7DSX
Structure of a human NHE1-CHP1 complex under pH 7.5, bound by cariporide
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006812 | biological_process | monoatomic cation transport |
| A | 0006814 | biological_process | sodium ion transport |
| A | 0006885 | biological_process | regulation of pH |
| A | 0015297 | molecular_function | antiporter activity |
| A | 0015385 | molecular_function | sodium:proton antiporter activity |
| A | 0016020 | cellular_component | membrane |
| A | 0055085 | biological_process | transmembrane transport |
| A | 1902600 | biological_process | proton transmembrane transport |
| B | 0006812 | biological_process | monoatomic cation transport |
| B | 0006814 | biological_process | sodium ion transport |
| B | 0006885 | biological_process | regulation of pH |
| B | 0015297 | molecular_function | antiporter activity |
| B | 0015385 | molecular_function | sodium:proton antiporter activity |
| B | 0016020 | cellular_component | membrane |
| B | 0055085 | biological_process | transmembrane transport |
| B | 1902600 | biological_process | proton transmembrane transport |
| C | 0000139 | cellular_component | Golgi membrane |
| C | 0001578 | biological_process | microtubule bundle formation |
| C | 0001933 | biological_process | negative regulation of protein phosphorylation |
| C | 0004860 | molecular_function | protein kinase inhibitor activity |
| C | 0005509 | molecular_function | calcium ion binding |
| C | 0005515 | molecular_function | protein binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005783 | cellular_component | endoplasmic reticulum |
| C | 0005793 | cellular_component | endoplasmic reticulum-Golgi intermediate compartment |
| C | 0005856 | cellular_component | cytoskeleton |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0005925 | cellular_component | focal adhesion |
| C | 0006469 | biological_process | negative regulation of protein kinase activity |
| C | 0006611 | biological_process | protein export from nucleus |
| C | 0006813 | biological_process | potassium ion transport |
| C | 0006883 | biological_process | intracellular sodium ion homeostasis |
| C | 0007264 | biological_process | small GTPase-mediated signal transduction |
| C | 0008017 | molecular_function | microtubule binding |
| C | 0010560 | biological_process | positive regulation of glycoprotein biosynthetic process |
| C | 0010923 | biological_process | negative regulation of phosphatase activity |
| C | 0012505 | cellular_component | endomembrane system |
| C | 0015031 | biological_process | protein transport |
| C | 0015385 | molecular_function | sodium:proton antiporter activity |
| C | 0015459 | molecular_function | potassium channel regulator activity |
| C | 0015630 | cellular_component | microtubule cytoskeleton |
| C | 0016020 | cellular_component | membrane |
| C | 0016323 | cellular_component | basolateral plasma membrane |
| C | 0019900 | molecular_function | kinase binding |
| C | 0022406 | biological_process | membrane docking |
| C | 0030133 | cellular_component | transport vesicle |
| C | 0031122 | biological_process | cytoplasmic microtubule organization |
| C | 0031397 | biological_process | negative regulation of protein ubiquitination |
| C | 0031953 | biological_process | negative regulation of protein autophosphorylation |
| C | 0032088 | biological_process | negative regulation of NF-kappaB transcription factor activity |
| C | 0032417 | biological_process | positive regulation of sodium:proton antiporter activity |
| C | 0035725 | biological_process | sodium ion transmembrane transport |
| C | 0042306 | biological_process | regulation of protein import into nucleus |
| C | 0042308 | biological_process | negative regulation of protein import into nucleus |
| C | 0045121 | cellular_component | membrane raft |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0048306 | molecular_function | calcium-dependent protein binding |
| C | 0050821 | biological_process | protein stabilization |
| C | 0051222 | biological_process | positive regulation of protein transport |
| C | 0051453 | biological_process | regulation of intracellular pH |
| C | 0061024 | biological_process | membrane organization |
| C | 0061025 | biological_process | membrane fusion |
| C | 0070062 | cellular_component | extracellular exosome |
| C | 0070884 | biological_process | regulation of calcineurin-NFAT signaling cascade |
| C | 0070885 | biological_process | negative regulation of calcineurin-NFAT signaling cascade |
| C | 0071073 | biological_process | positive regulation of phospholipid biosynthetic process |
| C | 0071468 | biological_process | cellular response to acidic pH |
