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7NHL

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
00000166molecular_functionnucleotide binding
00005524molecular_functionATP binding
00016887molecular_functionATP hydrolysis activity
10003735molecular_functionstructural constituent of ribosome
10005840cellular_componentribosome
10006412biological_processtranslation
11990904cellular_componentribonucleoprotein complex
20003735molecular_functionstructural constituent of ribosome
20005840cellular_componentribosome
20006412biological_processtranslation
20022625cellular_componentcytosolic large ribosomal subunit
21990904cellular_componentribonucleoprotein complex
30003735molecular_functionstructural constituent of ribosome
30005840cellular_componentribosome
30006412biological_processtranslation
30015934cellular_componentlarge ribosomal subunit
30022625cellular_componentcytosolic large ribosomal subunit
31990904cellular_componentribonucleoprotein complex
40003735molecular_functionstructural constituent of ribosome
40005840cellular_componentribosome
40006412biological_processtranslation
41990904cellular_componentribonucleoprotein complex
50003735molecular_functionstructural constituent of ribosome
50005840cellular_componentribosome
50006412biological_processtranslation
50015934cellular_componentlarge ribosomal subunit
51990904cellular_componentribonucleoprotein complex
60003735molecular_functionstructural constituent of ribosome
60005737cellular_componentcytoplasm
60005840cellular_componentribosome
60006412biological_processtranslation
60043229cellular_componentintracellular organelle
61990904cellular_componentribonucleoprotein complex
70003735molecular_functionstructural constituent of ribosome
70005840cellular_componentribosome
70006412biological_processtranslation
71990904cellular_componentribonucleoprotein complex
80003735molecular_functionstructural constituent of ribosome
80005840cellular_componentribosome
80006412biological_processtranslation
80022625cellular_componentcytosolic large ribosomal subunit
81990904cellular_componentribonucleoprotein complex
90003735molecular_functionstructural constituent of ribosome
90005737cellular_componentcytoplasm
90005840cellular_componentribosome
90006412biological_processtranslation
90043229cellular_componentintracellular organelle
91990904cellular_componentribonucleoprotein complex
G0002181biological_processcytoplasmic translation
G0003723molecular_functionRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0015934cellular_componentlarge ribosomal subunit
G0016740molecular_functiontransferase activity
G0019843molecular_functionrRNA binding
G0022625cellular_componentcytosolic large ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
H0003723molecular_functionRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0019843molecular_functionrRNA binding
H0022625cellular_componentcytosolic large ribosomal subunit
H1990904cellular_componentribonucleoprotein complex
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0019843molecular_functionrRNA binding
I1990904cellular_componentribonucleoprotein complex
J0000049molecular_functiontRNA binding
J0003723molecular_functionRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0019843molecular_functionrRNA binding
J0022625cellular_componentcytosolic large ribosomal subunit
J1990904cellular_componentribonucleoprotein complex
K0002181biological_processcytoplasmic translation
K0003723molecular_functionRNA binding
K0003735molecular_functionstructural constituent of ribosome
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0019843molecular_functionrRNA binding
K0022625cellular_componentcytosolic large ribosomal subunit
K1990904cellular_componentribonucleoprotein complex
M0003729molecular_functionmRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0005737cellular_componentcytoplasm
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0017148biological_processnegative regulation of translation
M0022625cellular_componentcytosolic large ribosomal subunit
M0043229cellular_componentintracellular organelle
M1990904cellular_componentribonucleoprotein complex
N0003723molecular_functionRNA binding
N0003735molecular_functionstructural constituent of ribosome
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0015934cellular_componentlarge ribosomal subunit
N0019843molecular_functionrRNA binding
N0022625cellular_componentcytosolic large ribosomal subunit
N0070180molecular_functionlarge ribosomal subunit rRNA binding
N1990904cellular_componentribonucleoprotein complex
O0003723molecular_functionRNA binding
O0003735molecular_functionstructural constituent of ribosome
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0015934cellular_componentlarge ribosomal subunit
O0019843molecular_functionrRNA binding
O0022625cellular_componentcytosolic large ribosomal subunit
O1990904cellular_componentribonucleoprotein complex
P0000049molecular_functiontRNA binding
P0003723molecular_functionRNA binding
P0003735molecular_functionstructural constituent of ribosome
P0005840cellular_componentribosome
P0006412biological_processtranslation
P0019843molecular_functionrRNA binding
P0022625cellular_componentcytosolic large ribosomal subunit
P1990904cellular_componentribonucleoprotein complex
Q0003735molecular_functionstructural constituent of ribosome
