7AA9

Structure of SCOC pT13/pT15 LIR motif bound to GABARAPL1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000045	biological_process	autophagosome assembly
A	0000421	cellular_component	autophagosome membrane
A	0005515	molecular_function	protein binding
A	0005543	molecular_function	phospholipid binding
A	0005737	cellular_component	cytoplasm
A	0005739	cellular_component	mitochondrion
A	0005776	cellular_component	autophagosome
A	0005783	cellular_component	endoplasmic reticulum
A	0005794	cellular_component	Golgi apparatus
A	0005829	cellular_component	cytosol
A	0005856	cellular_component	cytoskeleton
A	0005874	cellular_component	microtubule
A	0006914	biological_process	autophagy
A	0006995	biological_process	cellular response to nitrogen starvation
A	0008429	molecular_function	phosphatidylethanolamine binding
A	0016020	cellular_component	membrane
A	0030659	cellular_component	cytoplasmic vesicle membrane
A	0030957	molecular_function	Tat protein binding
A	0031410	cellular_component	cytoplasmic vesicle
A	0031625	molecular_function	ubiquitin protein ligase binding
A	0048487	molecular_function	beta-tubulin binding
A	0050811	molecular_function	GABA receptor binding
A	0061723	biological_process	glycophagy
A	0097352	biological_process	autophagosome maturation
C	0000045	biological_process	autophagosome assembly
C	0000421	cellular_component	autophagosome membrane
C	0005515	molecular_function	protein binding
C	0005543	molecular_function	phospholipid binding
C	0005737	cellular_component	cytoplasm
C	0005739	cellular_component	mitochondrion
C	0005776	cellular_component	autophagosome
C	0005783	cellular_component	endoplasmic reticulum
C	0005794	cellular_component	Golgi apparatus
C	0005829	cellular_component	cytosol
C	0005856	cellular_component	cytoskeleton
C	0005874	cellular_component	microtubule
C	0006914	biological_process	autophagy
C	0006995	biological_process	cellular response to nitrogen starvation
C	0008429	molecular_function	phosphatidylethanolamine binding
C	0016020	cellular_component	membrane
C	0030659	cellular_component	cytoplasmic vesicle membrane
C	0030957	molecular_function	Tat protein binding
C	0031410	cellular_component	cytoplasmic vesicle
C	0031625	molecular_function	ubiquitin protein ligase binding
C	0048487	molecular_function	beta-tubulin binding
C	0050811	molecular_function	GABA receptor binding
C	0061723	biological_process	glycophagy
C	0097352	biological_process	autophagosome maturation
E	0000045	biological_process	autophagosome assembly
E	0000421	cellular_component	autophagosome membrane
E	0005515	molecular_function	protein binding
E	0005543	molecular_function	phospholipid binding
E	0005737	cellular_component	cytoplasm
E	0005739	cellular_component	mitochondrion
E	0005776	cellular_component	autophagosome
E	0005783	cellular_component	endoplasmic reticulum
E	0005794	cellular_component	Golgi apparatus
E	0005829	cellular_component	cytosol
E	0005856	cellular_component	cytoskeleton
E	0005874	cellular_component	microtubule
E	0006914	biological_process	autophagy
E	0006995	biological_process	cellular response to nitrogen starvation
E	0008429	molecular_function	phosphatidylethanolamine binding
E	0016020	cellular_component	membrane
E	0030659	cellular_component	cytoplasmic vesicle membrane
E	0030957	molecular_function	Tat protein binding
E	0031410	cellular_component	cytoplasmic vesicle
E	0031625	molecular_function	ubiquitin protein ligase binding
E	0048487	molecular_function	beta-tubulin binding
E	0050811	molecular_function	GABA receptor binding
E	0061723	biological_process	glycophagy
E	0097352	biological_process	autophagosome maturation
G	0000045	biological_process	autophagosome assembly
G	0000421	cellular_component	autophagosome membrane
G	0005515	molecular_function	protein binding
G	0005543	molecular_function	phospholipid binding
G	0005737	cellular_component	cytoplasm
G	0005739	cellular_component	mitochondrion
G	0005776	cellular_component	autophagosome
