English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6VC7

Structure of the F349A mutant of the periplasmic domain of YejM from Salmonella typhimurium

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003824	molecular_function	catalytic activity
A	0008484	molecular_function	sulfuric ester hydrolase activity
B	0003824	molecular_function	catalytic activity
B	0008484	molecular_function	sulfuric ester hydrolase activity
C	0003824	molecular_function	catalytic activity
C	0008484	molecular_function	sulfuric ester hydrolase activity
D	0003824	molecular_function	catalytic activity
D	0008484	molecular_function	sulfuric ester hydrolase activity
E	0003824	molecular_function	catalytic activity
E	0008484	molecular_function	sulfuric ester hydrolase activity
F	0003824	molecular_function	catalytic activity
F	0008484	molecular_function	sulfuric ester hydrolase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	binding site for residue P6G A 1801

Chain	Residue
A	SER314
A	GLY316
A	ASN548
A	ASN549
A	LYS581
A	ILE584
A	PG41811

site_id	AC2
Number of Residues	3
Details	binding site for residue PGE A 1802

Chain	Residue
A	ARG501
A	TRP477
A	THR480

site_id	AC3
Number of Residues	6
Details	binding site for residue PEG A 1803

Chain	Residue
A	GLN288
A	ASN289
A	ARG435
A	PHE440
A	HIS476
A	THR480

site_id	AC4
Number of Residues	4
Details	binding site for residue ETA A 1804

Chain	Residue
A	ARG451
A	HOH1904
A	HOH1938
A	HOH2036

site_id	AC5
Number of Residues	2
Details	binding site for residue EDO A 1805

Chain	Residue
A	ASN428
A	ASN432

site_id	AC6
Number of Residues	6
Details	binding site for residue EDO A 1806

Chain	Residue
A	SER371
A	ASP372
A	ALA373
A	ASP422
A	GLN426
A	HOH2026

site_id	AC7
Number of Residues	3
Details	binding site for residue EDO A 1807

Chain	Residue
A	SER571
A	GLN575
A	HOH1944

site_id	AC8
Number of Residues	7
Details	binding site for residue EDO A 1808

Chain	Residue
A	GLN554
A	TYR556
A	LYS562
A	HOH1906
A	HOH1927
B	GLU276
B	HOH872

site_id	AC9
Number of Residues	6
Details	binding site for residue EDO A 1809

Chain	Residue
A	GLN500
A	PRO508
A	ALA509
A	EDO1810
A	HOH2035
A	HOH2049

site_id	AD1
Number of Residues	6
Details	binding site for residue EDO A 1810

Chain	Residue
A	GLN516
A	THR520
A	ARG524
A	EDO1809
A	HOH1974
A	HOH2035

site_id	AD2
Number of Residues	4
Details	binding site for residue PG4 A 1811

Chain	Residue
A	LYS581
A	P6G1801
A	HOH2012
C	LYS581

site_id	AD3
Number of Residues	3
Details	binding site for residue MG A 1812

Chain	Residue
A	THR302
A	HOH2066
A	HOH2078

site_id	AD4
Number of Residues	2
Details	binding site for residue K A 1813

Chain	Residue
A	TYR553
C	TYR553

site_id	AD5
Number of Residues	3
Details	binding site for residue ETA B 601

Chain	Residue
B	ARG451
B	PRO454
B	HOH749

site_id	AD6
Number of Residues	6
Details	binding site for residue EDO B 602

Chain	Residue
B	ARG254
B	GLN500
B	SER506
B	EDO603
B	P6G606
B	HOH722

site_id	AD7
Number of Residues	5
Details	binding site for residue EDO B 603

Chain	Residue
B	GLN500
B	PRO508
B	ALA509
B	EDO602
B	HOH844

site_id	AD8
Number of Residues	7
Details	binding site for residue EDO B 604

Chain	Residue
B	GLN340
B	GLY342
B	PHE344
B	TRP382
B	TRP393
B	PHE394
B	SER395

site_id	AD9
Number of Residues	5
Details	binding site for residue EDO B 605

Chain	Residue
B	GLU436
B	ALA437
B	GLY438
C	VAL521
C	PRO522

site_id	AE1
Number of Residues	7
Details	binding site for residue P6G B 606

Chain	Residue
B	TRP477
B	THR480
B	ARG501
B	PHE519
B	EDO602
B	HOH722
B	HOH767

site_id	AE2
Number of Residues	3
Details	binding site for residue PGE B 607

Chain	Residue
B	LYS581
B	PG4608
E	EDO605

site_id	AE3
Number of Residues	10
Details	binding site for residue PG4 B 608

Chain	Residue
B	THR535
B	ASN548
B	ASN549
B	LYS581
B	ILE584
B	PGE607
B	SER314
B	GLY316
B	ASP532
B	SER534

site_id	AE4
Number of Residues	2
Details	binding site for residue MG B 609

Chain	Residue
B	THR302
B	HOH885

site_id	AE5
Number of Residues	2
