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7MQ9

Cryo-EM structure of the human SSU processome, state pre-A1*

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
L30003676molecular_functionnucleic acid binding
L30003723molecular_functionRNA binding
L30003735molecular_functionstructural constituent of ribosome
L30005840cellular_componentribosome
L30006412biological_processtranslation
L40003723molecular_functionRNA binding
L40003735molecular_functionstructural constituent of ribosome
L40005840cellular_componentribosome
L40006412biological_processtranslation
L50000028biological_processribosomal small subunit assembly
L50002181biological_processcytoplasmic translation
L50003723molecular_functionRNA binding
L50003729molecular_functionmRNA binding
L50003735molecular_functionstructural constituent of ribosome
L50005515molecular_functionprotein binding
L50005634cellular_componentnucleus
L50005654cellular_componentnucleoplasm
L50005730cellular_componentnucleolus
L50005737cellular_componentcytoplasm
L50005829cellular_componentcytosol
L50005840cellular_componentribosome
L50005925cellular_componentfocal adhesion
L50006412biological_processtranslation
L50006413biological_processtranslational initiation
L50006450biological_processregulation of translational fidelity
L50015935cellular_componentsmall ribosomal subunit
L50016020cellular_componentmembrane
L50019843molecular_functionrRNA binding
L50022626cellular_componentcytosolic ribosome
L50022627cellular_componentcytosolic small ribosomal subunit
L50032040cellular_componentsmall-subunit processome
L50042274biological_processribosomal small subunit biogenesis
L50045202cellular_componentsynapse
L50070062cellular_componentextracellular exosome
L51990904cellular_componentribonucleoprotein complex
L60000082biological_processG1/S transition of mitotic cell cycle
L60000278biological_processmitotic cell cycle
L60001890biological_processplacenta development
L60002181biological_processcytoplasmic translation
L60002309biological_processT cell proliferation involved in immune response
L60003723molecular_functionRNA binding
L60003735molecular_functionstructural constituent of ribosome
L60005515molecular_functionprotein binding
L60005634cellular_componentnucleus
L60005654cellular_componentnucleoplasm
L60005730cellular_componentnucleolus
L60005737cellular_componentcytoplasm
L60005783cellular_componentendoplasmic reticulum
L60005829cellular_componentcytosol
L60005840cellular_componentribosome
L60006364biological_processrRNA processing
L60006412biological_processtranslation
L60006924biological_processactivation-induced cell death of T cells
L60007369biological_processgastrulation
L60008284biological_processpositive regulation of cell population proliferation
L60015935cellular_componentsmall ribosomal subunit
L60016020cellular_componentmembrane
L60019901molecular_functionprotein kinase binding
L60022605biological_processmammalian oogenesis stage
L60022626cellular_componentcytosolic ribosome
L60022627cellular_componentcytosolic small ribosomal subunit
L60030425cellular_componentdendrite
L60031929biological_processTOR signaling
L60032040cellular_componentsmall-subunit processome
L60033077biological_processT cell differentiation in thymus
L60036464cellular_componentcytoplasmic ribonucleoprotein granule
L60042274biological_processribosomal small subunit biogenesis
L60042593biological_processglucose homeostasis
L60043065biological_processpositive regulation of apoptotic process
L60043066biological_processnegative regulation of apoptotic process
L60044297cellular_componentcell body
L60048471cellular_componentperinuclear region of cytoplasm
L60048821biological_processerythrocyte development
L61990904cellular_componentribonucleoprotein complex
L70001843biological_processneural tube closure
L70002181biological_processcytoplasmic translation
L70003723molecular_functionRNA binding
L70003730molecular_functionmRNA 3'-UTR binding
L70003735molecular_functionstructural constituent of ribosome
L70005515molecular_functionprotein binding
L70005634cellular_componentnucleus
L70005654cellular_componentnucleoplasm
L70005730cellular_componentnucleolus
L70005737cellular_componentcytoplasm
L70005783cellular_componentendoplasmic reticulum
L70005813cellular_componentcentrosome
L70005829cellular_componentcytosol
L70005840cellular_componentribosome
L70005856cellular_componentcytoskeleton
L70005925cellular_componentfocal adhesion
L70006364biological_processrRNA processing
L70006412biological_processtranslation
L70010628biological_processpositive regulation of gene expression
L70014033biological_processneural crest cell differentiation
L70016020cellular_componentmembrane
L70019901molecular_functionprotein kinase binding
L70022626cellular_componentcytosolic ribosome
L70022627cellular_componentcytosolic small ribosomal subunit
L70032040cellular_componentsmall-subunit processome
L70032991cellular_componentprotein-containing complex
L70042274biological_processribosomal small subunit biogenesis
L70045202cellular_componentsynapse
L70048027molecular_functionmRNA 5'-UTR binding
L70050821biological_processprotein stabilization
L71902255biological_processpositive regulation of intrinsic apoptotic signaling pathway by p53 class mediator
L71904667biological_processnegative regulation of ubiquitin protein ligase activity
L71990904cellular_componentribonucleoprotein complex
L71990948molecular_functionubiquitin ligase inhibitor activity
L72000059biological_processnegative regulation of ubiquitin-dependent protein catabolic process
L80000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
L80002181biological_processcytoplasmic translation
L80003723molecular_functionRNA binding
L80003735molecular_functionstructural constituent of ribosome
L80005515molecular_functionprotein binding
L80005634cellular_componentnucleus
L80005654cellular_componentnucleoplasm
L80005730cellular_componentnucleolus
L80005737cellular_componentcytoplasm
L80005783cellular_componentendoplasmic reticulum
L80005829cellular_componentcytosol
L80005840cellular_componentribosome
L80005925cellular_componentfocal adhesion
L80006412biological_processtranslation
L80016020cellular_componentmembrane
L80022626cellular_componentcytosolic ribosome
L80022627cellular_componentcytosolic small ribosomal subunit
L80032040cellular_componentsmall-subunit processome
L80042274biological_processribosomal small subunit biogenesis
L80070062cellular_componentextracellular exosome
L81990904cellular_componentribonucleoprotein complex
L90002181biological_processcytoplasmic translation
L90003723molecular_functionRNA binding
L90003735molecular_functionstructural constituent of ribosome
L90005515molecular_functionprotein binding
L90005634cellular_componentnucleus
L90005654cellular_componentnucleoplasm
L90005730cellular_componentnucleolus
L90005737cellular_componentcytoplasm
L90005829cellular_componentcytosol
L90005840cellular_componentribosome
L90005925cellular_componentfocal adhesion
L90006412biological_processtranslation
L90006417biological_processregulation of translation
L90008284biological_processpositive regulation of cell population proliferation
L90015935cellular_componentsmall ribosomal subunit
L90016020cellular_componentmembrane
L90019843molecular_functionrRNA binding
L90022626cellular_componentcytosolic ribosome
L90022627cellular_componentcytosolic small ribosomal subunit
L90032040cellular_componentsmall-subunit processome
L90042274biological_processribosomal small subunit biogenesis
L90045182molecular_functiontranslation regulator activity
L90045202cellular_componentsynapse
L90070062cellular_componentextracellular exosome
L91990904cellular_componentribonucleoprotein complex
LA0002181biological_processcytoplasmic translation
LA0003723molecular_functionRNA binding
LA0003735molecular_functionstructural constituent of ribosome
LA0005515molecular_functionprotein binding
LA0005634cellular_componentnucleus
LA0005654cellular_componentnucleoplasm
LA0005730cellular_componentnucleolus