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0022625cellular_componentcytosolic large ribosomal subunit
Q1990904cellular_componentribonucleoprotein complex
R0003723molecular_functionRNA binding
R0003735molecular_functionstructural constituent of ribosome
R0005737cellular_componentcytoplasm
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0008097molecular_function5S rRNA binding
R0019843molecular_functionrRNA binding
R0022625cellular_componentcytosolic large ribosomal subunit
R0043229cellular_componentintracellular organelle
R1990904cellular_componentribonucleoprotein complex
S0003735molecular_functionstructural constituent of ribosome
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0022625cellular_componentcytosolic large ribosomal subunit
S1990904cellular_componentribonucleoprotein complex
T0003723molecular_functionRNA binding
T0003735molecular_functionstructural constituent of ribosome
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0019843molecular_functionrRNA binding
T0022625cellular_componentcytosolic large ribosomal subunit
T1990904cellular_componentribonucleoprotein complex
U0003723molecular_functionRNA binding
U0003735molecular_functionstructural constituent of ribosome
U0005737cellular_componentcytoplasm
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0019843molecular_functionrRNA binding
U0043229cellular_componentintracellular organelle
U1990904cellular_componentribonucleoprotein complex
V0003723molecular_functionRNA binding
V0003735molecular_functionstructural constituent of ribosome
V0005840cellular_componentribosome
V0006412biological_processtranslation
V0015934cellular_componentlarge ribosomal subunit
V0019843molecular_functionrRNA binding
V0022625cellular_componentcytosolic large ribosomal subunit
V1990904cellular_componentribonucleoprotein complex
W0003723molecular_functionRNA binding
W0003735molecular_functionstructural constituent of ribosome
W0005840cellular_componentribosome
W0006412biological_processtranslation
W0019843molecular_functionrRNA binding
W0022625cellular_componentcytosolic large ribosomal subunit
W1990904cellular_componentribonucleoprotein complex
X0003723molecular_functionRNA binding
X0003735molecular_functionstructural constituent of ribosome
X0005840cellular_componentribosome
X0006412biological_processtranslation
X0019843molecular_functionrRNA binding
X0022625cellular_componentcytosolic large ribosomal subunit
X1990904cellular_componentribonucleoprotein complex
Y0003723molecular_functionRNA binding
Y0003735molecular_functionstructural constituent of ribosome
Y0005840cellular_componentribosome
Y0006412biological_processtranslation
Y0008097molecular_function5S rRNA binding
Y0019843molecular_functionrRNA binding
Y0022625cellular_componentcytosolic large ribosomal subunit
Y1990904cellular_componentribonucleoprotein complex
Z0003735molecular_functionstructural constituent of ribosome
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0022625cellular_componentcytosolic large ribosomal subunit
Z1990904cellular_componentribonucleoprotein complex
c0003735molecular_functionstructural constituent of ribosome
c0005840cellular_componentribosome
c0006412biological_processtranslation
c0015935cellular_componentsmall ribosomal subunit
c0022627cellular_componentcytosolic small ribosomal subunit
c1990904cellular_componentribonucleoprotein complex
d0003676molecular_functionnucleic acid binding
d0003723molecular_functionRNA binding
d0003729molecular_functionmRNA binding
d0003735molecular_functionstructural constituent of ribosome
d0005840cellular_componentribosome
d0006412biological_processtranslation
d0019843molecular_functionrRNA binding
d0022627cellular_componentcytosolic small ribosomal subunit
d1990904cellular_componentribonucleoprotein complex
e0003723molecular_functionRNA binding
e0003735molecular_functionstructural constituent of ribosome
e0005840cellular_componentribosome
e0006412biological_processtranslation
e0015935cellular_componentsmall ribosomal subunit
e0019843molecular_functionrRNA binding
e0042274biological_processribosomal small subunit biogenesis
e1990904cellular_componentribonucleoprotein complex
f0003723molecular_functionRNA binding
f0003735molecular_functionstructural constituent of ribosome
f0005737cellular_componentcytoplasm
f0005840cellular_componentribosome
f0006412biological_processtranslation
f0015935cellular_componentsmall ribosomal subunit
f0019843molecular_functionrRNA binding
f0022627cellular_componentcytosolic small ribosomal subunit
f0043229cellular_componentintracellular organelle
f1990904cellular_componentribonucleoprotein complex
g0003723molecular_functionRNA binding
g0003735molecular_functionstructural constituent of ribosome
g0005737cellular_componentcytoplasm
g0005840cellular_componentribosome
g0006412biological_processtranslation
g0019843molecular_functionrRNA binding
g0022627cellular_componentcytosolic small ribosomal subunit
g0043229cellular_componentintracellular organelle
g0070181molecular_functionsmall ribosomal subunit rRNA binding
g1990904cellular_componentribonucleoprotein complex
h0000028biological_processribosomal small subunit assembly
h0000049molecular_functiontRNA binding
h0003723molecular_functionRNA binding
h0003729molecular_functionmRNA binding
h0003735molecular_functionstructural constituent of ribosome
