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7KRA

Cryo-EM structure of Saccharomyces cerevisiae ER membrane protein complex bound to Fab-DH4 in lipid nanodiscs

Functional Information from GO Data
ChainGOidnamespacecontents
A0072546cellular_componentEMC complex
B0003674molecular_functionmolecular_function
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005783cellular_componentendoplasmic reticulum
B0005789cellular_componentendoplasmic reticulum membrane
B0006644biological_processphospholipid metabolic process
B0015914biological_processphospholipid transport
B0016020cellular_componentmembrane
B0032977molecular_functionmembrane insertase activity
B0034975biological_processprotein folding in endoplasmic reticulum
B0045050biological_processprotein insertion into ER membrane by stop-transfer membrane-anchor sequence
B0072546cellular_componentEMC complex
C0003674molecular_functionmolecular_function
C0005783cellular_componentendoplasmic reticulum
C0005789cellular_componentendoplasmic reticulum membrane
C0006644biological_processphospholipid metabolic process
C0015914biological_processphospholipid transport
C0016020cellular_componentmembrane
C0032977molecular_functionmembrane insertase activity
C0034975biological_processprotein folding in endoplasmic reticulum
C0045050biological_processprotein insertion into ER membrane by stop-transfer membrane-anchor sequence
C0051087molecular_functionprotein-folding chaperone binding
C0072546cellular_componentEMC complex
D0003674molecular_functionmolecular_function
D0005783cellular_componentendoplasmic reticulum
D0005789cellular_componentendoplasmic reticulum membrane
D0006644biological_processphospholipid metabolic process
D0015914biological_processphospholipid transport
D0016020cellular_componentmembrane
D0032977molecular_functionmembrane insertase activity
D0034975biological_processprotein folding in endoplasmic reticulum
D0045050biological_processprotein insertion into ER membrane by stop-transfer membrane-anchor sequence
D0072546cellular_componentEMC complex
E0003674molecular_functionmolecular_function
E0005515molecular_functionprotein binding
E0005783cellular_componentendoplasmic reticulum
E0005789cellular_componentendoplasmic reticulum membrane
E0006644biological_processphospholipid metabolic process
E0015914biological_processphospholipid transport
E0016020cellular_componentmembrane
E0032977molecular_functionmembrane insertase activity
E0034975biological_processprotein folding in endoplasmic reticulum
E0045050biological_processprotein insertion into ER membrane by stop-transfer membrane-anchor sequence
E0072546cellular_componentEMC complex
F0000045biological_processautophagosome assembly
F0003674molecular_functionmolecular_function
F0005783cellular_componentendoplasmic reticulum
F0005789cellular_componentendoplasmic reticulum membrane
F0006644biological_processphospholipid metabolic process
F0015914biological_processphospholipid transport
F0016020cellular_componentmembrane
F0032977molecular_functionmembrane insertase activity
F0034975biological_processprotein folding in endoplasmic reticulum
F0045050biological_processprotein insertion into ER membrane by stop-transfer membrane-anchor sequence
F0072546cellular_componentEMC complex
Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
ChainResidueDetails
ITYR206-HIS212
JTYR212-HIS218

site_idPS00923
Number of Residues10
DetailsASP_GLU_RACEMASE_1 Aspartate and glutamate racemases signature 1. AMvCvNSSSN
ChainResidueDetails
AALA101-ASN110

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues154
DetailsTOPO_DOM: Lumenal => ECO:0000250|UniProtKB:Q5UCC4
ChainResidueDetails
HALA18-ASN172
ELYS70-LYS141
CSER176-LEU196

site_idSWS_FT_FI2
Number of Residues17
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
HTRP173-ALA190
FGLY49-CYS69
FSER88-LEU106

site_idSWS_FT_FI3
Number of Residues14
DetailsTOPO_DOM: Cytoplasmic => ECO:0000250|UniProtKB:Q5UCC4
ChainResidueDetails
HLYS191-GLU205
FILE107-GLY108

site_idSWS_FT_FI4
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
HASN47
GASN53
GASN85
GASN115
GASN170
AASN443
AASN574
AASN578

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PDB entries from 2024-07-10

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