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6WPF

Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and d4T

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue D4M P 901
ChainResidue
ALYS66
PHOH1006
AASP110
ALYS220
AGLN222
ALEU228
AD4T603
AHOH708
PDG822
PMG903

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 P 902
ChainResidue
PDG816
PG47817
TDG710
TDC711

site_idAC3
Number of Residues6
Detailsbinding site for residue MG P 903
ChainResidue
AASP110
AASP185
AMG602
AD4T603
PDG822
PD4M901

site_idAC4
Number of Residues3
Detailsbinding site for residue SO4 T 801
ChainResidue
PHOH1001
TDG707
TDG708

site_idAC5
Number of Residues4
Detailsbinding site for residue MG A 601
ChainResidue
AASP443
AGLU478
AASP498
AHOH709

site_idAC6
Number of Residues6
Detailsbinding site for residue MG A 602
ChainResidue
AASP110
AVAL111
AASP185
ALYS220
AD4T603
PMG903

site_idAC7
Number of Residues20
Detailsbinding site for residue D4T A 603
ChainResidue
ALYS65
ALYS70
AARG72
AASP110
AVAL111
AGLY112
AASP113
AALA114
ATYR115
AGLN151
AASP185
ALYS220
AMG602
AHOH708
AHOH734
PDG822
PD4M901
PMG903
TDA705
THOH901

site_idAC8
Number of Residues5
Detailsbinding site for residue SO4 A 604
ChainResidue
AARG206
AASN460
AARG461
AHOH704
BALA288

site_idAC9
Number of Residues7
Detailsbinding site for residue SO4 A 605
ChainResidue
ALYS101
ALYS103
AVAL106
ATYR188
AHIS235
APRO236
ATYR318

site_idAD1
Number of Residues8
Detailsbinding site for residue GOL B 501
ChainResidue
ALEU92
AVAL381
BGLN23
BTRP24
BPRO25
BPRO133
BSER134
BASN137

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
BASP110
BASP185
BASP186

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
BTRP401
BTRP414

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
AASP549
BPHE440

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
ATRP414
ATRP401

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
APHE440

site_idSWS_FT_FI6
Number of Residues1
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
ALEU560

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 175
ChainResidueDetails

221051

PDB entries from 2024-06-12

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