| C | 0090314 | biological_process | positive regulation of protein targeting to membrane |
| C | 1990351 | cellular_component | transporter complex |
| D | 0000139 | cellular_component | Golgi membrane |
| D | 0001578 | biological_process | microtubule bundle formation |
| D | 0001933 | biological_process | negative regulation of protein phosphorylation |
| D | 0004860 | molecular_function | protein kinase inhibitor activity |
| D | 0005509 | molecular_function | calcium ion binding |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005783 | cellular_component | endoplasmic reticulum |
| D | 0005793 | cellular_component | endoplasmic reticulum-Golgi intermediate compartment |
| D | 0005856 | cellular_component | cytoskeleton |
| D | 0005886 | cellular_component | plasma membrane |
| D | 0005925 | cellular_component | focal adhesion |
| D | 0006469 | biological_process | negative regulation of protein kinase activity |
| D | 0006611 | biological_process | protein export from nucleus |
| D | 0006813 | biological_process | potassium ion transport |
| D | 0006883 | biological_process | intracellular sodium ion homeostasis |
| D | 0007264 | biological_process | small GTPase-mediated signal transduction |
| D | 0008017 | molecular_function | microtubule binding |
| D | 0010560 | biological_process | positive regulation of glycoprotein biosynthetic process |
| D | 0010923 | biological_process | negative regulation of phosphatase activity |
| D | 0012505 | cellular_component | endomembrane system |
| D | 0015031 | biological_process | protein transport |
| D | 0015385 | molecular_function | sodium:proton antiporter activity |
| D | 0015459 | molecular_function | potassium channel regulator activity |
| D | 0015630 | cellular_component | microtubule cytoskeleton |
| D | 0016020 | cellular_component | membrane |
| D | 0016323 | cellular_component | basolateral plasma membrane |
| D | 0019900 | molecular_function | kinase binding |
| D | 0022406 | biological_process | membrane docking |
| D | 0030133 | cellular_component | transport vesicle |
| D | 0031122 | biological_process | cytoplasmic microtubule organization |
| D | 0031397 | biological_process | negative regulation of protein ubiquitination |
| D | 0031953 | biological_process | negative regulation of protein autophosphorylation |
| D | 0032088 | biological_process | negative regulation of NF-kappaB transcription factor activity |
| D | 0032417 | biological_process | positive regulation of sodium:proton antiporter activity |
| D | 0035725 | biological_process | sodium ion transmembrane transport |
| D | 0042306 | biological_process | regulation of protein import into nucleus |
| D | 0042308 | biological_process | negative regulation of protein import into nucleus |
| D | 0045121 | cellular_component | membrane raft |
| D | 0046872 | molecular_function | metal ion binding |
| D | 0048306 | molecular_function | calcium-dependent protein binding |
| D | 0050821 | biological_process | protein stabilization |
| D | 0051222 | biological_process | positive regulation of protein transport |
| D | 0051453 | biological_process | regulation of intracellular pH |
| D | 0061024 | biological_process | membrane organization |
| D | 0061025 | biological_process | membrane fusion |
| D | 0070062 | cellular_component | extracellular exosome |
| D | 0070884 | biological_process | regulation of calcineurin-NFAT signaling cascade |
| D | 0070885 | biological_process | negative regulation of calcineurin-NFAT signaling cascade |
| D | 0071073 | biological_process | positive regulation of phospholipid biosynthetic process |
| D | 0071468 | biological_process | cellular response to acidic pH |
| D | 0090314 | biological_process | positive regulation of protein targeting to membrane |
| D | 1990351 | cellular_component | transporter complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | binding site for residue PGT B 1001 |
| Chain | Residue |
| A | LEU332 |
| B | PGT1002 |
| A | PGT601 |
| B | TRP108 |
| B | ILE109 |
| B | MET385 |
| B | TRP386 |
| B | VAL389 |
| B | LEU393 |
| B | PHE397 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue PGT B 1002 |
| Chain | Residue |
| B | ILE105 |
| B | VAL160 |
| B | PHE164 |
| B | TYR339 |
| B | TRP386 |
| B | PGT1001 |
| B | PGT1004 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | binding site for residue HG0 B 1003 |
| Chain | Residue |
| A | ASP95 |
| B | SER158 |
| B | ASP159 |
| B | PHE162 |
| B | LEU163 |
| B | ASP267 |
| B | VAL271 |
| B | GLU346 |
| B | LEU468 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue PGT B 1004 |
| Chain | Residue |
| A | ILE105 |
| A | PGT601 |
| A | PGT602 |
| B | PHE335 |
| B | TYR339 |