h0005840cellular_componentribosome
h0006412biological_processtranslation
h0015935cellular_componentsmall ribosomal subunit
h0019843molecular_functionrRNA binding
h0022627cellular_componentcytosolic small ribosomal subunit
h1990904cellular_componentribonucleoprotein complex
i0003723molecular_functionRNA binding
i0003735molecular_functionstructural constituent of ribosome
i0005737cellular_componentcytoplasm
i0005840cellular_componentribosome
i0006412biological_processtranslation
i0019843molecular_functionrRNA binding
i0022627cellular_componentcytosolic small ribosomal subunit
i0043229cellular_componentintracellular organelle
i1990904cellular_componentribonucleoprotein complex
j0003723molecular_functionRNA binding
j0003735molecular_functionstructural constituent of ribosome
j0005737cellular_componentcytoplasm
j0005840cellular_componentribosome
j0006412biological_processtranslation
j0022627cellular_componentcytosolic small ribosomal subunit
j0043229cellular_componentintracellular organelle
j1990904cellular_componentribonucleoprotein complex
k0000049molecular_functiontRNA binding
k0003723molecular_functionRNA binding
k0003735molecular_functionstructural constituent of ribosome
k0005840cellular_componentribosome
k0006412biological_processtranslation
k0015935cellular_componentsmall ribosomal subunit
k1990904cellular_componentribonucleoprotein complex
l0003723molecular_functionRNA binding
l0003735molecular_functionstructural constituent of ribosome
l0005840cellular_componentribosome
l0006412biological_processtranslation
l0019843molecular_functionrRNA binding
l0022627cellular_componentcytosolic small ribosomal subunit
l1990904cellular_componentribonucleoprotein complex
m0000049molecular_functiontRNA binding
m0003723molecular_functionRNA binding
m0003735molecular_functionstructural constituent of ribosome
m0005840cellular_componentribosome
m0006412biological_processtranslation
m0015935cellular_componentsmall ribosomal subunit
m0019843molecular_functionrRNA binding
m1990904cellular_componentribonucleoprotein complex
n0000049molecular_functiontRNA binding
n0003676molecular_functionnucleic acid binding
n0003723molecular_functionRNA binding
n0003735molecular_functionstructural constituent of ribosome
n0005829cellular_componentcytosol
n0005840cellular_componentribosome
n0006412biological_processtranslation
n0015935cellular_componentsmall ribosomal subunit
n0019843molecular_functionrRNA binding
n1990904cellular_componentribonucleoprotein complex
o0003723molecular_functionRNA binding
o0003735molecular_functionstructural constituent of ribosome
o0005840cellular_componentribosome
o0006412biological_processtranslation
o0008270molecular_functionzinc ion binding
o0015935cellular_componentsmall ribosomal subunit
o0019843molecular_functionrRNA binding
o0046872molecular_functionmetal ion binding
o1990904cellular_componentribonucleoprotein complex
p0003723molecular_functionRNA binding
p0003735molecular_functionstructural constituent of ribosome
p0005737cellular_componentcytoplasm
p0005840cellular_componentribosome
p0006412biological_processtranslation
p0019843molecular_functionrRNA binding
p0022627cellular_componentcytosolic small ribosomal subunit
p0043229cellular_componentintracellular organelle
p1990904cellular_componentribonucleoprotein complex
q0003735molecular_functionstructural constituent of ribosome
q0005737cellular_componentcytoplasm
q0005840cellular_componentribosome
q0006412biological_processtranslation
q0015935cellular_componentsmall ribosomal subunit
q0043229cellular_componentintracellular organelle
q1990904cellular_componentribonucleoprotein complex
r0003723molecular_functionRNA binding
r0003735molecular_functionstructural constituent of ribosome
r0005840cellular_componentribosome
r0006412biological_processtranslation
r0019843molecular_functionrRNA binding
r0022627cellular_componentcytosolic small ribosomal subunit
r1990904cellular_componentribonucleoprotein complex
s0003723molecular_functionRNA binding
s0003735molecular_functionstructural constituent of ribosome
s0005840cellular_componentribosome
s0006412biological_processtranslation
s0019843molecular_functionrRNA binding
s0022627cellular_componentcytosolic small ribosomal subunit
s0070181molecular_functionsmall ribosomal subunit rRNA binding
s1990904cellular_componentribonucleoprotein complex
t0000028biological_processribosomal small subunit assembly
t0003723molecular_functionRNA binding
t0003735molecular_functionstructural constituent of ribosome
t0005737cellular_componentcytoplasm
t0005840cellular_componentribosome
t0006412biological_processtranslation
t0015935cellular_componentsmall ribosomal subunit
t0019843molecular_functionrRNA binding
t0022627cellular_componentcytosolic small ribosomal subunit
t0043229cellular_componentintracellular organelle
t1990904cellular_componentribonucleoprotein complex
u0003723molecular_functionRNA binding
u0003735molecular_functionstructural constituent of ribosome
u0005829cellular_componentcytosol
u0005840cellular_componentribosome
u0006412biological_processtranslation
u0015935cellular_componentsmall ribosomal subunit
u0019843molecular_functionrRNA binding
u0070181molecular_functionsmall ribosomal subunit rRNA binding
u1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVkIqEtRPLS
ChainResidueDetails
rGLY58-SER70

