6YBW
Structure of a human 48S translational initiation complex - 40S body
Functional Information from GO Data
Chain | GOid | namespace | contents |
9 | 0002181 | biological_process | cytoplasmic translation |
9 | 0003723 | molecular_function | RNA binding |
9 | 0003730 | molecular_function | mRNA 3'-UTR binding |
9 | 0003735 | molecular_function | structural constituent of ribosome |
9 | 0005515 | molecular_function | protein binding |
9 | 0005737 | cellular_component | cytoplasm |
9 | 0005783 | cellular_component | endoplasmic reticulum |
9 | 0005829 | cellular_component | cytosol |
9 | 0005840 | cellular_component | ribosome |
9 | 0006412 | biological_process | translation |
9 | 0022625 | cellular_component | cytosolic large ribosomal subunit |
9 | 0048027 | molecular_function | mRNA 5'-UTR binding |
9 | 1990904 | cellular_component | ribonucleoprotein complex |
B | 0002181 | biological_process | cytoplasmic translation |
B | 0003723 | molecular_function | RNA binding |
B | 0003735 | molecular_function | structural constituent of ribosome |
B | 0005515 | molecular_function | protein binding |
B | 0005654 | cellular_component | nucleoplasm |
B | 0005730 | cellular_component | nucleolus |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0005840 | cellular_component | ribosome |
B | 0005925 | cellular_component | focal adhesion |
B | 0006412 | biological_process | translation |
B | 0016020 | cellular_component | membrane |
B | 0019843 | molecular_function | rRNA binding |
B | 0022626 | cellular_component | cytosolic ribosome |
B | 0022627 | cellular_component | cytosolic small ribosomal subunit |
B | 0032040 | cellular_component | small-subunit processome |
B | 0042274 | biological_process | ribosomal small subunit biogenesis |
B | 0045202 | cellular_component | synapse |
B | 0070062 | cellular_component | extracellular exosome |
B | 1990904 | cellular_component | ribonucleoprotein complex |
C | 0002181 | biological_process | cytoplasmic translation |
C | 0003723 | molecular_function | RNA binding |
C | 0003735 | molecular_function | structural constituent of ribosome |
C | 0005515 | molecular_function | protein binding |
C | 0005654 | cellular_component | nucleoplasm |
C | 0005730 | cellular_component | nucleolus |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0005840 | cellular_component | ribosome |
C | 0005925 | cellular_component | focal adhesion |
C | 0006412 | biological_process | translation |
C | 0008284 | biological_process | positive regulation of cell population proliferation |
C | 0015935 | cellular_component | small ribosomal subunit |
C | 0016020 | cellular_component | membrane |
C | 0019843 | molecular_function | rRNA binding |
C | 0022626 | cellular_component | cytosolic ribosome |
C | 0022627 | cellular_component | cytosolic small ribosomal subunit |
C | 0032040 | cellular_component | small-subunit processome |
C | 0036464 | cellular_component | cytoplasmic ribonucleoprotein granule |
C | 0042274 | biological_process | ribosomal small subunit biogenesis |
C | 0045727 | biological_process | positive regulation of translation |
C | 0070062 | cellular_component | extracellular exosome |
C | 1990904 | cellular_component | ribonucleoprotein complex |
D | 0002181 | biological_process | cytoplasmic translation |
D | 0003723 | molecular_function | RNA binding |
D | 0003735 | molecular_function | structural constituent of ribosome |
D | 0005515 | molecular_function | protein binding |
D | 0005634 | cellular_component | nucleus |
D | 0005654 | cellular_component | nucleoplasm |
D | 0005730 | cellular_component | nucleolus |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0005840 | cellular_component | ribosome |
D | 0005925 | cellular_component | focal adhesion |
D | 0006412 | biological_process | translation |
D | 0015935 | cellular_component | small ribosomal subunit |
D | 0016020 | cellular_component | membrane |
D | 0019843 | molecular_function | rRNA binding |
D | 0022626 | cellular_component | cytosolic ribosome |
D | 0022627 | cellular_component | cytosolic small ribosomal subunit |
D | 0032040 | cellular_component | small-subunit processome |
D | 0042274 | biological_process | ribosomal small subunit biogenesis |
D | 0045202 | cellular_component | synapse |
D | 0070062 | cellular_component | extracellular exosome |
D | 1990904 | cellular_component | ribonucleoprotein complex |
E | 0002181 | biological_process | cytoplasmic translation |
E | 0003723 | molecular_function | RNA binding |
E | 0003735 | molecular_function | structural constituent of ribosome |
E | 0005515 | molecular_function | protein binding |
E | 0005654 | cellular_component | nucleoplasm |
E | 0005730 | cellular_component | nucleolus |
E | 0005737 | cellular_component | cytoplasm |
E | 0005783 | cellular_component | endoplasmic reticulum |
E | 0005791 | cellular_component | rough endoplasmic reticulum |
E | 0005829 | cellular_component | cytosol |
E | 0005840 | cellular_component | ribosome |
E | 0006412 | biological_process | translation |
E | 0015935 | cellular_component | small ribosomal subunit |
E | 0016020 | cellular_component | membrane |
E | 0022626 | cellular_component | cytosolic ribosome |
E | 0022627 | cellular_component | cytosolic small ribosomal subunit |
E | 0032040 | cellular_component | small-subunit processome |
E | 0034063 | biological_process | stress granule assembly |
E | 0042274 | biological_process | ribosomal small subunit biogenesis |
E | 0045202 | cellular_component | synapse |