G	0005783	cellular_component	endoplasmic reticulum
G	0005794	cellular_component	Golgi apparatus
G	0005829	cellular_component	cytosol
G	0005856	cellular_component	cytoskeleton
G	0005874	cellular_component	microtubule
G	0006914	biological_process	autophagy
G	0006995	biological_process	cellular response to nitrogen starvation
G	0008429	molecular_function	phosphatidylethanolamine binding
G	0016020	cellular_component	membrane
G	0030659	cellular_component	cytoplasmic vesicle membrane
G	0030957	molecular_function	Tat protein binding
G	0031410	cellular_component	cytoplasmic vesicle
G	0031625	molecular_function	ubiquitin protein ligase binding
G	0048487	molecular_function	beta-tubulin binding
G	0050811	molecular_function	GABA receptor binding
G	0061723	biological_process	glycophagy
G	0097352	biological_process	autophagosome maturation
I	0000045	biological_process	autophagosome assembly
I	0000421	cellular_component	autophagosome membrane
I	0005515	molecular_function	protein binding
I	0005543	molecular_function	phospholipid binding
I	0005737	cellular_component	cytoplasm
I	0005739	cellular_component	mitochondrion
I	0005776	cellular_component	autophagosome
I	0005783	cellular_component	endoplasmic reticulum
I	0005794	cellular_component	Golgi apparatus
I	0005829	cellular_component	cytosol
I	0005856	cellular_component	cytoskeleton
I	0005874	cellular_component	microtubule
I	0006914	biological_process	autophagy
I	0006995	biological_process	cellular response to nitrogen starvation
I	0008429	molecular_function	phosphatidylethanolamine binding
I	0016020	cellular_component	membrane
I	0030659	cellular_component	cytoplasmic vesicle membrane
I	0030957	molecular_function	Tat protein binding
I	0031410	cellular_component	cytoplasmic vesicle
I	0031625	molecular_function	ubiquitin protein ligase binding
I	0048487	molecular_function	beta-tubulin binding
I	0050811	molecular_function	GABA receptor binding
I	0061723	biological_process	glycophagy
I	0097352	biological_process	autophagosome maturation
K	0000045	biological_process	autophagosome assembly
K	0000421	cellular_component	autophagosome membrane
K	0005515	molecular_function	protein binding
K	0005543	molecular_function	phospholipid binding
K	0005737	cellular_component	cytoplasm
K	0005739	cellular_component	mitochondrion
K	0005776	cellular_component	autophagosome
K	0005783	cellular_component	endoplasmic reticulum
K	0005794	cellular_component	Golgi apparatus
K	0005829	cellular_component	cytosol
K	0005856	cellular_component	cytoskeleton
K	0005874	cellular_component	microtubule
K	0006914	biological_process	autophagy
K	0006995	biological_process	cellular response to nitrogen starvation
K	0008429	molecular_function	phosphatidylethanolamine binding
K	0016020	cellular_component	membrane
K	0030659	cellular_component	cytoplasmic vesicle membrane
K	0030957	molecular_function	Tat protein binding
K	0031410	cellular_component	cytoplasmic vesicle
K	0031625	molecular_function	ubiquitin protein ligase binding
K	0048487	molecular_function	beta-tubulin binding
K	0050811	molecular_function	GABA receptor binding
K	0061723	biological_process	glycophagy
K	0097352	biological_process	autophagosome maturation

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	SITE: (Microbial infection) Cleavage; by RavZ => ECO:0000269|PubMed:23112293

Chain	Residue	Details
C	TYR115
E	TYR115
G	TYR115
I	TYR115
K	TYR115
A	TYR115

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site_id	SWS_FT_FI2
Number of Residues	6
Details	SITE: Cleavage; by ATG4B => ECO:0000269|PubMed:20404487

Chain	Residue	Details
C	GLY116
E	GLY116
G	GLY116
I	GLY116
K	GLY116
A	GLY116

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site_id	SWS_FT_FI3
Number of Residues	6
Details	LIPID: Phosphatidylserine amidated glycine; alternate => ECO:0000269|PubMed:33909989

Chain	Residue	Details
C	GLY116
E	GLY116
G	GLY116
I	GLY116
K	GLY116
A	GLY116

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