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6V7I

Structure of KPC-2 bound to Vaborbactam at 1.25 A

Functional Information from GO Data
ChainGOidnamespacecontents
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0030655biological_processbeta-lactam antibiotic catabolic process
A0046677biological_processresponse to antibiotic
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue 4D6 A 301
ChainResidue
ACYS69
AGLY236
ATHR237
AHOH408
AHOH502
AHOH527
ASER70
ATRP105
ASER130
AASN132
ALEU167
AASN170
AARG220
ATHR235

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 302
ChainResidue
ASER275
AGLU276
AALA277
AHOH430
AHOH471

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 303
ChainResidue
AARG61
ATHR254
AGLY255
AHOH422
AHOH466

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 304
ChainResidue
ALYS273
AHIS274
AHOH507
AHOH554

site_idAC5
Number of Residues8
Detailsbinding site for residue SO4 A 305
ChainResidue
ATHR26
AARG184
APRO226
AALA227
AGLN295
AHOH401
AHOH411
AHOH414

site_idAC6
Number of Residues7
Detailsbinding site for residue GOL A 306
ChainResidue
AGLN205
AVAL208
ALYS212
ATRP251
AHOH420
AHOH449
AHOH524

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile; acyl-ester intermediate => ECO:0000269|PubMed:33257320, ECO:0007744|PDB:6Z23, ECO:0007744|PDB:6Z24
ChainResidueDetails
ASER70

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000250
ChainResidueDetails
AGLU168

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:28388065, ECO:0000269|PubMed:33257320, ECO:0007744|PDB:5UJ3, ECO:0007744|PDB:6Z23, ECO:0007744|PDB:6Z24
ChainResidueDetails
ASER70
ATHR237

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:28388065, ECO:0007744|PDB:5UJ3
ChainResidueDetails
ALYS73

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:33257320, ECO:0000312|PDB:6Z24
ChainResidueDetails
ATRP105

site_idSWS_FT_FI6
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:28388065, ECO:0000269|PubMed:33257320, ECO:0007744|PDB:5UJ3, ECO:0007744|PDB:6Z23
ChainResidueDetails
ASER130

site_idSWS_FT_FI7
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:33257320, ECO:0007744|PDB:6Z23, ECO:0007744|PDB:6Z24
ChainResidueDetails
AASN132

site_idSWS_FT_FI8
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:28388065, ECO:0007744|PDB:5UJ3, ECO:0007744|PDB:6Z24
ChainResidueDetails
ATHR235

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PDB entries from 2025-07-02

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