E | 1990145 | biological_process | maintenance of translational fidelity |
E | 1990904 | cellular_component | ribonucleoprotein complex |
F | 0003735 | molecular_function | structural constituent of ribosome |
F | 0005840 | cellular_component | ribosome |
F | 0006412 | biological_process | translation |
G | 0001843 | biological_process | neural tube closure |
G | 0002181 | biological_process | cytoplasmic translation |
G | 0003723 | molecular_function | RNA binding |
G | 0003730 | molecular_function | mRNA 3'-UTR binding |
G | 0003735 | molecular_function | structural constituent of ribosome |
G | 0005515 | molecular_function | protein binding |
G | 0005634 | cellular_component | nucleus |
G | 0005654 | cellular_component | nucleoplasm |
G | 0005730 | cellular_component | nucleolus |
G | 0005737 | cellular_component | cytoplasm |
G | 0005783 | cellular_component | endoplasmic reticulum |
G | 0005813 | cellular_component | centrosome |
G | 0005829 | cellular_component | cytosol |
G | 0005840 | cellular_component | ribosome |
G | 0005925 | cellular_component | focal adhesion |
G | 0006364 | biological_process | rRNA processing |
G | 0006412 | biological_process | translation |
G | 0014033 | biological_process | neural crest cell differentiation |
G | 0016020 | cellular_component | membrane |
G | 0019901 | molecular_function | protein kinase binding |
G | 0022626 | cellular_component | cytosolic ribosome |
G | 0022627 | cellular_component | cytosolic small ribosomal subunit |
G | 0032040 | cellular_component | small-subunit processome |
G | 0032991 | cellular_component | protein-containing complex |
G | 0042274 | biological_process | ribosomal small subunit biogenesis |
G | 0045202 | cellular_component | synapse |
G | 0048027 | molecular_function | mRNA 5'-UTR binding |
G | 1902255 | biological_process | positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator |
G | 1990904 | cellular_component | ribonucleoprotein complex |
G | 1990948 | molecular_function | ubiquitin ligase inhibitor activity |
G | 2000059 | biological_process | negative regulation of ubiquitin-dependent protein catabolic process |
H | 0000028 | biological_process | ribosomal small subunit assembly |
H | 0002181 | biological_process | cytoplasmic translation |
H | 0003677 | molecular_function | DNA binding |
H | 0003723 | molecular_function | RNA binding |
H | 0003735 | molecular_function | structural constituent of ribosome |
H | 0005515 | molecular_function | protein binding |
H | 0005634 | cellular_component | nucleus |
H | 0005654 | cellular_component | nucleoplasm |
H | 0005730 | cellular_component | nucleolus |
H | 0005737 | cellular_component | cytoplasm |
H | 0005829 | cellular_component | cytosol |
H | 0005840 | cellular_component | ribosome |
H | 0006364 | biological_process | rRNA processing |
H | 0006412 | biological_process | translation |
H | 0008270 | molecular_function | zinc ion binding |
H | 0014069 | cellular_component | postsynaptic density |
H | 0022626 | cellular_component | cytosolic ribosome |
H | 0022627 | cellular_component | cytosolic small ribosomal subunit |
H | 0032040 | cellular_component | small-subunit processome |
H | 0042274 | biological_process | ribosomal small subunit biogenesis |
H | 0046872 | molecular_function | metal ion binding |
H | 0098793 | cellular_component | presynapse |
H | 0098978 | cellular_component | glutamatergic synapse |
H | 0098982 | cellular_component | GABA-ergic synapse |
H | 1990904 | cellular_component | ribonucleoprotein complex |
I | 0002181 | biological_process | cytoplasmic translation |
I | 0003723 | molecular_function | RNA binding |
I | 0003729 | molecular_function | mRNA binding |
I | 0003735 | molecular_function | structural constituent of ribosome |
I | 0005515 | molecular_function | protein binding |
I | 0005634 | cellular_component | nucleus |
I | 0005654 | cellular_component | nucleoplasm |
I | 0005730 | cellular_component | nucleolus |
I | 0005737 | cellular_component | cytoplasm |
I | 0005829 | cellular_component | cytosol |
I | 0005840 | cellular_component | ribosome |
I | 0005925 | cellular_component | focal adhesion |
I | 0006412 | biological_process | translation |
I | 0014069 | cellular_component | postsynaptic density |
I | 0016020 | cellular_component | membrane |
I | 0022626 | cellular_component | cytosolic ribosome |
I | 0022627 | cellular_component | cytosolic small ribosomal subunit |
I | 0032040 | cellular_component | small-subunit processome |
I | 0033119 | biological_process | negative regulation of RNA splicing |
I | 0042274 | biological_process | ribosomal small subunit biogenesis |
I | 0048027 | molecular_function | mRNA 5'-UTR binding |
I | 0070062 | cellular_component | extracellular exosome |
I | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
I | 1990904 | cellular_component | ribonucleoprotein complex |
J | 0002181 | biological_process | cytoplasmic translation |
J | 0003723 | molecular_function | RNA binding |
J | 0003735 | molecular_function | structural constituent of ribosome |
J | 0005515 | molecular_function | protein binding |
J | 0005654 | cellular_component | nucleoplasm |
J | 0005730 | cellular_component | nucleolus |
J | 0005737 | cellular_component | cytoplasm |
J | 0005829 | cellular_component | cytosol |
J | 0005840 | cellular_component | ribosome |
J | 0006412 | biological_process | translation |
J | 0008284 | biological_process | positive regulation of cell population proliferation |
J | 0009615 | biological_process | response to virus |
J | 0016020 | cellular_component | membrane |
