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7NPI

Crystal structure of Mindy2 (C266A) in complex with Lys48-linked penta-ubiquitin (K48-Ub5)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004843molecular_functioncysteine-type deubiquitinase activity
A1990380molecular_functionK48-linked deubiquitinase activity
e0004843molecular_functioncysteine-type deubiquitinase activity
e1990380molecular_functionK48-linked deubiquitinase activity
G0004843molecular_functioncysteine-type deubiquitinase activity
G1990380molecular_functionK48-linked deubiquitinase activity
k0004843molecular_functioncysteine-type deubiquitinase activity
k1990380molecular_functionK48-linked deubiquitinase activity
M0004843molecular_functioncysteine-type deubiquitinase activity
M1990380molecular_functionK48-linked deubiquitinase activity
S0004843molecular_functioncysteine-type deubiquitinase activity
S1990380molecular_functionK48-linked deubiquitinase activity
Y0004843molecular_functioncysteine-type deubiquitinase activity
Y1990380molecular_functionK48-linked deubiquitinase activity
Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
aLYS27-ASP52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues7
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"UniProtKB","id":"Q8N5J2","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues7
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"UniProtKB","id":"Q8N5J2","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1500
DetailsDomain: {"description":"Ubiquitin-like 9","evidences":[{"source":"PROSITE-ProRule","id":"PRU00214","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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