7ZIR
Cryo-EM structure of hnRNPDL amyloid fibrils
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003723 | molecular_function | RNA binding |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0003723 | molecular_function | RNA binding |
| C | 0003676 | molecular_function | nucleic acid binding |
| C | 0003723 | molecular_function | RNA binding |
| D | 0003676 | molecular_function | nucleic acid binding |
| D | 0003723 | molecular_function | RNA binding |
| E | 0003676 | molecular_function | nucleic acid binding |
| E | 0003723 | molecular_function | RNA binding |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 5 |
| Details | MOD_RES: N6-methyllysine => ECO:0000269|Ref.9 |
| Chain | Residue | Details |
| C | LYS161 | |
| A | LYS161 | |
| E | LYS161 | |
| D | LYS161 | |
| B | LYS161 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 5 |
| Details | MOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861 |
| Chain | Residue | Details |
| C | LYS216 | |
| A | LYS216 | |
| E | LYS216 | |
| D | LYS216 | |
| B | LYS216 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 5 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569 |
| Chain | Residue | Details |
| C | SER241 | |
| A | SER241 | |
| E | SER241 | |
| D | SER241 | |
| B | SER241 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 5 |
| Details | MOD_RES: Omega-N-methylarginine; alternate => ECO:0000250|UniProtKB:Q9Z130 |
| Chain | Residue | Details |
| C | ARG408 | |
| A | ARG408 | |
| E | ARG408 | |
| D | ARG408 | |
| B | ARG408 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 10 |
| Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733 |
| Chain | Residue | Details |
| C | LYS209 | |
| A | LYS209 | |
| E | LYS209 | |
| D | LYS209 | |
| B | LYS209 |