J | 0022626 | cellular_component | cytosolic ribosome |
J | 0022627 | cellular_component | cytosolic small ribosomal subunit |
J | 0032040 | cellular_component | small-subunit processome |
J | 0042274 | biological_process | ribosomal small subunit biogenesis |
J | 0045787 | biological_process | positive regulation of cell cycle |
J | 0070062 | cellular_component | extracellular exosome |
J | 1990904 | cellular_component | ribonucleoprotein complex |
K | 0000447 | biological_process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
K | 0000461 | biological_process | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
K | 0002181 | biological_process | cytoplasmic translation |
K | 0003723 | molecular_function | RNA binding |
K | 0003735 | molecular_function | structural constituent of ribosome |
K | 0005515 | molecular_function | protein binding |
K | 0005654 | cellular_component | nucleoplasm |
K | 0005737 | cellular_component | cytoplasm |
K | 0005783 | cellular_component | endoplasmic reticulum |
K | 0005791 | cellular_component | rough endoplasmic reticulum |
K | 0005829 | cellular_component | cytosol |
K | 0005840 | cellular_component | ribosome |
K | 0006412 | biological_process | translation |
K | 0015935 | cellular_component | small ribosomal subunit |
K | 0022626 | cellular_component | cytosolic ribosome |
K | 0022627 | cellular_component | cytosolic small ribosomal subunit |
K | 0045202 | cellular_component | synapse |
K | 1990904 | cellular_component | ribonucleoprotein complex |
L | 0002181 | biological_process | cytoplasmic translation |
L | 0003723 | molecular_function | RNA binding |
L | 0003729 | molecular_function | mRNA binding |
L | 0003735 | molecular_function | structural constituent of ribosome |
L | 0005515 | molecular_function | protein binding |
L | 0005634 | cellular_component | nucleus |
L | 0005654 | cellular_component | nucleoplasm |
L | 0005730 | cellular_component | nucleolus |
L | 0005737 | cellular_component | cytoplasm |
L | 0005829 | cellular_component | cytosol |
L | 0005840 | cellular_component | ribosome |
L | 0005925 | cellular_component | focal adhesion |
L | 0006412 | biological_process | translation |
L | 0015935 | cellular_component | small ribosomal subunit |
L | 0016020 | cellular_component | membrane |
L | 0017134 | molecular_function | fibroblast growth factor binding |
L | 0019899 | molecular_function | enzyme binding |
L | 0022626 | cellular_component | cytosolic ribosome |
L | 0022627 | cellular_component | cytosolic small ribosomal subunit |
L | 0045296 | molecular_function | cadherin binding |
L | 0051443 | biological_process | positive regulation of ubiquitin-protein transferase activity |
L | 0070062 | cellular_component | extracellular exosome |
L | 1990904 | cellular_component | ribonucleoprotein complex |
M | 0002181 | biological_process | cytoplasmic translation |
M | 0003723 | molecular_function | RNA binding |
M | 0003735 | molecular_function | structural constituent of ribosome |
M | 0005654 | cellular_component | nucleoplasm |
M | 0005730 | cellular_component | nucleolus |
M | 0005737 | cellular_component | cytoplasm |
M | 0005829 | cellular_component | cytosol |
M | 0005840 | cellular_component | ribosome |
M | 0005925 | cellular_component | focal adhesion |
M | 0006364 | biological_process | rRNA processing |
M | 0006412 | biological_process | translation |
M | 0006413 | biological_process | translational initiation |
M | 0016020 | cellular_component | membrane |
M | 0022626 | cellular_component | cytosolic ribosome |
M | 0022627 | cellular_component | cytosolic small ribosomal subunit |
M | 0032040 | cellular_component | small-subunit processome |
M | 0034101 | biological_process | erythrocyte homeostasis |
M | 0042274 | biological_process | ribosomal small subunit biogenesis |
M | 1990904 | cellular_component | ribonucleoprotein complex |
N | 0000028 | biological_process | ribosomal small subunit assembly |
N | 0001618 | molecular_function | virus receptor activity |
N | 0002181 | biological_process | cytoplasmic translation |
N | 0003677 | molecular_function | DNA binding |
N | 0003723 | molecular_function | RNA binding |
N | 0003735 | molecular_function | structural constituent of ribosome |
N | 0005055 | molecular_function | laminin receptor activity |
N | 0005515 | molecular_function | protein binding |
N | 0005634 | cellular_component | nucleus |
N | 0005654 | cellular_component | nucleoplasm |
N | 0005737 | cellular_component | cytoplasm |
N | 0005829 | cellular_component | cytosol |
N | 0005840 | cellular_component | ribosome |
N | 0005886 | cellular_component | plasma membrane |
N | 0006412 | biological_process | translation |
N | 0007155 | biological_process | cell adhesion |
N | 0015935 | cellular_component | small ribosomal subunit |
N | 0016020 | cellular_component | membrane |
N | 0022626 | cellular_component | cytosolic ribosome |
N | 0022627 | cellular_component | cytosolic small ribosomal subunit |
N | 0043022 | molecular_function | ribosome binding |
N | 0043236 | molecular_function | laminin binding |
N | 0046718 | biological_process | symbiont entry into host cell |
N | 0070062 | cellular_component | extracellular exosome |
N | 0140374 | biological_process | antiviral innate immune response |
N | 1990904 | cellular_component | ribonucleoprotein complex |
O | 0002181 | biological_process | cytoplasmic translation |
O | 0003723 | molecular_function | RNA binding |
O | 0003735 | molecular_function | structural constituent of ribosome |