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. DGRkhvpvyVtedmVGhkLGEFapT
ChainResidueDetails
tASP53-THR77

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrdfRkLWITRINaaaR
ChainResidueDetails
TLYS54-ARG70

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IeTTeaRaKevrsvvEkLITlGK
ChainResidueDetails
QILE30-LYS52

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VneHLrthKkDhhSrrgLlkMvgrrrhLlnY
ChainResidueDetails
pVAL39-TYR69

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. GDnVkVIaGkdKGke.GkV
ChainResidueDetails
XGLY6-VAL23

site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrtksgvrrn.DGsyikFdeNacVI
ChainResidueDetails
NALA60-ILE86

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GkRRLAYeIN
ChainResidueDetails
gGLY44-ASN53

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaLVSTSeGVItdkeAR
ChainResidueDetails
iGLY102-ARG119

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LAsRLdavVYSlglArTrrqARqLV
ChainResidueDetails
eLEU90-VAL114

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CercgrphsvyrkFKLCRiCFR
ChainResidueDetails
oARG23-ARG45

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. DIssdsHPFYTgrqkfaaad....GR
ChainResidueDetails
4ASP49-ARG70

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGI
ChainResidueDetails
KPRO154-ILE162

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrsGAdvsGPIpLPT
ChainResidueDetails
kALA29-THR44

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
mLYS56-ARG63

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MkQLLEAGVHFG
ChainResidueDetails
cMET6-GLY17

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PqaLFVvDprkErnaIaEarklNIP
ChainResidueDetails
cPRO158-PRO182

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGSVmNPnD
ChainResidueDetails
GPRO218-ASP229

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGftGQaqAirhGiARAL
ChainResidueDetails
jGLY71-LEU89

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqsA.GLeVtairDvTPvPHN
ChainResidueDetails
lILE97-ASN119

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YiTtKNkrnnPerVEmkKFC
ChainResidueDetails
6TYR17-CYS36

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.TelLkrFISEr.GKIlprRV
ChainResidueDetails
sILE26-VAL49

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. IKGMLPstrl.GEkqgkkLfVYgG
ChainResidueDetails
MILE106-GLY128

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FvagdviDvtGvSkGKGfqGaikR
ChainResidueDetails
HPHE110-ARG133

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHrrGlpVRGQ
ChainResidueDetails
nARG87-GLN100

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRgGKVWIKIFP
ChainResidueDetails
PLYS59-PRO70

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGaGKGavegW
ChainResidueDetails
PARG82-TRP93

site_idPS00828
Number of Residues26
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CekCkvIkRkgkVmViCenp.KHkQrQ
ChainResidueDetails
9CYS11-GLN36

site_idPS00591
Number of Residues11
DetailsGH10_1 Glycosyl hydrolases family 10 (GH10) active site. AIEVdITELNI
ChainResidueDetails
YALA140-ILE150

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTHrGAaKRVkrtasgqlkrsraft.SH
ChainResidueDetails
8LYS5-HIS31

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KrfRpRAqGRasainkrtSHITIvV
ChainResidueDetails
VLYS83-VAL107

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SkLvtkLInkimldGKRgtaqrILysA
ChainResidueDetails
hSER20-ALA46

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTYQpnkrkHskvh.GFrkR
ChainResidueDetails
7LYS3-ARG22

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KILGnGsLdkk..LtVkahkFSasAaeaIdakG
ChainResidueDetails
OLYS110-GLY140

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsILyRQRGtkiypG
ChainResidueDetails
ZGLY42-GLY56

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGKVR.RAKLYYLR
ChainResidueDetails
SVAL88-ARG103

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFtAlvVVGDkn.GrVGfGtgkaq.EVpe.AI
ChainResidueDetails
fGLY28-ILE60

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LelITGQkpLvTkAKkS
ChainResidueDetails
JLEU57-SER73

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARaeqyseGtVplHt..LradIDyahaeadTtyGklG
ChainResidueDetails
dALA162-GLY196

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: 3-methylthioaspartic acid => ECO:0000250
ChainResidueDetails
mASP102
oCYS27
oCYS40
oCYS43

218853

PDB entries from 2024-04-24

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