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6Z2P

Crystal structure of catalytic inactive OgpA from Akkermansia muciniphila in complex with an O-glycopeptide (glycodrosocin) substrate

Functional Information from GO Data
ChainGOidnamespacecontents
A0046872molecular_functionmetal ion binding
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI4
Number of Residues1
DetailsSite: {"description":"Critical for inhibition of translation, possibly due to its role in mediating the interaction with bacterial 23S rRNA","evidences":[{"source":"PubMed","id":"36997647","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsSite: {"description":"Critical for inhibition of translation, possibly due to its role in mediating the interaction with bacterial 23S rRNA and rplV/50S ribosomal protein L22","evidences":[{"source":"PubMed","id":"36997646","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"36997647","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsGlycosylation: {"description":"O-linked (GalNAc...) serine","evidences":[{"source":"PubMed","id":"9736738","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsGlycosylation: {"description":"O-linked (GalNAc...) threonine","evidences":[{"source":"PubMed","id":"36997646","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8325867","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9736738","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9888811","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8AKN","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"8AM9","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"8ANA","evidenceCode":"ECO:0000312"}]}
ChainResidueDetails

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PDB entries from 2025-11-19

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