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6ZD5

Crystal structure of YTHDC1 S378A mutant complex with m6A

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
B0003723molecular_functionRNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 A 601
ChainResidue
AARG451
AGLU452
AHOH711
AHOH738
AHOH759

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 602
ChainResidue
ASER419
AHIS420
AHIS421
AARG451

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 603
ChainResidue
ALYS385
AASN388
AARG392
ALYS457
AHOH716

site_idAC4
Number of Residues2
Detailsbinding site for residue SO4 A 604
ChainResidue
AHIS505
AHOH728

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 605
ChainResidue
AASN363
APRO431
AALA432
AHOH715

site_idAC6
Number of Residues12
Detailsbinding site for residue 6MD A 606
ChainResidue
ALYS361
ASER362
AASN363
AASN367
ATRP377
AALA378
ALEU380
AARG404
ATRP428
ALEU439
AASP476
AHOH718

site_idAC7
Number of Residues8
Detailsbinding site for residue SO4 B 601
ChainResidue
AGLY477
AGLU479
BGLY344
BTHR345
BSER346
BLYS347
BHOH733
BHOH765

site_idAC8
Number of Residues5
Detailsbinding site for residue SO4 B 602
ChainResidue
BLYS386
BGLN478
BGLU479
BHOH719
BHOH728

site_idAC9
Number of Residues12
Detailsbinding site for residue 6MD B 603
ChainResidue
BLYS361
BSER362
BASN363
BASN367
BTRP377
BALA378
BARG404
BTRP428
BMET434
BASP476
BHOH705
BHOH717

225946

PDB entries from 2024-10-09

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