LA0005737cellular_componentcytoplasm
LA0005794cellular_componentGolgi apparatus
LA0005829cellular_componentcytosol
LA0005840cellular_componentribosome
LA0006412biological_processtranslation
LA0016020cellular_componentmembrane
LA0022626cellular_componentcytosolic ribosome
LA0022627cellular_componentcytosolic small ribosomal subunit
LA0032040cellular_componentsmall-subunit processome
LA0042274biological_processribosomal small subunit biogenesis
LA0043231cellular_componentintracellular membrane-bounded organelle
LA0090263biological_processpositive regulation of canonical Wnt signaling pathway
LA1990145biological_processmaintenance of translational fidelity
LA1990904cellular_componentribonucleoprotein complex
LC0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LC0002181biological_processcytoplasmic translation
LC0003723molecular_functionRNA binding
LC0003735molecular_functionstructural constituent of ribosome
LC0005515molecular_functionprotein binding
LC0005634cellular_componentnucleus
LC0005654cellular_componentnucleoplasm
LC0005730cellular_componentnucleolus
LC0005737cellular_componentcytoplasm
LC0005829cellular_componentcytosol
LC0005840cellular_componentribosome
LC0005925cellular_componentfocal adhesion
LC0006364biological_processrRNA processing
LC0006412biological_processtranslation
LC0015935cellular_componentsmall ribosomal subunit
LC0016020cellular_componentmembrane
LC0022626cellular_componentcytosolic ribosome
LC0022627cellular_componentcytosolic small ribosomal subunit
LC0032040cellular_componentsmall-subunit processome
LC0042274biological_processribosomal small subunit biogenesis
LC0045202cellular_componentsynapse
LC0070062cellular_componentextracellular exosome
LC1990830biological_processcellular response to leukemia inhibitory factor
LC1990904cellular_componentribonucleoprotein complex
LD0002181biological_processcytoplasmic translation
LD0003723molecular_functionRNA binding
LD0003735molecular_functionstructural constituent of ribosome
LD0005515molecular_functionprotein binding
LD0005634cellular_componentnucleus
LD0005654cellular_componentnucleoplasm
LD0005730cellular_componentnucleolus
LD0005737cellular_componentcytoplasm
LD0005829cellular_componentcytosol
LD0005840cellular_componentribosome
LD0005925cellular_componentfocal adhesion
LD0006412biological_processtranslation
LD0016020cellular_componentmembrane
LD0019843molecular_functionrRNA binding
LD0022626cellular_componentcytosolic ribosome
LD0022627cellular_componentcytosolic small ribosomal subunit
LD0032040cellular_componentsmall-subunit processome
LD0042274biological_processribosomal small subunit biogenesis
LD0045202cellular_componentsynapse
LD0070062cellular_componentextracellular exosome
LD1990904cellular_componentribonucleoprotein complex
LF0002181biological_processcytoplasmic translation
LF0003723molecular_functionRNA binding
LF0003735molecular_functionstructural constituent of ribosome
LF0005634cellular_componentnucleus
LF0005654cellular_componentnucleoplasm
LF0005730cellular_componentnucleolus
LF0005737cellular_componentcytoplasm
LF0005783cellular_componentendoplasmic reticulum
LF0005829cellular_componentcytosol
LF0005840cellular_componentribosome
LF0006364biological_processrRNA processing
LF0006412biological_processtranslation
LF0015935cellular_componentsmall ribosomal subunit
LF0016020cellular_componentmembrane
LF0022626cellular_componentcytosolic ribosome
LF0022627cellular_componentcytosolic small ribosomal subunit
LF0031369molecular_functiontranslation initiation factor binding
LF0032040cellular_componentsmall-subunit processome
LF0034101biological_processerythrocyte homeostasis
LF0042274biological_processribosomal small subunit biogenesis
LF1990904cellular_componentribonucleoprotein complex
LG0000028biological_processribosomal small subunit assembly
LG0002181biological_processcytoplasmic translation
LG0003723molecular_functionRNA binding
LG0003735molecular_functionstructural constituent of ribosome
LG0005515molecular_functionprotein binding
LG0005634cellular_componentnucleus
LG0005654cellular_componentnucleoplasm
LG0005730cellular_componentnucleolus
LG0005737cellular_componentcytoplasm
LG0005783cellular_componentendoplasmic reticulum
LG0005791cellular_componentrough endoplasmic reticulum
LG0005829cellular_componentcytosol
LG0005840cellular_componentribosome
LG0006364biological_processrRNA processing
LG0006412biological_processtranslation
LG0015935cellular_componentsmall ribosomal subunit
LG0022627cellular_componentcytosolic small ribosomal subunit
LG0030490biological_processmaturation of SSU-rRNA
LG0032040cellular_componentsmall-subunit processome
LG0042254biological_processribosome biogenesis
LG0042274biological_processribosomal small subunit biogenesis
LG0045202cellular_componentsynapse
LG0070062cellular_componentextracellular exosome
LG0098556cellular_componentcytoplasmic side of rough endoplasmic reticulum membrane
LG1990904cellular_componentribonucleoprotein complex
LH0003723molecular_functionRNA binding
LH0005634cellular_componentnucleus
LH0005654cellular_componentnucleoplasm
LH0005730cellular_componentnucleolus
LH0006364biological_processrRNA processing
LH0032040cellular_componentsmall-subunit processome
LH0042254biological_processribosome biogenesis
LH0042274biological_processribosomal small subunit biogenesis
LH0045943biological_processpositive regulation of transcription by RNA polymerase I
LH2000234biological_processpositive regulation of rRNA processing
LI0005634cellular_componentnucleus
LI0030490biological_processmaturation of SSU-rRNA
LJ0001650cellular_componentfibrillar center
LJ0003723molecular_functionRNA binding
LJ0005515molecular_functionprotein binding
LJ0005634cellular_componentnucleus
LJ0005654cellular_componentnucleoplasm
LJ0005730cellular_componentnucleolus
LJ0005737cellular_componentcytoplasm
LJ0005783cellular_componentendoplasmic reticulum
LJ0006364biological_processrRNA processing
LJ0032040cellular_componentsmall-subunit processome
LJ0042254biological_processribosome biogenesis
LJ0042274biological_processribosomal small subunit biogenesis
LJ0045943biological_processpositive regulation of transcription by RNA polymerase I
LJ2000234biological_processpositive regulation of rRNA processing
LK0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LK0000785cellular_componentchromatin
LK0000993molecular_functionRNA polymerase II complex binding
LK0001650cellular_componentfibrillar center
LK0003711molecular_functiontranscription elongation factor activity
LK0003723molecular_functionRNA binding
LK0005515molecular_functionprotein binding
LK0005634cellular_componentnucleus
LK0005654cellular_componentnucleoplasm
LK0005730cellular_componentnucleolus
LK0006364biological_processrRNA processing
LK0032040cellular_componentsmall-subunit processome
LK0034243biological_processregulation of transcription elongation by RNA polymerase II
LK0042254biological_processribosome biogenesis
LK0042274biological_processribosomal small subunit biogenesis
LK0045943biological_processpositive regulation of transcription by RNA polymerase I
LK2000036biological_processregulation of stem cell population maintenance
LK2000234biological_processpositive regulation of rRNA processing
LL0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LL0000785cellular_componentchromatin
LL0000993molecular_functionRNA polymerase II complex binding
LL0001650cellular_componentfibrillar center
LL0003711molecular_functiontranscription elongation factor activity
LL0003723molecular_functionRNA binding
LL0005515molecular_functionprotein binding
LL0005634cellular_componentnucleus
LL0005654cellular_componentnucleoplasm
LL0005730cellular_componentnucleolus
LL0006364biological_processrRNA processing
LL0032040cellular_componentsmall-subunit processome
LL0034243biological_processregulation of transcription elongation by RNA polymerase II
LL0042254biological_processribosome biogenesis
LL0042274biological_processribosomal small subunit biogenesis