O | 0005515 | molecular_function | protein binding |
O | 0005634 | cellular_component | nucleus |
O | 0005654 | cellular_component | nucleoplasm |
O | 0005730 | cellular_component | nucleolus |
O | 0005737 | cellular_component | cytoplasm |
O | 0005783 | cellular_component | endoplasmic reticulum |
O | 0005829 | cellular_component | cytosol |
O | 0005840 | cellular_component | ribosome |
O | 0005925 | cellular_component | focal adhesion |
O | 0006412 | biological_process | translation |
O | 0006413 | biological_process | translational initiation |
O | 0022626 | cellular_component | cytosolic ribosome |
O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
O | 0030154 | biological_process | cell differentiation |
O | 0032040 | cellular_component | small-subunit processome |
O | 0042274 | biological_process | ribosomal small subunit biogenesis |
O | 0043066 | biological_process | negative regulation of apoptotic process |
O | 0045202 | cellular_component | synapse |
O | 0048027 | molecular_function | mRNA 5'-UTR binding |
O | 0070062 | cellular_component | extracellular exosome |
O | 1990904 | cellular_component | ribonucleoprotein complex |
P | 0000028 | biological_process | ribosomal small subunit assembly |
P | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
P | 0002181 | biological_process | cytoplasmic translation |
P | 0003723 | molecular_function | RNA binding |
P | 0003735 | molecular_function | structural constituent of ribosome |
P | 0005515 | molecular_function | protein binding |
P | 0005654 | cellular_component | nucleoplasm |
P | 0005730 | cellular_component | nucleolus |
P | 0005737 | cellular_component | cytoplasm |
P | 0005829 | cellular_component | cytosol |
P | 0005840 | cellular_component | ribosome |
P | 0005925 | cellular_component | focal adhesion |
P | 0006412 | biological_process | translation |
P | 0014069 | cellular_component | postsynaptic density |
P | 0016020 | cellular_component | membrane |
P | 0022626 | cellular_component | cytosolic ribosome |
P | 0022627 | cellular_component | cytosolic small ribosomal subunit |
P | 0030218 | biological_process | erythrocyte differentiation |
P | 0030490 | biological_process | maturation of SSU-rRNA |
P | 0032040 | cellular_component | small-subunit processome |
P | 0042274 | biological_process | ribosomal small subunit biogenesis |
P | 0045202 | cellular_component | synapse |
P | 0048027 | molecular_function | mRNA 5'-UTR binding |
P | 0070062 | cellular_component | extracellular exosome |
P | 1990904 | cellular_component | ribonucleoprotein complex |
Q | 0002181 | biological_process | cytoplasmic translation |
Q | 0003723 | molecular_function | RNA binding |
Q | 0003729 | molecular_function | mRNA binding |
Q | 0003735 | molecular_function | structural constituent of ribosome |
Q | 0005515 | molecular_function | protein binding |
Q | 0005654 | cellular_component | nucleoplasm |
Q | 0005737 | cellular_component | cytoplasm |
Q | 0005791 | cellular_component | rough endoplasmic reticulum |
Q | 0005829 | cellular_component | cytosol |
Q | 0005840 | cellular_component | ribosome |
Q | 0006412 | biological_process | translation |
Q | 0015935 | cellular_component | small ribosomal subunit |
Q | 0016020 | cellular_component | membrane |
Q | 0022626 | cellular_component | cytosolic ribosome |
Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
Q | 0033119 | biological_process | negative regulation of RNA splicing |
Q | 0045202 | cellular_component | synapse |
Q | 0045296 | molecular_function | cadherin binding |
Q | 0070062 | cellular_component | extracellular exosome |
Q | 0098556 | cellular_component | cytoplasmic side of rough endoplasmic reticulum membrane |
Q | 1990904 | cellular_component | ribonucleoprotein complex |
R | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
R | 0002181 | biological_process | cytoplasmic translation |
R | 0003723 | molecular_function | RNA binding |
R | 0003735 | molecular_function | structural constituent of ribosome |
R | 0005515 | molecular_function | protein binding |
R | 0005634 | cellular_component | nucleus |
R | 0005654 | cellular_component | nucleoplasm |
R | 0005730 | cellular_component | nucleolus |
R | 0005737 | cellular_component | cytoplasm |
R | 0005783 | cellular_component | endoplasmic reticulum |
R | 0005829 | cellular_component | cytosol |
R | 0005840 | cellular_component | ribosome |
R | 0005925 | cellular_component | focal adhesion |
R | 0006412 | biological_process | translation |
R | 0016020 | cellular_component | membrane |
R | 0022626 | cellular_component | cytosolic ribosome |
R | 0022627 | cellular_component | cytosolic small ribosomal subunit |
R | 0032040 | cellular_component | small-subunit processome |
R | 0042274 | biological_process | ribosomal small subunit biogenesis |
R | 0070062 | cellular_component | extracellular exosome |
R | 1990904 | cellular_component | ribonucleoprotein complex |
S | 0000028 | biological_process | ribosomal small subunit assembly |
S | 0002181 | biological_process | cytoplasmic translation |
S | 0003723 | molecular_function | RNA binding |
S | 0003729 | molecular_function | mRNA binding |
S | 0003735 | molecular_function | structural constituent of ribosome |
S | 0005515 | molecular_function | protein binding |
S | 0005634 | cellular_component | nucleus |
S | 0005654 | cellular_component | nucleoplasm |
S | 0005730 | cellular_component | nucleolus |
S | 0005737 | cellular_component | cytoplasm |
S | 0005783 | cellular_component | endoplasmic reticulum |
