7AA9

Structure of SCOC pT13/pT15 LIR motif bound to GABARAPL1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000045	biological_process	autophagosome assembly
A	0000421	cellular_component	autophagosome membrane
A	0000423	biological_process	mitophagy
A	0005515	molecular_function	protein binding
A	0005543	molecular_function	phospholipid binding
A	0005739	cellular_component	mitochondrion
A	0005776	cellular_component	autophagosome
A	0005783	cellular_component	endoplasmic reticulum
A	0005794	cellular_component	Golgi apparatus
A	0005829	cellular_component	cytosol
A	0005856	cellular_component	cytoskeleton
A	0005874	cellular_component	microtubule
A	0005886	cellular_component	plasma membrane
A	0005929	cellular_component	cilium
A	0006914	biological_process	autophagy
A	0006995	biological_process	cellular response to nitrogen starvation
A	0008429	molecular_function	phosphatidylethanolamine binding
A	0030659	cellular_component	cytoplasmic vesicle membrane
A	0030957	molecular_function	Tat protein binding
A	0031410	cellular_component	cytoplasmic vesicle
A	0031625	molecular_function	ubiquitin protein ligase binding
A	0036064	cellular_component	ciliary basal body
A	0048487	molecular_function	beta-tubulin binding
A	0050811	molecular_function	GABA receptor binding
A	0061723	biological_process	glycophagy
A	0097352	biological_process	autophagosome maturation
C	0000045	biological_process	autophagosome assembly
C	0000421	cellular_component	autophagosome membrane
C	0000423	biological_process	mitophagy
C	0005515	molecular_function	protein binding
C	0005543	molecular_function	phospholipid binding
C	0005739	cellular_component	mitochondrion
C	0005776	cellular_component	autophagosome
C	0005783	cellular_component	endoplasmic reticulum
C	0005794	cellular_component	Golgi apparatus
C	0005829	cellular_component	cytosol
C	0005856	cellular_component	cytoskeleton
C	0005874	cellular_component	microtubule
C	0005886	cellular_component	plasma membrane
C	0005929	cellular_component	cilium
C	0006914	biological_process	autophagy
C	0006995	biological_process	cellular response to nitrogen starvation
C	0008429	molecular_function	phosphatidylethanolamine binding
C	0030659	cellular_component	cytoplasmic vesicle membrane
C	0030957	molecular_function	Tat protein binding
C	0031410	cellular_component	cytoplasmic vesicle
C	0031625	molecular_function	ubiquitin protein ligase binding
C	0036064	cellular_component	ciliary basal body
C	0048487	molecular_function	beta-tubulin binding
C	0050811	molecular_function	GABA receptor binding
C	0061723	biological_process	glycophagy
C	0097352	biological_process	autophagosome maturation
E	0000045	biological_process	autophagosome assembly
E	0000421	cellular_component	autophagosome membrane
E	0000423	biological_process	mitophagy
E	0005515	molecular_function	protein binding
E	0005543	molecular_function	phospholipid binding
E	0005739	cellular_component	mitochondrion
E	0005776	cellular_component	autophagosome
E	0005783	cellular_component	endoplasmic reticulum
E	0005794	cellular_component	Golgi apparatus
E	0005829	cellular_component	cytosol
E	0005856	cellular_component	cytoskeleton
E	0005874	cellular_component	microtubule
E	0005886	cellular_component	plasma membrane
E	0005929	cellular_component	cilium
E	0006914	biological_process	autophagy
E	0006995	biological_process	cellular response to nitrogen starvation
E	0008429	molecular_function	phosphatidylethanolamine binding
E	0030659	cellular_component	cytoplasmic vesicle membrane
E	0030957	molecular_function	Tat protein binding
E	0031410	cellular_component	cytoplasmic vesicle
E	0031625	molecular_function	ubiquitin protein ligase binding
E	0036064	cellular_component	ciliary basal body
E	0048487	molecular_function	beta-tubulin binding
E	0050811	molecular_function	GABA receptor binding
E	0061723	biological_process	glycophagy
E	0097352	biological_process	autophagosome maturation
G	0000045	biological_process	autophagosome assembly
G	0000421	cellular_component	autophagosome membrane
G	0000423	biological_process	mitophagy
G	0005515	molecular_function	protein binding
G	0005543	molecular_function	phospholipid binding
G	0005739	cellular_component	mitochondrion
G	0005776	cellular_component	autophagosome
G	0005783	cellular_component	endoplasmic reticulum
G	0005794	cellular_component	Golgi apparatus
G	0005829	cellular_component	cytosol
G	0005856	cellular_component	cytoskeleton
G	0005874	cellular_component	microtubule
G	0005886	cellular_component	plasma membrane
G	0005929	cellular_component	cilium
G	0006914	biological_process	autophagy
G	0006995	biological_process	cellular response to nitrogen starvation
G	0008429	molecular_function	phosphatidylethanolamine binding
G	0030659	cellular_component	cytoplasmic vesicle membrane
G	0030957	molecular_function	Tat protein binding
G	0031410	cellular_component	cytoplasmic vesicle
G	0031625	molecular_function	ubiquitin protein ligase binding
G	0036064	cellular_component	ciliary basal body
G	0048487	molecular_function	beta-tubulin binding
G	0050811	molecular_function	GABA receptor binding
G	0061723	biological_process	glycophagy
G	0097352	biological_process	autophagosome maturation
I	0000045	biological_process	autophagosome assembly
I	0000421	cellular_component	autophagosome membrane
I	0000423	biological_process	mitophagy
I	0005515	molecular_function	protein binding
I	0005543	molecular_function	phospholipid binding
I	0005739	cellular_component	mitochondrion
I	0005776	cellular_component	autophagosome
I	0005783	cellular_component	endoplasmic reticulum
I	0005794	cellular_component	Golgi apparatus
I	0005829	cellular_component	cytosol
I	0005856	cellular_component	cytoskeleton
I	0005874	cellular_component	microtubule
I	0005886	cellular_component	plasma membrane
I	0005929	cellular_component	cilium
I	0006914	biological_process	autophagy
I	0006995	biological_process	cellular response to nitrogen starvation
I	0008429	molecular_function	phosphatidylethanolamine binding
I	0030659	cellular_component	cytoplasmic vesicle membrane
I	0030957	molecular_function	Tat protein binding
I	0031410	cellular_component	cytoplasmic vesicle
I	0031625	molecular_function	ubiquitin protein ligase binding
I	0036064	cellular_component	ciliary basal body
I	0048487	molecular_function	beta-tubulin binding
I	0050811	molecular_function	GABA receptor binding
I	0061723	biological_process	glycophagy
I	0097352	biological_process	autophagosome maturation
K	0000045	biological_process	autophagosome assembly
K	0000421	cellular_component	autophagosome membrane
K	0000423	biological_process	mitophagy
K	0005515	molecular_function	protein binding
K	0005543	molecular_function	phospholipid binding
K	0005739	cellular_component	mitochondrion
K	0005776	cellular_component	autophagosome
K	0005783	cellular_component	endoplasmic reticulum
K	0005794	cellular_component	Golgi apparatus
K	0005829	cellular_component	cytosol
K	0005856	cellular_component	cytoskeleton
K	0005874	cellular_component	microtubule
K	0005886	cellular_component	plasma membrane
K	0005929	cellular_component	cilium
K	0006914	biological_process	autophagy
K	0006995	biological_process	cellular response to nitrogen starvation
K	0008429	molecular_function	phosphatidylethanolamine binding
K	0030659	cellular_component	cytoplasmic vesicle membrane
K	0030957	molecular_function	Tat protein binding
K	0031410	cellular_component	cytoplasmic vesicle
K	0031625	molecular_function	ubiquitin protein ligase binding
K	0036064	cellular_component	ciliary basal body
K	0048487	molecular_function	beta-tubulin binding
K	0050811	molecular_function	GABA receptor binding
K	0061723	biological_process	glycophagy
K	0097352	biological_process	autophagosome maturation

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	5
Details	Propeptide: {"description":"Removed in mature form","featureId":"PRO_0000420208","evidences":[{"source":"PubMed","id":"20404487","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	5
Details	Site: {"description":"(Microbial infection) Cleavage; by RavZ","evidences":[{"source":"PubMed","id":"23112293","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	5
Details	Site: {"description":"Cleavage; by ATG4B","evidences":[{"source":"PubMed","id":"20404487","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	5
Details	Lipidation: {"description":"Phosphatidylserine amidated glycine; alternate","evidences":[{"source":"PubMed","id":"33909989","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---