LL0045943biological_processpositive regulation of transcription by RNA polymerase I
LL2000036biological_processregulation of stem cell population maintenance
LL2000234biological_processpositive regulation of rRNA processing
LM0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LM0001650cellular_componentfibrillar center
LM0003723molecular_functionRNA binding
LM0005515molecular_functionprotein binding
LM0005634cellular_componentnucleus
LM0005654cellular_componentnucleoplasm
LM0005730cellular_componentnucleolus
LM0005739cellular_componentmitochondrion
LM0006364biological_processrRNA processing
LM0016020cellular_componentmembrane
LM0030515molecular_functionsnoRNA binding
LM0030686cellular_component90S preribosome
LM0032040cellular_componentsmall-subunit processome
LM0034455cellular_componentt-UTP complex
LM0042254biological_processribosome biogenesis
LM0042274biological_processribosomal small subunit biogenesis
LM0045943biological_processpositive regulation of transcription by RNA polymerase I
LM1990904cellular_componentribonucleoprotein complex
LM2000234biological_processpositive regulation of rRNA processing
LN0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LN0001650cellular_componentfibrillar center
LN0003723molecular_functionRNA binding
LN0005515molecular_functionprotein binding
LN0005634cellular_componentnucleus
LN0005654cellular_componentnucleoplasm
LN0005694cellular_componentchromosome
LN0005730cellular_componentnucleolus
LN0006355biological_processregulation of DNA-templated transcription
LN0006364biological_processrRNA processing
LN0030490biological_processmaturation of SSU-rRNA
LN0030686cellular_component90S preribosome
LN0032040cellular_componentsmall-subunit processome
LN0034455cellular_componentt-UTP complex
LN0042254biological_processribosome biogenesis
LN0042274biological_processribosomal small subunit biogenesis
LO0000028biological_processribosomal small subunit assembly
LO0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LO0003723molecular_functionRNA binding
LO0005634cellular_componentnucleus
LO0005654cellular_componentnucleoplasm
LO0005730cellular_componentnucleolus
LO0031981cellular_componentnuclear lumen
LO0032040cellular_componentsmall-subunit processome
LO0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
LO0042254biological_processribosome biogenesis
LO0042274biological_processribosomal small subunit biogenesis
LP0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LP0005515molecular_functionprotein binding
LP0005634cellular_componentnucleus
LP0005654cellular_componentnucleoplasm
LP0005694cellular_componentchromosome
LP0005730cellular_componentnucleolus
LP0006364biological_processrRNA processing
LP0006396biological_processRNA processing
LP0030515molecular_functionsnoRNA binding
LP0032040cellular_componentsmall-subunit processome
LP0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
LP0042274biological_processribosomal small subunit biogenesis
LQ0003723molecular_functionRNA binding
LQ0005634cellular_componentnucleus
LQ0005654cellular_componentnucleoplasm
LQ0005730cellular_componentnucleolus
LQ0030490biological_processmaturation of SSU-rRNA
LQ0030515molecular_functionsnoRNA binding
LQ0031965cellular_componentnuclear membrane
LQ0032040cellular_componentsmall-subunit processome
LQ0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
LQ0042254biological_processribosome biogenesis
LQ0042274biological_processribosomal small subunit biogenesis
LR0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LR0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LR0003723molecular_functionRNA binding
LR0005515molecular_functionprotein binding
LR0005634cellular_componentnucleus
LR0005654cellular_componentnucleoplasm
LR0005730cellular_componentnucleolus
LR0006364biological_processrRNA processing
LR0030686cellular_component90S preribosome
LR0032040cellular_componentsmall-subunit processome
LR0034511molecular_functionU3 snoRNA binding
LR0042274biological_processribosomal small subunit biogenesis
LS0003723molecular_functionRNA binding
LS0005634cellular_componentnucleus
LS0005654cellular_componentnucleoplasm
LS0005730cellular_componentnucleolus
LS0006364biological_processrRNA processing
LS0031965cellular_componentnuclear membrane
LS0032040cellular_componentsmall-subunit processome
LS0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
LS0042274biological_processribosomal small subunit biogenesis
LT0003723molecular_functionRNA binding
LT0005634cellular_componentnucleus
LT0005654cellular_componentnucleoplasm
LT0005730cellular_componentnucleolus
LT0006364biological_processrRNA processing
LT0007601biological_processvisual perception
LT0008150biological_processbiological_process
LT0032040cellular_componentsmall-subunit processome
LT0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
LT0042254biological_processribosome biogenesis
LT0042274biological_processribosomal small subunit biogenesis
LU0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LU0001555biological_processoocyte growth
LU0003723molecular_functionRNA binding
LU0005515molecular_functionprotein binding
LU0005634cellular_componentnucleus
LU0005654cellular_componentnucleoplasm
LU0005730cellular_componentnucleolus
LU0005813cellular_componentcentrosome
LU0005829cellular_componentcytosol
LU0006364biological_processrRNA processing
LU0007056biological_processspindle assembly involved in female meiosis
LU0016567biological_processprotein ubiquitination
LU0030054cellular_componentcell junction
LU0030331molecular_functionnuclear estrogen receptor binding
LU0032040cellular_componentsmall-subunit processome
LU0042254biological_processribosome biogenesis
LU0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
LU0044725biological_processepigenetic programming in the zygotic pronuclei
LU0046697biological_processdecidualization
LU0080008cellular_componentCul4-RING E3 ubiquitin ligase complex
LU1990756molecular_functionubiquitin-like ligase-substrate adaptor activity
LU1990904cellular_componentribonucleoprotein complex
LW0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LW0003723molecular_functionRNA binding
LW0005634cellular_componentnucleus
LW0005654cellular_componentnucleoplasm
LW0005730cellular_componentnucleolus
LW0032040cellular_componentsmall-subunit processome
LW0042274biological_processribosomal small subunit biogenesis
LZ0003723molecular_functionRNA binding
LZ0005515molecular_functionprotein binding
LZ0005634cellular_componentnucleus
LZ0005654cellular_componentnucleoplasm
LZ0005730cellular_componentnucleolus
LZ0006364biological_processrRNA processing
LZ0019843molecular_functionrRNA binding
LZ0030490biological_processmaturation of SSU-rRNA
LZ0030515molecular_functionsnoRNA binding
LZ0030684cellular_componentpreribosome
LZ0032040cellular_componentsmall-subunit processome
LZ0034457cellular_componentMpp10 complex
LZ0042254biological_processribosome biogenesis
LZ0042274biological_processribosomal small subunit biogenesis
LZ1990904cellular_componentribonucleoprotein complex
NA0000375biological_processRNA splicing, via transesterification reactions
NA0003723molecular_functionRNA binding
NA0005515molecular_functionprotein binding
NA0005634cellular_componentnucleus
NA0005654cellular_componentnucleoplasm
NA0005694cellular_componentchromosome
NA0005730cellular_componentnucleolus
NA0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
NA0006364biological_processrRNA processing
NA0006396biological_processRNA processing
NA0008380biological_processRNA splicing
NA0030490biological_processmaturation of SSU-rRNA
NA0032040cellular_componentsmall-subunit processome
NA0034457cellular_componentMpp10 complex
NA0042254biological_processribosome biogenesis
NA0042274biological_processribosomal small subunit biogenesis
NA1990904cellular_componentribonucleoprotein complex
NB0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NB0003723molecular_functionRNA binding
NB0005515molecular_functionprotein binding
NB0005634cellular_componentnucleus