S | 0005829 | cellular_component | cytosol |
S | 0005840 | cellular_component | ribosome |
S | 0006364 | biological_process | rRNA processing |
S | 0006412 | biological_process | translation |
S | 0008284 | biological_process | positive regulation of cell population proliferation |
S | 0015935 | cellular_component | small ribosomal subunit |
S | 0016020 | cellular_component | membrane |
S | 0019901 | molecular_function | protein kinase binding |
S | 0022626 | cellular_component | cytosolic ribosome |
S | 0022627 | cellular_component | cytosolic small ribosomal subunit |
S | 0030425 | cellular_component | dendrite |
S | 0031929 | biological_process | TOR signaling |
S | 0032040 | cellular_component | small-subunit processome |
S | 0032868 | biological_process | response to insulin |
S | 0036464 | cellular_component | cytoplasmic ribonucleoprotein granule |
S | 0042274 | biological_process | ribosomal small subunit biogenesis |
S | 0042593 | biological_process | glucose homeostasis |
S | 0043065 | biological_process | positive regulation of apoptotic process |
S | 0044297 | cellular_component | cell body |
S | 0071361 | biological_process | cellular response to ethanol |
S | 0098793 | cellular_component | presynapse |
S | 0098982 | cellular_component | GABA-ergic synapse |
S | 1903347 | biological_process | negative regulation of bicellular tight junction assembly |
S | 1990904 | cellular_component | ribonucleoprotein complex |
T | 0002181 | biological_process | cytoplasmic translation |
T | 0003723 | molecular_function | RNA binding |
T | 0003735 | molecular_function | structural constituent of ribosome |
T | 0005634 | cellular_component | nucleus |
T | 0005654 | cellular_component | nucleoplasm |
T | 0005730 | cellular_component | nucleolus |
T | 0005737 | cellular_component | cytoplasm |
T | 0005783 | cellular_component | endoplasmic reticulum |
T | 0005829 | cellular_component | cytosol |
T | 0005840 | cellular_component | ribosome |
T | 0006364 | biological_process | rRNA processing |
T | 0006412 | biological_process | translation |
T | 0015935 | cellular_component | small ribosomal subunit |
T | 0016020 | cellular_component | membrane |
T | 0022626 | cellular_component | cytosolic ribosome |
T | 0022627 | cellular_component | cytosolic small ribosomal subunit |
T | 0031369 | molecular_function | translation initiation factor binding |
T | 0032040 | cellular_component | small-subunit processome |
T | 0034101 | biological_process | erythrocyte homeostasis |
T | 0042274 | biological_process | ribosomal small subunit biogenesis |
T | 1990904 | cellular_component | ribonucleoprotein complex |
p | 0003723 | molecular_function | RNA binding |
p | 0003743 | molecular_function | translation initiation factor activity |
p | 0005515 | molecular_function | protein binding |
p | 0005634 | cellular_component | nucleus |
p | 0005737 | cellular_component | cytoplasm |
p | 0006412 | biological_process | translation |
p | 0006413 | biological_process | translational initiation |
p | 0006446 | biological_process | regulation of translational initiation |
p | 0008135 | molecular_function | translation factor activity, RNA binding |
p | 0010468 | biological_process | regulation of gene expression |
p | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
p | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
p | 0043024 | molecular_function | ribosomal small subunit binding |
p | 0043614 | cellular_component | multi-eIF complex |
p | 0080090 | biological_process | regulation of primary metabolic process |
q | 0000049 | molecular_function | tRNA binding |
q | 0003723 | molecular_function | RNA binding |
q | 0003743 | molecular_function | translation initiation factor activity |
q | 0005515 | molecular_function | protein binding |
q | 0005737 | cellular_component | cytoplasm |
q | 0005829 | cellular_component | cytosol |
q | 0006412 | biological_process | translation |
q | 0006413 | biological_process | translational initiation |
q | 0008135 | molecular_function | translation factor activity, RNA binding |
q | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
q | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
q | 0042255 | biological_process | ribosome assembly |
q | 0043614 | cellular_component | multi-eIF complex |
q | 0045202 | cellular_component | synapse |
y | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
y | 0002183 | biological_process | cytoplasmic translational initiation |
y | 0003723 | molecular_function | RNA binding |
y | 0003743 | molecular_function | translation initiation factor activity |
y | 0005515 | molecular_function | protein binding |
y | 0005737 | cellular_component | cytoplasm |
y | 0005829 | cellular_component | cytosol |
y | 0005852 | cellular_component | eukaryotic translation initiation factor 3 complex |
y | 0006412 | biological_process | translation |
y | 0006413 | biological_process | translational initiation |
y | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
y | 0031369 | molecular_function | translation initiation factor binding |
y | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
y | 0043022 | molecular_function | ribosome binding |
y | 0045727 | biological_process | positive regulation of translation |
z | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
z | 0002183 | biological_process | cytoplasmic translational initiation |
z | 0003743 | molecular_function | translation initiation factor activity |
z | 0005515 | molecular_function | protein binding |
