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7AA9

Structure of SCOC pT13/pT15 LIR motif bound to GABARAPL1

Functional Information from GO Data
ChainGOidnamespacecontents
A0000045biological_processautophagosome assembly
A0000421cellular_componentautophagosome membrane
A0000423biological_processmitophagy
A0005515molecular_functionprotein binding
A0005543molecular_functionphospholipid binding
A0005739cellular_componentmitochondrion
A0005776cellular_componentautophagosome
A0005783cellular_componentendoplasmic reticulum
A0005794cellular_componentGolgi apparatus
A0005829cellular_componentcytosol
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0005886cellular_componentplasma membrane
A0005929cellular_componentcilium
A0006914biological_processautophagy
A0006995biological_processcellular response to nitrogen starvation
A0008429molecular_functionphosphatidylethanolamine binding
A0030659cellular_componentcytoplasmic vesicle membrane
A0030957molecular_functionTat protein binding
A0031410cellular_componentcytoplasmic vesicle
A0031625molecular_functionubiquitin protein ligase binding
A0036064cellular_componentciliary basal body
A0048487molecular_functionbeta-tubulin binding
A0050811molecular_functionGABA receptor binding
A0061723biological_processglycophagy
A0097352biological_processautophagosome maturation
C0000045biological_processautophagosome assembly
C0000421cellular_componentautophagosome membrane
C0000423biological_processmitophagy
C0005515molecular_functionprotein binding
C0005543molecular_functionphospholipid binding
C0005739cellular_componentmitochondrion
C0005776cellular_componentautophagosome
C0005783cellular_componentendoplasmic reticulum
C0005794cellular_componentGolgi apparatus
C0005829cellular_componentcytosol
C0005856cellular_componentcytoskeleton
C0005874cellular_componentmicrotubule
C0005886cellular_componentplasma membrane
C0005929cellular_componentcilium
C0006914biological_processautophagy
C0006995biological_processcellular response to nitrogen starvation
C0008429molecular_functionphosphatidylethanolamine binding
C0030659cellular_componentcytoplasmic vesicle membrane
C0030957molecular_functionTat protein binding
C0031410cellular_componentcytoplasmic vesicle
C0031625molecular_functionubiquitin protein ligase binding
C0036064cellular_componentciliary basal body
C0048487molecular_functionbeta-tubulin binding
C0050811molecular_functionGABA receptor binding
C0061723biological_processglycophagy
C0097352biological_processautophagosome maturation
E0000045biological_processautophagosome assembly
E0000421cellular_componentautophagosome membrane
E0000423biological_processmitophagy
E0005515molecular_functionprotein binding
E0005543molecular_functionphospholipid binding
E0005739cellular_componentmitochondrion
E0005776cellular_componentautophagosome
E0005783cellular_componentendoplasmic reticulum
E0005794cellular_componentGolgi apparatus
E0005829cellular_componentcytosol
E0005856cellular_componentcytoskeleton
E0005874cellular_componentmicrotubule
E0005886cellular_componentplasma membrane
E0005929cellular_componentcilium
E0006914biological_processautophagy
E0006995biological_processcellular response to nitrogen starvation
E0008429molecular_functionphosphatidylethanolamine binding
E0030659cellular_componentcytoplasmic vesicle membrane
E0030957molecular_functionTat protein binding
E0031410cellular_componentcytoplasmic vesicle
E0031625molecular_functionubiquitin protein ligase binding
E0036064cellular_componentciliary basal body
E0048487molecular_functionbeta-tubulin binding
E0050811molecular_functionGABA receptor binding
E0061723biological_processglycophagy
E0097352biological_processautophagosome maturation
G0000045biological_processautophagosome assembly
G0000421cellular_componentautophagosome membrane
G0000423biological_processmitophagy
G0005515molecular_functionprotein binding
G0005543molecular_functionphospholipid binding
G0005739cellular_componentmitochondrion
G0005776cellular_componentautophagosome
G0005783cellular_componentendoplasmic reticulum