| B | PGT1002 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue PGT A 601 |
| Chain | Residue |
| A | PHE335 |
| A | TYR339 |
| A | PGT603 |
| B | ILE105 |
| B | PGT1001 |
| B | PGT1004 |
| site_id | AC6 |
| Number of Residues | 10 |
| Details | binding site for residue PGT A 602 |
| Chain | Residue |
| A | TRP108 |
| A | ILE109 |
| A | MET385 |
| A | TRP386 |
| A | VAL389 |
| A | LEU393 |
| A | PHE397 |
| A | PGT603 |
| B | LEU332 |
| B | PGT1004 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue PGT A 603 |
| Chain | Residue |
| A | ILE105 |
| A | VAL160 |
| A | PHE164 |
| A | TYR339 |
| A | TRP386 |
| A | PGT601 |
| A | PGT602 |
| site_id | AC8 |
| Number of Residues | 9 |
| Details | binding site for residue HG0 A 604 |
| Chain | Residue |
| A | SER158 |
| A | ASP159 |
| A | PHE162 |
| A | LEU163 |
| A | ASP267 |
| A | VAL271 |
| A | GLU346 |
| A | LEU468 |
| B | ASP95 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 70 |
| Details | Domain: {"description":"EF-hand 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00448","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 70 |
| Details | Domain: {"description":"EF-hand 2","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 70 |
| Details | Domain: {"description":"EF-hand 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00448","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 70 |
| Details | Domain: {"description":"EF-hand 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00448","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 84 |
| Details | Region: {"description":"Necessary for nuclear export signal"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 18 |
| Details | Motif: {"description":"Nuclear export signal 1","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 18 |
| Details | Motif: {"description":"Nuclear export signal 2","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 18 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 44 |
| Details | Transmembrane: {"description":"Helical; Name=1","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 60 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 34 |
| Details | Transmembrane: {"description":"Helical; Name=2","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 72 |
| Details | Topological domain: {"description":"Extracellular","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 34 |
| Details | Transmembrane: {"description":"Helical; Name=3","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 56 |
| Details | Transmembrane: {"description":"Helical; Name=4","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 52 |
| Details | Transmembrane: {"description":"Helical; Name=5","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 60 |
| Details | Transmembrane: {"description":"Helical; Name=6","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 68 |
| Details | Transmembrane: {"description":"Helical; Name=7","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 24 |
| Details | Transmembrane: {"description":"Helical; Name=8","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 40 |
| Details | Transmembrane: {"description":"Helical; Name=9","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 60 |
| Details | Transmembrane: {"description":"Helical; Name=10","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 54 |
| Details | Transmembrane: {"description":"Helical; Name=11","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 48 |
| Details | Transmembrane: {"description":"Helical; Name=12","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 58 |
| Details | Transmembrane: {"description":"Helical; Name=13","evidences":[{"source":"PubMed","id":"34108458","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DSW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 84 |
| Details | Region: {"description":"Interaction with TESC","evidences":[{"source":"PubMed","id":"30287853","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 30 |
| Details | Region: {"description":"PI(4,5)P2-binding region","evidences":[{"source":"UniProtKB","id":"P26431","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 60 |
| Details | Region: {"description":"Interaction with CHP2","evidences":[{"source":"PubMed","id":"21392185","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 10 |
| Details | Region: {"description":"Confers pH-dependent PI(4,5)P2 binding","evidences":[{"source":"PubMed","id":"27650500","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 2 |
| Details | Site: {"description":"Channel pore-lining","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 2 |
| Details | Site: {"description":"Not glycosylated"} |
| Chain | Residue | Details |