z | 0005737 | cellular_component | cytoplasm |
z | 0005829 | cellular_component | cytosol |
z | 0005852 | cellular_component | eukaryotic translation initiation factor 3 complex |
z | 0006412 | biological_process | translation |
z | 0006413 | biological_process | translational initiation |
z | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
z | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
z | 0042802 | molecular_function | identical protein binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN Q 201 |
Chain | Residue |
Q | CYS23 |
Q | CYS26 |
Q | CYS74 |
Q | CYS77 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue MG S 301 |
Chain | Residue |
A | U314 |
A | C315 |
S | GLN177 |
site_id | AC3 |
Number of Residues | 1 |
Details | binding site for residue MG A 1903 |
Chain | Residue |
A | G999 |
site_id | AC4 |
Number of Residues | 1 |
Details | binding site for residue MG A 1904 |
Chain | Residue |
A | A449 |
site_id | AC5 |
Number of Residues | 2 |
Details | binding site for residue MG A 1905 |
Chain | Residue |
A | G434 |
A | C450 |
site_id | AC6 |
Number of Residues | 1 |
Details | binding site for residue MG A 1906 |
Chain | Residue |
A | G16 |
site_id | AC7 |
Number of Residues | 1 |
Details | binding site for residue MG A 1907 |
Chain | Residue |
A | G94 |
site_id | AC8 |
Number of Residues | 2 |
Details | binding site for residue MG A 1908 |
Chain | Residue |
A | A654 |
A | G656 |
site_id | AC9 |
Number of Residues | 2 |
Details | binding site for residue MG A 1909 |
Chain | Residue |
A | G94 |
A | G451 |
site_id | AD1 |
Number of Residues | 1 |
Details | binding site for residue MG A 1910 |
Chain | Residue |
A | C48 |
site_id | AD2 |
Number of Residues | 1 |
Details | binding site for residue MG A 1911 |
Chain | Residue |
A | C472 |
site_id | AD3 |
Number of Residues | 2 |
Details | binding site for residue MG A 1912 |
Chain | Residue |
A | C663 |
A | C1153 |
site_id | AD4 |
Number of Residues | 4 |
Details | binding site for residue MG A 1913 |
Chain | Residue |
A | 6MZ1832 |
A | G1837 |
A | U1839 |
A | U1840 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue MG A 1914 |
Chain | Residue |
A | A1831 |
A | 6MZ1832 |
A | U1840 |
A | C1853 |
site_id | AD6 |
Number of Residues | 4 |
Details | binding site for residue MG A 1915 |
Chain | Residue |
A | UR31830 |
A | A1831 |
A | 6MZ1832 |
A | G1837 |
site_id | AD7 |
Number of Residues | 2 |
Details | binding site for residue MG A 1916 |
Chain | Residue |
A | A426 |
A | U427 |
site_id | AD8 |
Number of Residues | 2 |
Details | binding site for residue MG A 1917 |
Chain | Residue |
A | A679 |
A | G680 |
site_id | AD9 |
Number of Residues | 1 |
Details | binding site for residue MG A 1919 |
Chain | Residue |
A | U1025 |
site_id | AE1 |
Number of Residues | 2 |
Details | binding site for residue MG A 1920 |
Chain | Residue |
A | C676 |
A | C1026 |
site_id | AE2 |
Number of Residues | 3 |
Details | binding site for residue MG A 1921 |
Chain | Residue |
A | G601 |
A | A604 |
A | A605 |
site_id | AE3 |
Number of Residues | 4 |
Details | binding site for residue MG A 1922 |
Chain | Residue |
A | U1101 |
A | G1102 |
A | G1130 |
A | G1131 |
site_id | AE4 |
Number of Residues | 2 |
Details | binding site for residue MG A 1924 |
Chain | Residue |
A | A508 |
A | OMG509 |
site_id | AE5 |
Number of Residues | 2 |
Details | binding site for residue MG A 1925 |
Chain | Residue |
A | G1166 |
A | G1167 |
site_id | AE6 |
Number of Residues | 1 |
Details | binding site for residue MG A 1926 |
Chain | Residue |
A | A2M27 |
site_id | AE7 |
Number of Residues | 1 |
Details | binding site for residue MG A 1928 |
Chain | Residue |
A | A653 |
site_id | AE8 |
Number of Residues | 1 |
Details | binding site for residue MG A 1929 |
Chain | Residue |
A | A672 |
site_id | AE9 |
Number of Residues | 1 |
Details | binding site for residue MG A 1932 |
Chain | Residue |
A | A1028 |
site_id | AF1 |
Number of Residues | 1 |
Details | binding site for residue MG A 1933 |
Chain | Residue |
A | U1 |
site_id | AF2 |
Number of Residues | 2 |
Details | binding site for residue MG A 1934 |
Chain | Residue |
A | A1036 |
A | U1072 |
site_id | AF3 |
Number of Residues | 1 |
Details | binding site for residue MG A 1935 |
Chain | Residue |
A | U1839 |
site_id | AF4 |
Number of Residues | 4 |
Details | binding site for residue MG A 1936 |
Chain | Residue |
A | G90 |
A | A91 |
A | A92 |
A | G446 |
site_id | AF5 |
Number of Residues | 2 |
Details | binding site for residue MG A 1937 |
Chain | Residue |
A | G385 |
A | A389 |
site_id | AF6 |
Number of Residues | 2 |
Details | binding site for residue MG A 1938 |
Chain | Residue |
A | A920 |
A | G923 |
site_id | AF7 |
Number of Residues | 2 |
Details | binding site for residue MG A 1940 |
Chain | Residue |
A | A672 |
A | C674 |
site_id | AF8 |
Number of Residues | 1 |
Details | binding site for residue MG A 1941 |
Chain | Residue |
A | A1082 |
site_id | AF9 |
Number of Residues | 3 |
Details | binding site for residue MG A 1942 |
Chain | Residue |
A | A2M668 |
A | A669 |
A | A670 |
site_id | AG1 |
Number of Residues | 1 |
Details | binding site for residue MG A 1943 |
Chain | Residue |
A | A2M668 |
site_id | AG2 |
Number of Residues | 1 |
Details | binding site for residue MG A 1944 |
Chain | Residue |
A | G1862 |
site_id | AG3 |
Number of Residues | 2 |
Details | binding site for residue MG A 1945 |
Chain | Residue |
A | G7 |
A | G16 |
site_id | AG4 |
Number of Residues | 2 |
Details | binding site for residue MG A 1947 |
Chain | Residue |
A | U59 |
A | G62 |
