6Y54

Crystal structure of a Neisseria meningitidis serogroup A capsular oligosaccharide bound to a functional Fab

Functional Information from PDB Data

site_id	AC1
Number of Residues	1
Details	binding site for residue IOD H 301

Chain	Residue
H	TRP155

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site_id	AC2
Number of Residues	1
Details	binding site for residue IOD H 302

Chain	Residue
H	TYR103

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site_id	AC3
Number of Residues	3
Details	binding site for residue EDO H 303

Chain	Residue
H	PRO14
H	THR87
H	SER88

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site_id	AC4
Number of Residues	4
Details	binding site for residue EDO H 304

Chain	Residue
H	GLY8
H	SER9
H	PRO150
M	GLN1

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site_id	AC5
Number of Residues	1
Details	binding site for residue IOD M 301

Chain	Residue
M	TRP155

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site_id	AC6
Number of Residues	1
Details	binding site for residue IOD M 303

Chain	Residue
M	TYR103

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site_id	AC7
Number of Residues	2
Details	binding site for residue EDO M 305

Chain	Residue
M	PRO14
M	SER88

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site_id	AC8
Number of Residues	18
Details	binding site for residues OOW H 305 and OA8 L 303

Chain	Residue
H	PRO14
H	TRP33
H	HIS35
H	ASN50
H	ASN59
H	THR87
H	SER88
H	ARG100
L	TYR31
L	TYR37
L	HIS39
L	TYR54
L	LYS55
L	ASN96
L	THR97
L	TYR101
L	OAB304
P	SER28

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site_id	AC9
Number of Residues	11
Details	binding site for residues OA8 L 303 and OAB L 304

Chain	Residue
H	ARG100
H	MET101
H	OOW305
L	TYR31
L	TYR37
L	HIS39
L	TYR54
L	LYS55
L	ASN58
L	ASN96
L	TYR101

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site_id	AD1
Number of Residues	16
Details	binding site for residues OOW M 306 and OA8 N 302

Chain	Residue
M	TRP33
M	HIS35
M	ASN50
M	ASN59
M	VAL99
M	ARG100
M	HOH402
N	TYR31
N	TYR37
N	HIS39
N	TYR54
N	LYS55
N	ASN96
N	THR97
N	TYR101
N	OAB303

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site_id	AD2
Number of Residues	9
Details	binding site for residues OA8 N 302 and OAB N 303

Chain	Residue
M	VAL99
M	ARG100
M	OOW306
N	TYR37
N	HIS39
N	TYR54
N	LYS55
N	ASN96
N	TYR101

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site_id	AD3
Number of Residues	15
Details	binding site for residues OOW O 301 and OA8 P 301

Chain	Residue
O	TRP33
O	HIS35
O	ASN50
O	ASN59
O	ARG100
O	HOH401
P	TYR31
P	TYR37
P	HIS39
P	LYS55
P	ASN96
P	THR97
P	ILE99
P	TYR101
P	OAB302

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site_id	AD4
Number of Residues	9
Details	binding site for residues OA8 P 301 and OAB P 302

Chain	Residue
O	ARG100
O	OOW301
P	TYR31
P	TYR37
P	HIS39
P	TYR54
P	LYS55
P	ASN96
P	TYR101

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Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEATH

Chain	Residue	Details
L	TYR197-HIS203

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