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6YLV

Translation initiation factor 4E in complex with 4-Cl-Bn7GpppG mRNA 5' cap analog

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
B0003723molecular_functionRNA binding
B0003743molecular_functiontranslation initiation factor activity
B0005737cellular_componentcytoplasm
B0006413biological_processtranslational initiation
C0003723molecular_functionRNA binding
C0003743molecular_functiontranslation initiation factor activity
C0005737cellular_componentcytoplasm
C0006413biological_processtranslational initiation
D0003723molecular_functionRNA binding
D0003743molecular_functiontranslation initiation factor activity
D0005737cellular_componentcytoplasm
D0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue OYW A 300
ChainResidue
ATRP56
ALYS162
ATRP166
AHOH447
AASP90
ASER92
APRO100
AMET101
ATRP102
AGLU103
AASN155
AARG157

site_idAC2
Number of Residues5
Detailsbinding site for residue GOL A 301
ChainResidue
ATHR116
AGLN121
ALEU189
AILE193
AHOH438

site_idAC3
Number of Residues14
Detailsbinding site for residue OYW B 300
ChainResidue
BTRP56
BASP90
BSER92
BPRO100
BMET101
BTRP102
BGLU103
BASN155
BARG157
BLYS162
BTRP166
BHOH407
BHOH439
BHOH445

site_idAC4
Number of Residues2
Detailsbinding site for residue GOL B 301
ChainResidue
BTHR116
BGLN121

site_idAC5
Number of Residues11
Detailsbinding site for residue OYW C 300
ChainResidue
CTRP56
CASP90
CSER92
CPRO100
CMET101
CTRP102
CGLU103
CASN155
CARG157
CLYS162
CHOH407

site_idAC6
Number of Residues11
Detailsbinding site for residue OYW D 300
ChainResidue
DTRP56
DASP90
DSER92
DPRO100
DMET101
DTRP102
DGLU103
DASN155
DARG157
DLYS162
DHOH425

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYslFKdgIePmWEDeknkrGGRW
ChainResidueDetails
AASP90-TRP113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues56
DetailsRegion: {"description":"EIF4EBP1/2/3 binding","evidences":[{"source":"PubMed","id":"10394359","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues28
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"10394359","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9200613","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine; by PKC and MKNK2","evidences":[{"source":"PubMed","id":"17689282","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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