NB0005654cellular_componentnucleoplasm
NB0005730cellular_componentnucleolus
NB0006325biological_processchromatin organization
NB0007420biological_processbrain development
NB0032040cellular_componentsmall-subunit processome
NB0042274biological_processribosomal small subunit biogenesis
ND0003723molecular_functionRNA binding
ND0005515molecular_functionprotein binding
ND0005634cellular_componentnucleus
ND0005694cellular_componentchromosome
ND0005730cellular_componentnucleolus
ND0005739cellular_componentmitochondrion
ND0030490biological_processmaturation of SSU-rRNA
ND0032040cellular_componentsmall-subunit processome
ND0042254biological_processribosome biogenesis
ND0042274biological_processribosomal small subunit biogenesis
NE0003723molecular_functionRNA binding
NE0005634cellular_componentnucleus
NE0005694cellular_componentchromosome
NE0005730cellular_componentnucleolus
NE0032040cellular_componentsmall-subunit processome
NE0042274biological_processribosomal small subunit biogenesis
NF0002181biological_processcytoplasmic translation
NF0003723molecular_functionRNA binding
NF0003729molecular_functionmRNA binding
NF0003735molecular_functionstructural constituent of ribosome
NF0005515molecular_functionprotein binding
NF0005634cellular_componentnucleus
NF0005654cellular_componentnucleoplasm
NF0005730cellular_componentnucleolus
NF0005737cellular_componentcytoplasm
NF0005829cellular_componentcytosol
NF0005840cellular_componentribosome
NF0005925cellular_componentfocal adhesion
NF0006412biological_processtranslation
NF0014069cellular_componentpostsynaptic density
NF0016020cellular_componentmembrane
NF0022626cellular_componentcytosolic ribosome
NF0022627cellular_componentcytosolic small ribosomal subunit
NF0032040cellular_componentsmall-subunit processome
NF0033119biological_processnegative regulation of RNA splicing
NF0042274biological_processribosomal small subunit biogenesis
NF0048027molecular_functionmRNA 5'-UTR binding
NF0070062cellular_componentextracellular exosome
NF0070181molecular_functionsmall ribosomal subunit rRNA binding
NF1990904cellular_componentribonucleoprotein complex
NG0000028biological_processribosomal small subunit assembly
NG0000122biological_processnegative regulation of transcription by RNA polymerase II
NG0002181biological_processcytoplasmic translation
NG0003723molecular_functionRNA binding
NG0003735molecular_functionstructural constituent of ribosome
NG0005515molecular_functionprotein binding
NG0005634cellular_componentnucleus
NG0005654cellular_componentnucleoplasm
NG0005730cellular_componentnucleolus
NG0005737cellular_componentcytoplasm
NG0005829cellular_componentcytosol
NG0005840cellular_componentribosome
NG0005925cellular_componentfocal adhesion
NG0006412biological_processtranslation
NG0006417biological_processregulation of translation
NG0014069cellular_componentpostsynaptic density
NG0016020cellular_componentmembrane
NG0022626cellular_componentcytosolic ribosome
NG0022627cellular_componentcytosolic small ribosomal subunit
NG0030218biological_processerythrocyte differentiation
NG0030490biological_processmaturation of SSU-rRNA
NG0032040cellular_componentsmall-subunit processome
NG0042274biological_processribosomal small subunit biogenesis
NG0045182molecular_functiontranslation regulator activity
NG0045202cellular_componentsynapse
NG0048027molecular_functionmRNA 5'-UTR binding
NG0070062cellular_componentextracellular exosome
NG1990904cellular_componentribonucleoprotein complex
NH0000794cellular_componentcondensed nuclear chromosome
NH0003723molecular_functionRNA binding
NH0005515molecular_functionprotein binding
NH0005634cellular_componentnucleus
NH0005654cellular_componentnucleoplasm
NH0005694cellular_componentchromosome
NH0005730cellular_componentnucleolus
NH0005739cellular_componentmitochondrion
NH0006364biological_processrRNA processing
NH0006409biological_processtRNA export from nucleus
NH0032040cellular_componentsmall-subunit processome
NH0032545cellular_componentCURI complex
NH0034456cellular_componentUTP-C complex
NH0042274biological_processribosomal small subunit biogenesis
NI0000028biological_processribosomal small subunit assembly
NI0001825biological_processblastocyst formation
NI0003676molecular_functionnucleic acid binding
NI0003723molecular_functionRNA binding
NI0005515molecular_functionprotein binding
NI0005634cellular_componentnucleus
NI0005654cellular_componentnucleoplasm
NI0005730cellular_componentnucleolus
NI0005737cellular_componentcytoplasm
NI0005813cellular_componentcentrosome
NI0005856cellular_componentcytoskeleton
NI0005929cellular_componentcilium
NI0006364biological_processrRNA processing
NI0032040cellular_componentsmall-subunit processome
NI0032545cellular_componentCURI complex
NI0034456cellular_componentUTP-C complex
NI0042254biological_processribosome biogenesis
NI0042274biological_processribosomal small subunit biogenesis
NI0042995cellular_componentcell projection
NI0061523biological_processcilium disassembly
NI1902570biological_processprotein localization to nucleolus
NJ0000049molecular_functiontRNA binding
NJ0000154biological_processrRNA modification
NJ0000781cellular_componentchromosome, telomeric region
NJ0003723molecular_functionRNA binding
NJ0005515molecular_functionprotein binding
NJ0005524molecular_functionATP binding
NJ0005634cellular_componentnucleus
NJ0005654cellular_componentnucleoplasm
NJ0005697cellular_componenttelomerase holoenzyme complex
NJ0005730cellular_componentnucleolus
NJ0006364biological_processrRNA processing
NJ0006417biological_processregulation of translation
NJ0006473biological_processprotein acetylation
NJ0008033biological_processtRNA processing
NJ0008080molecular_functionN-acetyltransferase activity
NJ0010824biological_processregulation of centrosome duplication
NJ0016020cellular_componentmembrane
NJ0016072biological_processrRNA metabolic process
NJ0016746molecular_functionacyltransferase activity
NJ0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
NJ0030496cellular_componentmidbody
NJ0032040cellular_componentsmall-subunit processome
NJ0032211biological_processnegative regulation of telomere maintenance via telomerase
NJ0034470biological_processobsolete ncRNA processing
NJ0042274biological_processribosomal small subunit biogenesis
NJ0045727biological_processpositive regulation of translation
NJ0051391biological_processtRNA acetylation
NJ0051392molecular_functiontRNA N-acetyltransferase activity
NJ0070182molecular_functionDNA polymerase binding
NJ0106162molecular_functionmRNA N-acetyltransferase activity
NJ1904812biological_processrRNA acetylation involved in maturation of SSU-rRNA
NJ1990883molecular_functionrRNA cytidine N-acetyltransferase activity
NK0000049molecular_functiontRNA binding
NK0000154biological_processrRNA modification
NK0000781cellular_componentchromosome, telomeric region
NK0003723molecular_functionRNA binding
NK0005515molecular_functionprotein binding
NK0005524molecular_functionATP binding
NK0005634cellular_componentnucleus
NK0005654cellular_componentnucleoplasm
NK0005697cellular_componenttelomerase holoenzyme complex
NK0005730cellular_componentnucleolus
NK0006364biological_processrRNA processing
NK0006417biological_processregulation of translation
NK0006473biological_processprotein acetylation
NK0008033biological_processtRNA processing
NK0008080molecular_functionN-acetyltransferase activity
NK0010824biological_processregulation of centrosome duplication
NK0016020cellular_componentmembrane
NK0016072biological_processrRNA metabolic process
NK0016746molecular_functionacyltransferase activity
NK0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
NK0030496cellular_componentmidbody
NK0032040cellular_componentsmall-subunit processome
NK0032211biological_processnegative regulation of telomere maintenance via telomerase
NK0034470biological_processobsolete ncRNA processing
NK0042274biological_processribosomal small subunit biogenesis
NK0045727biological_processpositive regulation of translation
NK0051391biological_processtRNA acetylation