site_id | AG5 |
Number of Residues | 3 |
Details | binding site for residue MG A 1949 |
Chain | Residue |
A | A99 |
A | U100 |
A | C409 |
site_id | AG6 |
Number of Residues | 2 |
Details | binding site for residue MG A 1950 |
Chain | Residue |
A | A173 |
A | OMC174 |
site_id | AG7 |
Number of Residues | 1 |
Details | binding site for residue MG A 1952 |
Chain | Residue |
A | G477 |
site_id | AG8 |
Number of Residues | 4 |
Details | binding site for residue MG A 1953 |
Chain | Residue |
A | C492 |
A | U495 |
A | C496 |
A | G506 |
site_id | AG9 |
Number of Residues | 1 |
Details | binding site for residue MG A 1954 |
Chain | Residue |
A | A564 |
site_id | AH1 |
Number of Residues | 2 |
Details | binding site for residue MG A 1955 |
Chain | Residue |
A | C593 |
A | A594 |
site_id | AH2 |
Number of Residues | 3 |
Details | binding site for residue MG A 1956 |
Chain | Residue |
A | G684 |
A | A685 |
A | A864 |
site_id | AH3 |
Number of Residues | 2 |
Details | binding site for residue MG A 1957 |
Chain | Residue |
A | G985 |
A | G986 |
site_id | AH4 |
Number of Residues | 3 |
Details | binding site for residue MG A 1958 |
Chain | Residue |
A | U1186 |
A | U1174 |
A | G1175 |
site_id | AH5 |
Number of Residues | 10 |
Details | binding site for residues PSU A 822 and PSU A 823 |
Chain | Residue |
A | G821 |
A | C824 |
A | A825 |
A | A826 |
A | A827 |
D | GLN140 |
D | VAL141 |
D | VAL142 |
D | ASN143 |
T | PHE64 |
site_id | AH6 |
Number of Residues | 13 |
Details | binding site for residues MA6 A 1850 and MA6 A 1851 |
Chain | Residue |
9 | MET1 |
9 | ARG9 |
A | C1705 |
A | G1706 |
A | U1707 |
A | G1829 |
A | UR31830 |
A | A1831 |
A | U1848 |
A | G1849 |
A | C1852 |
p | LYS65 |
p | ASN70 |
Functional Information from PROSITE/UniProt
site_id | PS00053 |
Number of Residues | 18 |
Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR |
Chain | Residue | Details |
J | GLY100-ARG117 |
site_id | PS00054 |
Number of Residues | 23 |
Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD |
Chain | Residue | Details |
P | LEU116-ASP138 |
site_id | PS00055 |
Number of Residues | 8 |
Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR |
Chain | Residue | Details |
E | LYS60-ARG67 |
site_id | PS00056 |
Number of Residues | 13 |
Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS |
Chain | Residue | Details |
B | GLY123-SER135 |
site_id | PS00362 |
Number of Residues | 31 |
Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY |
Chain | Residue | Details |
I | VAL98-TYR128 |
site_id | PS00528 |
Number of Residues | 15 |
Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK |
Chain | Residue | Details |
C | HIS8-LYS22 |
site_id | PS00529 |
Number of Residues | 23 |
Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE |
Chain | Residue | Details |
T | PHE64-GLU86 |
site_id | PS00578 |
Number of Residues | 12 |
Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM |
Chain | Residue | Details |
S | ILE52-MET63 |
site_id | PS00585 |
Number of Residues | 33 |
Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvAIGDyn.GhVGlGvkcsk.EVat.AI |
Chain | Residue | Details |
L | GLY119-ILE151 |
site_id | PS00632 |
Number of Residues | 25 |
Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI |
Chain | Residue | Details |
D | LEU106-ILE130 |
site_id | PS00712 |
Number of Residues | 16 |
Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH |
Chain | Residue | Details |
M | ILE41-HIS56 |
site_id | PS00733 |
Number of Residues | 8 |
Details | RIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH |
Chain | Residue | Details |
Q | TYR73-HIS80 |
site_id | PS00948 |
Number of Residues | 14 |
Details | RIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH |
Chain | Residue | Details |
G | ARG78-HIS91 |
site_id | PS00962 |
Number of Residues | 12 |
Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VlKFLAAGTHLG |
Chain | Residue | Details |
N | VAL15-GLY26 |
site_id | PS00963 |
Number of Residues | 25 |
Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLVVtDpraDhqpLtEasyvNLP |
Chain | Residue | Details |
N | PRO119-PRO143 |
site_id | PS00996 |
Number of Residues | 9 |
Details | RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA |
Chain | Residue | Details |
K | LEU11-ALA19 |
site_id | PS01168 |
Number of Residues | 33 |
Details | RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG |
Chain | Residue | Details |
H | LYS36-GLY68 |
site_id | PS01191 |
Number of Residues | 13 |
Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL |
Chain | Residue | Details |
O | LEU62-LEU74 |
site_id | PS01193 |
Number of Residues | 20 |
Details | RIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG |
Chain | Residue | Details |
R | ARG11-GLY30 |
site_id | PS01262 |
Number of Residues | 23 |
Details | IF1A Eukaryotic initiation factor 1A signature. MlGnGRleamCfDGvkRlcHIrG |
Chain | Residue | Details |
q | MET41-GLY63 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 62 |
Details | Domain: {"description":"S4 RNA-binding"} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62702","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 21 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 8 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 10 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | Lipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"PubMed","id":"21044946","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62267","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 1 |