Details	binding site for residue K B 610

Chain	Residue
B	TYR553
E	TYR553

site_id	AE6
Number of Residues	5
Details	binding site for residue EDO C 1701

Chain	Residue
A	LYS567
A	PRO568
C	HIS552
C	GLN566
C	HOH1903

site_id	AE7
Number of Residues	3
Details	binding site for residue ETA C 1702

Chain	Residue
C	ARG451
C	HOH1860
C	HOH1897

site_id	AE8
Number of Residues	10
Details	binding site for residue P6G C 1703

Chain	Residue
C	SER314
C	GLY316
C	ASP532
C	THR535
C	ASN548
C	ASN549
C	GLU580
C	LYS581
C	ILE584
C	HOH1942

site_id	AE9
Number of Residues	4
Details	binding site for residue EDO C 1704

Chain	Residue
C	ASN550
C	HIS552
D	ARG274
D	LYS277

site_id	AF1
Number of Residues	6
Details	binding site for residue EDO C 1705

Chain	Residue
C	SER371
C	ASP372
C	ALA373
C	ASP422
C	GLN426
C	HOH1958

site_id	AF2
Number of Residues	6
Details	binding site for residue EDO C 1706

Chain	Residue
C	PHE462
C	ASP463
C	TRP464
C	VAL546
C	HOH1844
C	HOH1938

site_id	AF3
Number of Residues	5
Details	binding site for residue EDO C 1707

Chain	Residue
C	GLN500
C	PRO508
C	ALA509
C	ARG524
C	HOH1804

site_id	AF4
Number of Residues	3
Details	binding site for residue 1PE C 1708

Chain	Residue
C	THR480
C	ARG501
C	PHE519

site_id	AF5
Number of Residues	4
Details	binding site for residue MG C 1709

Chain	Residue
C	THR302
C	ARG451
C	HOH1980
C	HOH1997

site_id	AF6
Number of Residues	4
Details	binding site for residue ETA D 601

Chain	Residue
D	ARG451
D	PRO454
D	HIS468
D	HOH793

site_id	AF7
Number of Residues	5
Details	binding site for residue 1PE D 602

Chain	Residue
D	SER314
D	GLY316
D	ASP532
D	ASN549
D	LYS581

site_id	AF8
Number of Residues	3
Details	binding site for residue EDO D 603

Chain	Residue
D	ASP532
D	GLY533
D	SER534

site_id	AF9
Number of Residues	4
Details	binding site for residue PG4 D 604

Chain	Residue
D	TRP477
D	THR480
D	ARG501
D	HOH801

site_id	AG1
Number of Residues	4
Details	binding site for residue MG D 605

Chain	Residue
D	THR301
D	THR302
D	ARG451
D	HOH834

site_id	AG2
Number of Residues	2
Details	binding site for residue K D 606

Chain	Residue
D	TYR553
F	TYR553

site_id	AG3
Number of Residues	2
Details	binding site for residue ETA E 601

Chain	Residue
E	ARG451
E	HOH734

site_id	AG4
Number of Residues	6
Details	binding site for residue 1PE E 602

Chain	Residue
E	SER314
E	GLY316
E	SER534
E	ASN549
E	GLU580
E	LYS581

site_id	AG5
Number of Residues	3
Details	binding site for residue EDO E 603

Chain	Residue
D	ARG355
E	GLY259
E	ARG392

site_id	AG6
Number of Residues	2
Details	binding site for residue EDO E 604

Chain	Residue
E	ARG274
E	GLN278

site_id	AG7
Number of Residues	3
Details	binding site for residue EDO E 605

Chain	Residue
B	PGE607
E	LYS581
E	HOH767

site_id	AG8
Number of Residues	3
Details	binding site for residue EDO E 606

Chain	Residue
E	GLN500
E	ASP517
E	THR520

site_id	AG9
Number of Residues	4
Details	binding site for residue PG4 E 607

Chain	Residue
E	TRP477
E	THR480
E	ARG501
E	PHE519

site_id	AH1
Number of Residues	4
Details	binding site for residue MG E 608

Chain	Residue
E	THR301
E	THR302
E	ARG451
E	HOH826

site_id	AH2
Number of Residues	1
Details	binding site for residue ETA F 601

Chain	Residue
F	ARG451

site_id	AH3
Number of Residues	3
Details	binding site for residue EDO F 602

Chain	Residue
B	ARG355
F	ASP390
F	ARG392

site_id	AH4
Number of Residues	6
Details	binding site for residue PG4 F 603

Chain	Residue
F	TRP477
F	THR480
F	GLN483
F	ARG501
F	PHE519
F	HOH726

site_id	AH5
Number of Residues	8
Details	binding site for residue PG4 F 604

Chain	Residue
F	SER314
F	GLY316
F	ASP532
F	THR535
F	GLU580
F	LYS581
F	PG4605
F	HOH731

site_id	AH6
Number of Residues	4
Details	binding site for residue PG4 F 605

Chain	Residue
F	LEU547
F	ASN549
F	LYS581
F	PG4604

site_id	AH7
Number of Residues	2
Details	binding site for residue MG F 606

Chain	Residue
F	THR302
F	ARG451

219869

PDB entries from 2024-05-15

PDB statistics

PDBj update info

Contact PDBj

numon