Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003924 | molecular_function | GTPase activity |
A | 0005525 | molecular_function | GTP binding |
A | 0032482 | biological_process | Rab protein signal transduction |
B | 0003924 | molecular_function | GTPase activity |
B | 0005525 | molecular_function | GTP binding |
B | 0032482 | biological_process | Rab protein signal transduction |
C | 0000045 | biological_process | autophagosome assembly |
D | 0000045 | biological_process | autophagosome assembly |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue MG A 301 |
Chain | Residue |
A | THR47 |
A | THR65 |
A | GTP302 |
A | HOH415 |
A | HOH417 |
site_id | AC2 |
Number of Residues | 24 |
Details | binding site for residue GTP A 302 |
Chain | Residue |
A | LYS46 |
A | THR47 |
A | CYS48 |
A | THR62 |
A | THR65 |
A | GLY91 |
A | ASN148 |
A | LYS149 |
A | ASP151 |
A | LEU152 |
A | SER178 |
A | ALA179 |
A | LYS180 |
A | MG301 |
A | PEG304 |
A | HOH415 |
A | HOH417 |
A | HOH419 |
A | HOH439 |
A | HOH456 |
A | SER42 |
A | ASN43 |
A | VAL44 |
A | GLY45 |
site_id | AC3 |
Number of Residues | 9 |
Details | binding site for residue PO4 A 303 |
Chain | Residue |
A | LYS133 |
A | LEU136 |
A | ALA138 |
A | PEG306 |
A | HOH422 |
B | THR160 |
B | GLU176 |
B | ASN185 |
B | PEG308 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue PEG A 304 |
Chain | Residue |
A | ASP115 |
A | THR117 |
A | ASN118 |
A | LYS149 |
A | GTP302 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue PEG A 305 |
Chain | Residue |
A | HIS123 |
A | LEU162 |
A | PHE166 |
A | HOH402 |
A | HOH414 |
site_id | AC6 |
Number of Residues | 11 |
Details | binding site for residue PEG A 306 |
Chain | Residue |
A | ILE129 |
A | CYS132 |
A | LYS133 |
A | LEU136 |
A | ARG143 |
A | PO4303 |
A | HOH422 |
A | HOH447 |
B | ARG153 |
B | ASP184 |
B | ASN185 |
site_id | AC7 |
Number of Residues | 3 |
Details | binding site for residue PO4 C 301 |
Chain | Residue |
C | GLU197 |
D | TRP194 |
D | GLU197 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue MG B 301 |
Chain | Residue |
B | THR47 |
B | THR65 |
B | GTP302 |
site_id | AC9 |
Number of Residues | 23 |
Details | binding site for residue GTP B 302 |
Chain | Residue |
B | SER42 |
B | ASN43 |
B | VAL44 |
B | GLY45 |
B | LYS46 |
B | THR47 |
B | CYS48 |
B | THR62 |
B | ALA64 |
B | THR65 |
B | GLY91 |
B | ASN148 |
B | LYS149 |
B | ASP151 |
B | LEU152 |
B | SER178 |
B | ALA179 |
B | LYS180 |
B | MG301 |
B | HOH410 |
B | HOH425 |
B | HOH434 |
B | HOH445 |
site_id | AD1 |
Number of Residues | 9 |
Details | binding site for residue PO4 B 303 |
Chain | Residue |
A | THR160 |
A | GLU176 |
A | HOH410 |
B | LYS133 |
B | LEU136 |
B | ALA138 |
B | EDO304 |
B | HOH406 |
B | HOH460 |
site_id | AD2 |
Number of Residues | 9 |
Details | binding site for residue EDO B 304 |
Chain | Residue |
B | CYS132 |
B | LYS133 |
B | LEU136 |
B | ARG143 |
B | PO4303 |
B | HOH429 |
B | HOH435 |
A | ARG153 |
A | ASN185 |
site_id | AD3 |
Number of Residues | 6 |
Details | binding site for residue PEG B 305 |
Chain | Residue |
A | THR169 |
B | ARG52 |
B | LYS180 |
B | ASN181 |
B | PRO182 |
B | HOH474 |
site_id | AD4 |
Number of Residues | 3 |
Details | binding site for residue PEG B 306 |
Chain | Residue |
B | ALA120 |
B | HIS123 |
B | SER124 |
site_id | AD5 |
Number of Residues | 2 |
Details | binding site for residue EDO B 307 |
Chain | Residue |
A | HIS187 |
B | HIS170 |
site_id | AD6 |
Number of Residues | 7 |
Details | binding site for residue PEG B 308 |
Chain | Residue |
A | LYS133 |
A | GLN134 |
A | PO4303 |
B | LEU174 |
B | GLU176 |
B | ASN185 |
B | ASP186 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue PEG B 309 |
Chain | Residue |
B | TYR104 |
B | ASN106 |
B | VAL107 |
B | LEU136 |
B | LEU137 |
site_id | AD8 |
Number of Residues | 4 |
Details | binding site for residue PEG B 310 |
Chain | Residue |
B | SER127 |
B | TRP128 |
B | GLU131 |
B | HOH401 |
site_id | AD9 |
Number of Residues | 8 |
Details | binding site for residue PEG B 311 |
Chain | Residue |
B | ASP41 |
B | SER42 |
B | ASN43 |
B | VAL44 |
B | ASP115 |
B | ASN118 |
B | SER121 |
B | HOH459 |
site_id | AE1 |
Number of Residues | 4 |
Details | binding site for residue PO4 D 301 |
Chain | Residue |
B | ARG94 |
C | GLU186 |
D | GLN188 |
D | VAL191 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | ILE39 | |
A | ASP88 | |
A | ASN148 | |
B | ILE39 | |
B | ASP88 | |
B | ASN148 | |