral response to ethanol |
| C | 0048511 | biological_process | rhythmic process |
| C | 0048714 | biological_process | positive regulation of oligodendrocyte differentiation |
| C | 0051059 | molecular_function | NF-kappaB binding |
| C | 0055093 | biological_process | response to hyperoxia |
| C | 0060789 | biological_process | hair follicle placode formation |
| C | 0061000 | biological_process | negative regulation of dendritic spine development |
| C | 0061029 | biological_process | eyelid development in camera-type eye |
| C | 0061198 | biological_process | fungiform papilla formation |
| C | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| C | 0070301 | biological_process | cellular response to hydrogen peroxide |
| C | 0070822 | cellular_component | Sin3-type complex |
| C | 0071300 | biological_process | cellular response to retinoic acid |
| C | 0071560 | biological_process | cellular response to transforming growth factor beta stimulus |
| C | 0097305 | biological_process | response to alcohol |
| C | 0140297 | molecular_function | DNA-binding transcription factor binding |
| C | 0140937 | molecular_function | histone H4K12 deacetylase activity, hydrolytic mechanism |
| C | 0160008 | molecular_function | protein decrotonylase activity |
| C | 0160009 | molecular_function | histone decrotonylase activity |
| C | 0160010 | molecular_function | protein de-2-hydroxyisobutyrylase activity |
| C | 0160216 | molecular_function | protein lysine delactylase activity |
| C | 0180032 | molecular_function | histone H4K5 deacetylase activity, hydrolytic mechanism |
| C | 0180033 | molecular_function | histone H4K8 deacetylase activity, hydrolytic mechanism |
| C | 1902437 | biological_process | positive regulation of male mating behavior |
| C | 1902455 | biological_process | negative regulation of stem cell population maintenance |
| C | 1902459 | biological_process | positive regulation of stem cell population maintenance |
| C | 1903351 | biological_process | cellular response to dopamine |
| C | 1904645 | biological_process | response to amyloid-beta |
| C | 1990162 | molecular_function | histone H3K4 deacetylase activity, hydrolytic mechanism |
| C | 1990841 | molecular_function | promoter-specific chromatin binding |
| C | 2000273 | biological_process | positive regulation of signaling receptor activity |
| C | 2000736 | biological_process | regulation of stem cell differentiation |
| C | 2000757 | biological_process | negative regulation of peptidyl-lysine acetylation |