NK0051392molecular_functiontRNA N-acetyltransferase activity
NK0070182molecular_functionDNA polymerase binding
NK0106162molecular_functionmRNA N-acetyltransferase activity
NK1904812biological_processrRNA acetylation involved in maturation of SSU-rRNA
NK1990883molecular_functionrRNA cytidine N-acetyltransferase activity
NM0002181biological_processcytoplasmic translation
NM0003723molecular_functionRNA binding
NM0003735molecular_functionstructural constituent of ribosome
NM0005515molecular_functionprotein binding
NM0005634cellular_componentnucleus
NM0005654cellular_componentnucleoplasm
NM0005730cellular_componentnucleolus
NM0005737cellular_componentcytoplasm
NM0005783cellular_componentendoplasmic reticulum
NM0005829cellular_componentcytosol
NM0005840cellular_componentribosome
NM0005925cellular_componentfocal adhesion
NM0006412biological_processtranslation
NM0006413biological_processtranslational initiation
NM0022626cellular_componentcytosolic ribosome
NM0022627cellular_componentcytosolic small ribosomal subunit
NM0030154biological_processcell differentiation
NM0032040cellular_componentsmall-subunit processome
NM0042274biological_processribosomal small subunit biogenesis
NM0043066biological_processnegative regulation of apoptotic process
NM0045202cellular_componentsynapse
NM0048027molecular_functionmRNA 5'-UTR binding
NM0070062cellular_componentextracellular exosome
NM1990904cellular_componentribonucleoprotein complex
NN0003723molecular_functionRNA binding
NN0005515molecular_functionprotein binding
NN0005634cellular_componentnucleus
NN0005654cellular_componentnucleoplasm
NN0005667cellular_componenttranscription regulator complex
NN0005730cellular_componentnucleolus
NN0005737cellular_componentcytoplasm
NN0006357biological_processregulation of transcription by RNA polymerase II
NN0007155biological_processcell adhesion
NN0007346biological_processregulation of mitotic cell cycle
NN0019901molecular_functionprotein kinase binding
NN0032040cellular_componentsmall-subunit processome
NN0040016biological_processembryonic cleavage
NN0042254biological_processribosome biogenesis
NN0042274biological_processribosomal small subunit biogenesis
NN0042985biological_processnegative regulation of amyloid precursor protein biosynthetic process
NN0043066biological_processnegative regulation of apoptotic process
NN0043522molecular_functionleucine zipper domain binding
NN0045893biological_processpositive regulation of DNA-templated transcription
NN0048156molecular_functiontau protein binding
NN2001234biological_processnegative regulation of apoptotic signaling pathway
NO0002181biological_processcytoplasmic translation
NO0003723molecular_functionRNA binding
NO0003735molecular_functionstructural constituent of ribosome
NO0005515molecular_functionprotein binding
NO0005634cellular_componentnucleus
NO0005654cellular_componentnucleoplasm
NO0005730cellular_componentnucleolus
NO0005737cellular_componentcytoplasm
NO0005829cellular_componentcytosol
NO0005840cellular_componentribosome
NO0006412biological_processtranslation
NO0008284biological_processpositive regulation of cell population proliferation
NO0009615biological_processresponse to virus
NO0016020cellular_componentmembrane
NO0022626cellular_componentcytosolic ribosome
NO0022627cellular_componentcytosolic small ribosomal subunit
NO0032040cellular_componentsmall-subunit processome
NO0042274biological_processribosomal small subunit biogenesis
NO0045202cellular_componentsynapse
NO0045787biological_processpositive regulation of cell cycle
NO0070062cellular_componentextracellular exosome
NO1990904cellular_componentribonucleoprotein complex
NQ0000028biological_processribosomal small subunit assembly
NQ0002181biological_processcytoplasmic translation
NQ0003677molecular_functionDNA binding
NQ0003723molecular_functionRNA binding
NQ0003735molecular_functionstructural constituent of ribosome
NQ0005515molecular_functionprotein binding
NQ0005634cellular_componentnucleus
NQ0005654cellular_componentnucleoplasm
NQ0005730cellular_componentnucleolus
NQ0005737cellular_componentcytoplasm
NQ0005829cellular_componentcytosol
NQ0005840cellular_componentribosome
NQ0006364biological_processrRNA processing
NQ0006412biological_processtranslation
NQ0008270molecular_functionzinc ion binding
NQ0014069cellular_componentpostsynaptic density
NQ0022626cellular_componentcytosolic ribosome
NQ0022627cellular_componentcytosolic small ribosomal subunit
NQ0032040cellular_componentsmall-subunit processome
NQ0042274biological_processribosomal small subunit biogenesis
NQ0046872molecular_functionmetal ion binding
NQ1990904cellular_componentribonucleoprotein complex
NT0002181biological_processcytoplasmic translation
NT0003723molecular_functionRNA binding
NT0003735molecular_functionstructural constituent of ribosome
NT0005515molecular_functionprotein binding
NT0005615cellular_componentextracellular space
NT0005634cellular_componentnucleus
NT0005654cellular_componentnucleoplasm
NT0005730cellular_componentnucleolus
NT0005737cellular_componentcytoplasm
NT0005741cellular_componentmitochondrial outer membrane
NT0005789cellular_componentendoplasmic reticulum membrane
NT0005829cellular_componentcytosol
NT0005840cellular_componentribosome
NT0005886cellular_componentplasma membrane
NT0006412biological_processtranslation
NT0010008cellular_componentendosome membrane
NT0016020cellular_componentmembrane
NT0016567biological_processprotein ubiquitination
NT0019941biological_processmodification-dependent protein catabolic process
NT0022626cellular_componentcytosolic ribosome
NT0022627cellular_componentcytosolic small ribosomal subunit
NT0030666cellular_componentendocytic vesicle membrane
NT0031386molecular_functionprotein tag activity
NT0031625molecular_functionubiquitin protein ligase binding
NT0031982cellular_componentvesicle
NT0032040cellular_componentsmall-subunit processome
NT0045202cellular_componentsynapse
NT0046872molecular_functionmetal ion binding
NT0070062cellular_componentextracellular exosome
NT1990904cellular_componentribonucleoprotein complex
NU0002181biological_processcytoplasmic translation
NU0003723molecular_functionRNA binding
NU0003735molecular_functionstructural constituent of ribosome
NU0005634cellular_componentnucleus
NU0005654cellular_componentnucleoplasm
NU0005730cellular_componentnucleolus
NU0005737cellular_componentcytoplasm
NU0005829cellular_componentcytosol
NU0005840cellular_componentribosome
NU0005925cellular_componentfocal adhesion
NU0006364biological_processrRNA processing
NU0006412biological_processtranslation
NU0006413biological_processtranslational initiation
NU0016020cellular_componentmembrane
NU0022626cellular_componentcytosolic ribosome
NU0022627cellular_componentcytosolic small ribosomal subunit
NU0032040cellular_componentsmall-subunit processome
NU0034101biological_processerythrocyte homeostasis
NU0042274biological_processribosomal small subunit biogenesis
NU0045202cellular_componentsynapse
NU1990904cellular_componentribonucleoprotein complex
NW0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NW0003723molecular_functionRNA binding
NW0005634cellular_componentnucleus
NW0005730cellular_componentnucleolus
NW0032040cellular_componentsmall-subunit processome
NY0003676molecular_functionnucleic acid binding
NY0003723molecular_functionRNA binding
NY0005515molecular_functionprotein binding
NY0005634cellular_componentnucleus
NY0005654cellular_componentnucleoplasm
NY0005694cellular_componentchromosome
NY0005730cellular_componentnucleolus
NY0005737cellular_componentcytoplasm
NY0006364biological_processrRNA processing
NY0016020cellular_componentmembrane
NY0032040cellular_componentsmall-subunit processome
NY0042254biological_processribosome biogenesis
NY0042274biological_processribosomal small subunit biogenesis
NY0045171cellular_componentintercellular bridge
NY1990904cellular_componentribonucleoprotein complex
SA0001650cellular_componentfibrillar center
SA0003723molecular_functionRNA binding
SA0005515molecular_functionprotein binding
SA0005634cellular_componentnucleus
SA0005654cellular_componentnucleoplasm
SA0005730cellular_componentnucleolus
SA0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
SA0005737cellular_componentcytoplasm
SA0006364biological_processrRNA processing
SA0016020cellular_componentmembrane
SA0030515molecular_functionsnoRNA binding
SA0031428cellular_componentbox C/D methylation guide snoRNP complex
SA0032040cellular_componentsmall-subunit processome
SA0042254biological_processribosome biogenesis
SA0042274biological_processribosomal small subunit biogenesis
SA0045296molecular_functioncadherin binding
SA0070761cellular_componentpre-snoRNP complex
SA1990226molecular_functionhistone methyltransferase binding
SA1990904cellular_componentribonucleoprotein complex
SB0001094molecular_functionTFIID-class transcription factor complex binding
SB0001650cellular_componentfibrillar center
SB0003723molecular_functionRNA binding
SB0005515molecular_functionprotein binding
SB0005634cellular_componentnucleus
SB0005654cellular_componentnucleoplasm
SB0005730cellular_componentnucleolus
SB0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
SB0005829cellular_componentcytosol
SB0006364biological_processrRNA processing
SB0015030cellular_componentCajal body
SB0016020cellular_componentmembrane
SB0030515molecular_functionsnoRNA binding
SB0031428cellular_componentbox C/D methylation guide snoRNP complex
SB0032040cellular_componentsmall-subunit processome
SB0042254biological_processribosome biogenesis
SB0042274biological_processribosomal small subunit biogenesis
SB0048254biological_processsnoRNA localization
SB0051117molecular_functionATPase binding
SB0070761cellular_componentpre-snoRNP complex
SB1990904cellular_componentribonucleoprotein complex
SC0000494biological_processbox C/D sno(s)RNA 3'-end processing
SC0001094molecular_functionTFIID-class transcription factor complex binding
SC0001649biological_processosteoblast differentiation
SC0001650cellular_componentfibrillar center
SC0001652cellular_componentgranular component
SC0003723molecular_functionRNA binding
SC0005515molecular_functionprotein binding
SC0005634cellular_componentnucleus
SC0005654cellular_componentnucleoplasm
SC0005730cellular_componentnucleolus
SC0006338biological_processchromatin remodeling
SC0006364biological_processrRNA processing
SC0008168molecular_functionmethyltransferase activity
SC0008649molecular_functionrRNA methyltransferase activity
SC0015030cellular_componentCajal body
SC0016020cellular_componentmembrane
SC0016074biological_processsno(s)RNA metabolic process
SC0031167biological_processrRNA methylation
SC0031428cellular_componentbox C/D methylation guide snoRNP complex
SC0032040cellular_componentsmall-subunit processome
SC0032259biological_processmethylation
SC0042274biological_processribosomal small subunit biogenesis
SC0048254biological_processsnoRNA localization
SC0051117molecular_functionATPase binding
SC0070062cellular_componentextracellular exosome
SC0180021molecular_functionU6 snRNA 2'-O-ribose methyltransferase activity
SC1990259molecular_functionhistone H2AQ104 methyltransferase activity
SC1990904cellular_componentribonucleoprotein complex
SD0000494biological_processbox C/D sno(s)RNA 3'-end processing
SD0001094molecular_functionTFIID-class transcription factor complex binding
SD0001649biological_processosteoblast differentiation
SD0001650cellular_componentfibrillar center
SD0001652cellular_componentgranular component
SD0003723molecular_functionRNA binding
SD0005515molecular_functionprotein binding
SD0005634cellular_componentnucleus
SD0005654cellular_componentnucleoplasm
SD0005730cellular_componentnucleolus
SD0006338biological_processchromatin remodeling
SD0006364biological_processrRNA processing
SD0008168molecular_functionmethyltransferase activity
SD0008649molecular_functionrRNA methyltransferase activity
SD0015030cellular_componentCajal body
SD0016020cellular_componentmembrane
SD0016074biological_processsno(s)RNA metabolic process
SD0031167biological_processrRNA methylation
SD0031428cellular_componentbox C/D methylation guide snoRNP complex
SD0032040cellular_componentsmall-subunit processome
SD0032259biological_processmethylation
SD0042274biological_processribosomal small subunit biogenesis
SD0048254biological_processsnoRNA localization
SD0051117molecular_functionATPase binding
SD0070062cellular_componentextracellular exosome
SD0180021molecular_functionU6 snRNA 2'-O-ribose methyltransferase activity
SD1990259molecular_functionhistone H2AQ104 methyltransferase activity
SD1990904cellular_componentribonucleoprotein complex
SE0000398biological_processmRNA splicing, via spliceosome
SE0000492biological_processbox C/D snoRNP assembly
SE0001651cellular_componentdense fibrillar component
SE0003723molecular_functionRNA binding
SE0005515molecular_functionprotein binding
SE0005634cellular_componentnucleus
SE0005654cellular_componentnucleoplasm
SE0005681cellular_componentspliceosomal complex
SE0005690cellular_componentU4atac snRNP
SE0005730cellular_componentnucleolus
SE0006397biological_processmRNA processing
SE0007338biological_processsingle fertilization
SE0008380biological_processRNA splicing
SE0030490biological_processmaturation of SSU-rRNA
SE0030515molecular_functionsnoRNA binding
SE0030621molecular_functionU4 snRNA binding
SE0030622molecular_functionU4atac snRNA binding
SE0031428cellular_componentbox C/D methylation guide snoRNP complex
SE0032040cellular_componentsmall-subunit processome
SE0032991cellular_componentprotein-containing complex
SE0034511molecular_functionU3 snoRNA binding
SE0034512molecular_functionbox C/D sno(s)RNA binding
SE0042254biological_processribosome biogenesis
SE0042274biological_processribosomal small subunit biogenesis
SE0046540cellular_componentU4/U6 x U5 tri-snRNP complex
SE0051117molecular_functionATPase binding
SE0071005cellular_componentU2-type precatalytic spliceosome
SE0071011cellular_componentprecatalytic spliceosome
SE1990904cellular_componentribonucleoprotein complex
SF0000398biological_processmRNA splicing, via spliceosome
SF0000492biological_processbox C/D snoRNP assembly
SF0001651cellular_componentdense fibrillar component
SF0003723molecular_functionRNA binding
SF0005515molecular_functionprotein binding
SF0005634cellular_componentnucleus
SF0005654cellular_componentnucleoplasm
SF0005681cellular_componentspliceosomal complex
SF0005690cellular_componentU4atac snRNP
SF0005730cellular_componentnucleolus
SF0006397biological_processmRNA processing
SF0007338biological_processsingle fertilization
SF0008380biological_processRNA splicing
SF0030490biological_processmaturation of SSU-rRNA
SF0030515molecular_functionsnoRNA binding
SF0030621molecular_functionU4 snRNA binding
SF0030622molecular_functionU4atac snRNA binding
SF0031428cellular_componentbox C/D methylation guide snoRNP complex
SF0032040cellular_componentsmall-subunit processome
SF0032991cellular_componentprotein-containing complex
SF0034511molecular_functionU3 snoRNA binding
SF0034512molecular_functionbox C/D sno(s)RNA binding
SF0042254biological_processribosome biogenesis
SF0042274biological_processribosomal small subunit biogenesis
SF0046540cellular_componentU4/U6 x U5 tri-snRNP complex
SF0051117molecular_functionATPase binding
SF0071005cellular_componentU2-type precatalytic spliceosome
SF0071011cellular_componentprecatalytic spliceosome
SF1990904cellular_componentribonucleoprotein complex
SG0003723molecular_functionRNA binding
SG0005515molecular_functionprotein binding
SG0005634cellular_componentnucleus
SG0005654cellular_componentnucleoplasm
SG0005730cellular_componentnucleolus
SG0006364biological_processrRNA processing
SG0030515molecular_functionsnoRNA binding
SG0031428cellular_componentbox C/D methylation guide snoRNP complex
SG0032040cellular_componentsmall-subunit processome
SG0034511molecular_functionU3 snoRNA binding
SG0042274biological_processribosomal small subunit biogenesis
SG1990904cellular_componentribonucleoprotein complex
SH0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH0000479biological_processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH0003824molecular_functioncatalytic activity
SH0004521molecular_functionRNA endonuclease activity
SH0005515molecular_functionprotein binding
SH0005634cellular_componentnucleus
SH0005654cellular_componentnucleoplasm
SH0005730cellular_componentnucleolus
SH0006396biological_processRNA processing
SH0008150biological_processbiological_process
SH0032040cellular_componentsmall-subunit processome
SH0042254biological_processribosome biogenesis
SH0042274biological_processribosomal small subunit biogenesis
SI0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SI0000479biological_processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SI0003723molecular_functionRNA binding
SI0003924molecular_functionGTPase activity
SI0005524molecular_functionATP binding
SI0005525molecular_functionGTP binding
SI0005634cellular_componentnucleus
SI0005654cellular_componentnucleoplasm
SI0005694cellular_componentchromosome
SI0005730cellular_componentnucleolus
SI0030686cellular_component90S preribosome
SI0032040cellular_componentsmall-subunit processome
SI0034511molecular_functionU3 snoRNA binding
SI0042254biological_processribosome biogenesis
SI0042274biological_processribosomal small subunit biogenesis
SJ0001824biological_processblastocyst development
SJ0003723molecular_functionRNA binding
SJ0005515molecular_functionprotein binding
SJ0005634cellular_componentnucleus
SJ0005654cellular_componentnucleoplasm
SJ0005694cellular_componentchromosome
SJ0005730cellular_componentnucleolus
SJ0005737cellular_componentcytoplasm
SJ0006364biological_processrRNA processing
SJ0008168molecular_functionmethyltransferase activity
SJ0017126biological_processnucleologenesis
SJ0019843molecular_functionrRNA binding
SJ0032040cellular_componentsmall-subunit processome
SJ0032259biological_processmethylation
SJ0042254biological_processribosome biogenesis
SJ0042274biological_processribosomal small subunit biogenesis
SJ0042802molecular_functionidentical protein binding
SJ0070037molecular_functionrRNA (pseudouridine) methyltransferase activity
SJ0070475biological_processrRNA base methylation
SK0001824biological_processblastocyst development
SK0003723molecular_functionRNA binding
SK0005515molecular_functionprotein binding
SK0005634cellular_componentnucleus
SK0005654cellular_componentnucleoplasm
SK0005694cellular_componentchromosome
SK0005730cellular_componentnucleolus
SK0005737cellular_componentcytoplasm
SK0006364biological_processrRNA processing
SK0008168molecular_functionmethyltransferase activity
SK0017126biological_processnucleologenesis
SK0019843molecular_functionrRNA binding
SK0032040cellular_componentsmall-subunit processome
SK0032259biological_processmethylation
SK0042254biological_processribosome biogenesis
SK0042274biological_processribosomal small subunit biogenesis
SK0042802molecular_functionidentical protein binding
SK0070037molecular_functionrRNA (pseudouridine) methyltransferase activity
SK0070475biological_processrRNA base methylation
SL0003723molecular_functionRNA binding
SL0005515molecular_functionprotein binding
SL0005634cellular_componentnucleus
SL0005654cellular_componentnucleoplasm
SL0005730cellular_componentnucleolus
SL0006364biological_processrRNA processing
SL0032040cellular_componentsmall-subunit processome
SL0042254biological_processribosome biogenesis
SL0042274biological_processribosomal small subunit biogenesis
SM0001650cellular_componentfibrillar center
SM0005515molecular_functionprotein binding
SM0005634cellular_componentnucleus
SM0005654cellular_componentnucleoplasm
SM0005730cellular_componentnucleolus
SM0006364biological_processrRNA processing
SM0019843molecular_functionrRNA binding
SM0030490biological_processmaturation of SSU-rRNA
SM0030515molecular_functionsnoRNA binding
SM0030684cellular_componentpreribosome
SM0032040cellular_componentsmall-subunit processome
SM0034457cellular_componentMpp10 complex
SM0042134molecular_functionrRNA primary transcript binding
SM0042254biological_processribosome biogenesis
SM0042274biological_processribosomal small subunit biogenesis
SM1990904cellular_componentribonucleoprotein complex
SP0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP0003723molecular_functionRNA binding
SP0005515molecular_functionprotein binding
SP0005634cellular_componentnucleus
SP0005654cellular_componentnucleoplasm
SP0005730cellular_componentnucleolus
SP0005737cellular_componentcytoplasm
SP0005886cellular_componentplasma membrane
SP0006364biological_processrRNA processing
SP0008285biological_processnegative regulation of cell population proliferation
SP0030686cellular_component90S preribosome
SP0030688cellular_componentpreribosome, small subunit precursor
SP0032040cellular_componentsmall-subunit processome
SP0042274biological_processribosomal small subunit biogenesis
SQ0003723molecular_functionRNA binding
SQ0005515molecular_functionprotein binding
SQ0005634cellular_componentnucleus
SQ0005654cellular_componentnucleoplasm
SQ0005694cellular_componentchromosome
SQ0005730cellular_componentnucleolus
SQ0006396biological_processRNA processing
SQ0032040cellular_componentsmall-subunit processome
SQ0042274biological_processribosomal small subunit biogenesis
SR0002181biological_processcytoplasmic translation
SR0003723molecular_functionRNA binding
SR0003735molecular_functionstructural constituent of ribosome
SR0005515molecular_functionprotein binding
SR0005634cellular_componentnucleus
SR0005654cellular_componentnucleoplasm
SR0005730cellular_componentnucleolus
SR0005737cellular_componentcytoplasm
SR0005783cellular_componentendoplasmic reticulum
SR0005791cellular_componentrough endoplasmic reticulum
SR0005829cellular_componentcytosol
SR0005840cellular_componentribosome
SR0006412biological_processtranslation
SR0015935cellular_componentsmall ribosomal subunit
SR0016020cellular_componentmembrane
SR0022626cellular_componentcytosolic ribosome
SR0022627cellular_componentcytosolic small ribosomal subunit
SR0032040cellular_componentsmall-subunit processome
SR0034063biological_processstress granule assembly
SR0042274biological_processribosomal small subunit biogenesis
SR0045202cellular_componentsynapse
SR1990145biological_processmaintenance of translational fidelity
SR1990904cellular_componentribonucleoprotein complex
SS0003723molecular_functionRNA binding
SS0005515molecular_functionprotein binding
SS0005634cellular_componentnucleus
SS0005654cellular_componentnucleoplasm
SS0005730cellular_componentnucleolus
SS0005829cellular_componentcytosol
SS0006364biological_processrRNA processing
SS0032040cellular_componentsmall-subunit processome
SS0042254biological_processribosome biogenesis
ST0032040cellular_componentsmall-subunit processome
SU0042254biological_processribosome biogenesis
SW0003676molecular_functionnucleic acid binding
SW0003723molecular_functionRNA binding
SW0005515molecular_functionprotein binding
SW0005634cellular_componentnucleus
SW0005654cellular_componentnucleoplasm
SW0005730cellular_componentnucleolus
SW0005829cellular_componentcytosol
SW0032040cellular_componentsmall-subunit processome
SW0042274biological_processribosomal small subunit biogenesis
SY0003723molecular_functionRNA binding
SY0005515molecular_functionprotein binding
SY0005615cellular_componentextracellular space
SY0005634cellular_componentnucleus
SY0005654cellular_componentnucleoplasm
SY0005730cellular_componentnucleolus
SY0005737cellular_componentcytoplasm
SY0006364biological_processrRNA processing
SY0007399biological_processnervous system development
SY0032040cellular_componentsmall-subunit processome
SY0042274biological_processribosomal small subunit biogenesis
SY0043065biological_processpositive regulation of apoptotic process
Functional Information from PROSITE/UniProt
site_idPS01189
Number of Residues19
DetailsRIBOSOMAL_S12E Ribosomal protein S12e signature. ALQevLktAlihDGLarGI
ChainResidueDetails
LAALA17-ILE35

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvAQiyAirqSiSKAL
ChainResidueDetails
LCGLY74-LEU92

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsMMmhgrnnGKKlmtvrIVkhA
ChainResidueDetails
L5GLU70-ALA96

site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
NTLYS27-ASP52

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG
ChainResidueDetails
L8ARG11-GLY30

site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG
ChainResidueDetails
NQLYS36-GLY68

site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE
ChainResidueDetails
LFPHE64-GLU86

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS
ChainResidueDetails
LDGLY123-SER135

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR
ChainResidueDetails
NOGLY100-ARG117

site_idPS00105
Number of Residues14
DetailsAA_TRANSFER_CLASS_1 Aminotransferases class-I pyridoxal-phosphate attachment site. SVGKivAAlNARAG
ChainResidueDetails
LWSER305-GLY318

site_idPS00178
Number of Residues11
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. Py.NAvIHLGHS
ChainResidueDetails
LWPRO327-SER337

site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK
ChainResidueDetails
L4HIS8-LYS22

site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
ChainResidueDetails
LGGLU60-LEU68

site_idPS00578
Number of Residues12
DetailsRIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM
ChainResidueDetails
L6ILE52-MET63

site_idPS00566
Number of Residues15
DetailsFIBRILLARIN Fibrillarin signature. GLVYAVEFShRsgRD
ChainResidueDetails
SCGLY185-ASP199

site_idPS00712
Number of Residues16
DetailsRIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH
ChainResidueDetails
NUILE41-HIS56

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY
ChainResidueDetails
NFVAL98-TYR128

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI
ChainResidueDetails
L9LEU106-ILE130

site_idPS01287
Number of Residues11
DetailsRTC RNA 3'-terminal phosphate cyclase signature. RGmpPgGGGeV
ChainResidueDetails
SHARG157-VAL167

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CedknVPYvfVrSKqaLG
ChainResidueDetails
SECYS73-GLY90

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
ChainResidueDetails
SRLYS60-ARG67

site_idPS00948
Number of Residues14
DetailsRIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH
ChainResidueDetails
L7ARG78-HIS91

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD
ChainResidueDetails
NGLEU116-ASP138

site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL
ChainResidueDetails
NMLEU62-LEU74

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. VVSGadDyTVKLWDI
ChainResidueDetails
LOILE388-THR402
LOLEU516-MET530
LJVAL137-ILE151
LSVAL397-VAL411
LUVAL82-LEU96
LTLEU637-LEU651
SGLEU256-VAL270
LQLEU122-VAL136
LQLEU206-ILE220
LRLEU124-ILE138
LRMET210-LEU224

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692
ChainResidueDetails
NYALA2
NHSER283
NHSER289
SKILE219
SJTHR176
SJGLY201
SJGLY206
SJILE219
NKGLN636
NKARG725

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
NYSER3
SGLYS25
SKARG128
SKARG132
SJARG84
SJARG125
SJARG128
SJARG132

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
SYLYS86
SYLYS120
SYLYS143
SYLYS144
SYLYS180
SYLYS211
SYLYS218
SYLYS235
SYLYS236
SYLYS246
NYSER5
SGSER51
SGSER53

site_idSWS_FT_FI4
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
NYLYS369
NKSER984
NKSER987
SDLYS205
SDLYS206
NYLYS24
SJALA2
NYLYS340

site_idSWS_FT_FI5
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
SQSER324
SQSER381
SGLYS113
SQSER148
SQSER194

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:21406692
ChainResidueDetails
LLSER590
SSSER405
SSSER407
LLSER437

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: Citrulline => ECO:0000250
ChainResidueDetails
SCLYS143
SCLYS158
SDLYS84
SDLYS102
SDLYS109
SDLYS131
SDLYS143
SDLYS158
SSARG433
SSARG589
SILYS399
SILYS646
SILYS1206

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17525332, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
SSSER437
SQSER569
SBLYS422
SBLYS426
SBLYS441
SBLYS444
SBLYS485
SQSER253

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
SSSER445
LKLYS384
LLLYS309
LLLYS384
SQSER330

site_idSWS_FT_FI10
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
SSSER453
SQSER512

site_idSWS_FT_FI11
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
ChainResidueDetails
NTLYS48
SSSER569

site_idSWS_FT_FI12
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
SSLYS122
SSLYS519
SQLYS257
SQLYS316
SQLYS321
SQLYS345
SQLYS384
SQLYS584
SQLYS606
SQLYS731
SSLYS449

site_idSWS_FT_FI13
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:28112733
ChainResidueDetails
SQLYS558
SSLYS733
SQLYS658

site_idSWS_FT_FI14
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:28112733
ChainResidueDetails
SQLYS649
SQLYS686

site_idSWS_FT_FI15
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106
ChainResidueDetails
NTLYS63

site_idSWS_FT_FI16
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
ChainResidueDetails
NTGLY76

site_idSWS_FT_FI17
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36638793
ChainResidueDetails
NTLYS107

221051

PDB entries from 2024-06-12

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