G0005794cellular_componentGolgi apparatus
G0005829cellular_componentcytosol
G0005856cellular_componentcytoskeleton
G0005874cellular_componentmicrotubule
G0005886cellular_componentplasma membrane
G0005929cellular_componentcilium
G0006914biological_processautophagy
G0006995biological_processcellular response to nitrogen starvation
G0008429molecular_functionphosphatidylethanolamine binding
G0030659cellular_componentcytoplasmic vesicle membrane
G0030957molecular_functionTat protein binding
G0031410cellular_componentcytoplasmic vesicle
G0031625molecular_functionubiquitin protein ligase binding
G0036064cellular_componentciliary basal body
G0048487molecular_functionbeta-tubulin binding
G0050811molecular_functionGABA receptor binding
G0061723biological_processglycophagy
G0097352biological_processautophagosome maturation
I0000045biological_processautophagosome assembly
I0000421cellular_componentautophagosome membrane
I0000423biological_processmitophagy
I0005515molecular_functionprotein binding
I0005543molecular_functionphospholipid binding
I0005739cellular_componentmitochondrion
I0005776cellular_componentautophagosome
I0005783cellular_componentendoplasmic reticulum
I0005794cellular_componentGolgi apparatus
I0005829cellular_componentcytosol
I0005856cellular_componentcytoskeleton
I0005874cellular_componentmicrotubule
I0005886cellular_componentplasma membrane
I0005929cellular_componentcilium
I0006914biological_processautophagy
I0006995biological_processcellular response to nitrogen starvation
I0008429molecular_functionphosphatidylethanolamine binding
I0030659cellular_componentcytoplasmic vesicle membrane
I0030957molecular_functionTat protein binding
I0031410cellular_componentcytoplasmic vesicle
I0031625molecular_functionubiquitin protein ligase binding
I0036064cellular_componentciliary basal body
I0048487molecular_functionbeta-tubulin binding
I0050811molecular_functionGABA receptor binding
I0061723biological_processglycophagy
I0097352biological_processautophagosome maturation
K0000045biological_processautophagosome assembly
K0000421cellular_componentautophagosome membrane
K0000423biological_processmitophagy
K0005515molecular_functionprotein binding
K0005543molecular_functionphospholipid binding
K0005739cellular_componentmitochondrion
K0005776cellular_componentautophagosome
K0005783cellular_componentendoplasmic reticulum
K0005794cellular_componentGolgi apparatus
K0005829cellular_componentcytosol
K0005856cellular_componentcytoskeleton
K0005874cellular_componentmicrotubule
K0005886cellular_componentplasma membrane
K0005929cellular_componentcilium
K0006914biological_processautophagy
K0006995biological_processcellular response to nitrogen starvation
K0008429molecular_functionphosphatidylethanolamine binding
K0030659cellular_componentcytoplasmic vesicle membrane
K0030957molecular_functionTat protein binding
K0031410cellular_componentcytoplasmic vesicle
K0031625molecular_functionubiquitin protein ligase binding
K0036064cellular_componentciliary basal body
K0048487molecular_functionbeta-tubulin binding
K0050811molecular_functionGABA receptor binding
K0061723biological_processglycophagy
K0097352biological_processautophagosome maturation
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsPropeptide: {"description":"Removed in mature form","featureId":"PRO_0000420208","evidences":[{"source":"PubMed","id":"20404487","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsSite: {"description":"(Microbial infection) Cleavage; by RavZ","evidences":[{"source":"PubMed","id":"23112293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues5
DetailsSite: {"description":"Cleavage; by ATG4B","evidences":[{"source":"PubMed","id":"20404487","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues5
DetailsLipidation: {"description":"Phosphatidylserine amidated glycine; alternate","evidences":[{"source":"PubMed","id":"33909989","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

243531

PDB entries from 2025-10-22

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