7RHK
Cryo-EM structure of human rod CNGA1/B1 channel in L-cis-Diltiazem-trapped closed state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005216 | molecular_function | monoatomic ion channel activity |
A | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
A | 0006811 | biological_process | monoatomic ion transport |
A | 0016020 | cellular_component | membrane |
A | 0055085 | biological_process | transmembrane transport |
B | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
C | 0005216 | molecular_function | monoatomic ion channel activity |
C | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
C | 0006811 | biological_process | monoatomic ion transport |
C | 0016020 | cellular_component | membrane |
C | 0055085 | biological_process | transmembrane transport |
D | 0005216 | molecular_function | monoatomic ion channel activity |
D | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
D | 0006811 | biological_process | monoatomic ion transport |
D | 0016020 | cellular_component | membrane |
D | 0055085 | biological_process | transmembrane transport |
Functional Information from PROSITE/UniProt
site_id | PS00888 |
Number of Residues | 17 |
Details | CNMP_BINDING_1 Cyclic nucleotide-binding domain signature 1. VCkKGEiGReMYIIqaG |
Chain | Residue | Details |
B | VAL989-GLY1005 | |
C | ILE506-GLY522 |
site_id | PS00889 |
Number of Residues | 21 |
Details | CNMP_BINDING_2 Cyclic nucleotide-binding domain signature 2. FGEiSLlavgggnr...RTAnVvA |
Chain | Residue | Details |
B | PHE1028-ALA1048 | |
C | PHE544-SER567 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 84 |
Details | Transmembrane: {"description":"Helical; Name=S1","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RH9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 113 |
Details | Topological domain: {"description":"Extracellular","evidences":[{"evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 81 |
Details | Transmembrane: {"description":"Helical; Name=S2","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RH9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 115 |
Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 73 |
Details | Transmembrane: {"description":"Helical; Name=S3","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RH9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 66 |
Details | Transmembrane: {"description":"Helical; Name=S4","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RH9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 91 |
Details | Transmembrane: {"description":"Helical; Name=S5","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RH9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 128 |
Details | Transmembrane: {"description":"Helical; Name=P-helix","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RH9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 97 |
Details | Transmembrane: {"description":"Helical; Name=S6","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RH9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 324 |
Details | Region: {"description":"Ion conduction pathway","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 9 |
Details | Region: {"description":"Selectivity filter","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 304 |
Details | Region: {"description":"C-linker","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 476 |
Details | Region: {"description":"Cyclic nucleotide-binding domain","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7RHI","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 13 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHH","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 8 |
Details | Site: {"description":"Central gate","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 3 |
Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"UniProtKB","id":"Q00194","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHI","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7RHI","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 1 |
Details | Site: {"description":"Occludes the pore below the central gate","evidences":[{"source":"PubMed","id":"34699778","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |