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7KXT

Crystal structure of human EED

Functional Information from GO Data
ChainGOidnamespacecontents
A0000122biological_processnegative regulation of transcription by RNA polymerase II
A0001222molecular_functiontranscription corepressor binding
A0001739cellular_componentsex chromatin
A0003682molecular_functionchromatin binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005677cellular_componentchromatin silencing complex
A0005694cellular_componentchromosome
A0005829cellular_componentcytosol
A0006325biological_processchromatin organization
A0008047molecular_functionenzyme activator activity
A0021510biological_processspinal cord development
A0031491molecular_functionnucleosome binding
A0031507biological_processheterochromatin formation
A0035064molecular_functionobsolete methylated histone binding
A0035098cellular_componentESC/E(Z) complex
A0042802molecular_functionidentical protein binding
A0045120cellular_componentpronucleus
A0045892biological_processnegative regulation of DNA-templated transcription
A0048709biological_processoligodendrocyte differentiation
A0071514biological_processgenomic imprinting
A0140718biological_processfacultative heterochromatin formation
A1990830biological_processcellular response to leukemia inhibitory factor
A2000011biological_processregulation of adaxial/abaxial pattern formation
B0000122biological_processnegative regulation of transcription by RNA polymerase II
B0001222molecular_functiontranscription corepressor binding
B0001739cellular_componentsex chromatin
B0003682molecular_functionchromatin binding
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005677cellular_componentchromatin silencing complex
B0005694cellular_componentchromosome
B0005829cellular_componentcytosol
B0006325biological_processchromatin organization
B0008047molecular_functionenzyme activator activity
B0021510biological_processspinal cord development
B0031491molecular_functionnucleosome binding
B0031507biological_processheterochromatin formation
B0035064molecular_functionobsolete methylated histone binding
B0035098cellular_componentESC/E(Z) complex
B0042802molecular_functionidentical protein binding
B0045120cellular_componentpronucleus
B0045892biological_processnegative regulation of DNA-templated transcription
B0048709biological_processoligodendrocyte differentiation
B0071514biological_processgenomic imprinting
B0140718biological_processfacultative heterochromatin formation
B1990830biological_processcellular response to leukemia inhibitory factor
B2000011biological_processregulation of adaxial/abaxial pattern formation
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue XB7 A 501
ChainResidue
ALEU246
AVAL393
AGLU394
APRO396
AHIS397
BGLU394
BASP395
ALEU315
AGLY316
ALEU318
AMET336
APHE356
APHE372
ATRP373
ALEU391

site_idAC2
Number of Residues14
Detailsbinding site for residue XB7 B 501
ChainResidue
BLEU246
BLEU315
BGLY316
BMET336
BPHE356
BPHE372
BTRP373
BGLN374
BLEU391
BVAL393
BGLU394
BPRO396
BHIS397
BHOH631

Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LLSVskDhALRLWNI
ChainResidueDetails
ALEU206-ILE220

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues43
DetailsRepeat: {"description":"WD 1"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues86
DetailsRepeat: {"description":"WD 2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues80
DetailsRepeat: {"description":"WD 3"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues82
DetailsRepeat: {"description":"WD 4"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues74
DetailsRepeat: {"description":"WD 5"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues80
DetailsRepeat: {"description":"WD 6"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues33
DetailsRepeat: {"description":"WD 7"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues360
DetailsRegion: {"description":"Interaction with EZH2","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues448
DetailsRegion: {"description":"Required for interaction with the matrix protein MA of HIV-1"}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues6
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"20974918","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

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