Details | Modified residue: {"description":"3-hydroxyproline","evidences":[{"source":"PubMed","id":"24550447","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24550462","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28257692","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q6ZWN5","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 3 |
Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 6 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 46 |
Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 58 |
Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 22 |
Details | Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34516797","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7MQ8","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylmethionine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAY-2006","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V.","Kanor S.","Tissot J.-D.","Quadroni M."]}},{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"25944712","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI20 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"25114211","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI21 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62245","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI22 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI23 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI24 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"36638793","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI25 |
Number of Residues | 63 |
Details | Domain: {"description":"S5 DRBM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00268","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI26 |
Number of Residues | 3 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI27 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI28 |
Number of Residues | 1 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"28132843","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32011234","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"34469731","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI29 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"28132843","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI30 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P97351","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI31 |
Number of Residues | 1 |
Details | Modified residue: {"description":"ADP-ribosyltyrosine","evidences":[{"source":"PubMed","id":"29954836","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI32 |
Number of Residues | 59 |
Details | Region: {"description":"Interaction with PPP1R16B","evidences":[{"source":"PubMed","id":"16263087","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI33 |
Number of Residues | 19 |
Details | Region: {"description":"Laminin-binding"} |
Chain | Residue | Details |
site_id | SWS_FT_FI34 |
Number of Residues | 1 |
Details | Site: {"description":"Cleavage; by ST3; site 1","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI35 |
Number of Residues | 1 |
Details | Site: {"description":"Cleavage; by ST3; site 2","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI36 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"JUL-2004","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V.","Potts A.","Barblan J.","Quadroni M."]}},{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"25944712","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI37 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P14206","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI38 |
Number of Residues | 22 |
Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI39 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18691976","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI40 |
Number of Residues | 1 |
Details | Modified residue: {"description":"ADP-ribosyl glutamic acid","evidences":[{"source":"PubMed","id":"34314702","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI41 |
Number of Residues | 1 |
Details | Modified residue: {"description":"(3R)-3-hydroxyarginine","evidences":[{"source":"PubMed","id":"29563586","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI42 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62242","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI43 |
Number of Residues | 1 |
Details | Lipidation: {"description":"N-myristoyl glycine","evidences":[{"source":"PubMed","id":"25255805","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI44 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI45 |
Number of Residues | 74 |
Details | Domain: {"description":"S1-like"} |
Chain | Residue | Details |
site_id | SWS_FT_FI46 |
Number of Residues | 2 |
Details | Site: {"description":"Binds 40S ribosomal subunit","evidences":[{"source":"PubMed","id":"29987188","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI47 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62301","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI48 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62301","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI49 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"15592455","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI50 |
Number of Residues | 1 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"36638793","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI51 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI52 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q8R1B4","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |