6URI

HIV-1 Nef in complex with the CD4 cytoplasmic domain and the AP2 clathrin adaptor complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005794	cellular_component	Golgi apparatus
A	0006886	biological_process	intracellular protein transport
A	0016192	biological_process	vesicle-mediated transport
A	0030117	cellular_component	membrane coat
A	0030121	cellular_component	AP-1 adaptor complex
B	0006886	biological_process	intracellular protein transport
B	0015031	biological_process	protein transport
B	0016192	biological_process	vesicle-mediated transport
B	0030117	cellular_component	membrane coat
B	0030276	molecular_function	clathrin binding
M	0006886	biological_process	intracellular protein transport
M	0016192	biological_process	vesicle-mediated transport
M	0030131	cellular_component	clathrin adaptor complex
N	0005525	molecular_function	GTP binding
S	0005515	molecular_function	protein binding
S	0005829	cellular_component	cytosol
S	0005886	cellular_component	plasma membrane
S	0005905	cellular_component	clathrin-coated pit
S	0006886	biological_process	intracellular protein transport
S	0006897	biological_process	endocytosis
S	0009898	cellular_component	cytoplasmic side of plasma membrane
S	0015031	biological_process	protein transport
S	0016020	cellular_component	membrane
S	0016192	biological_process	vesicle-mediated transport
S	0030100	biological_process	regulation of endocytosis
S	0030117	cellular_component	membrane coat
S	0030122	cellular_component	AP-2 adaptor complex
S	0030666	cellular_component	endocytic vesicle membrane
S	0030669	cellular_component	clathrin-coated endocytic vesicle membrane
S	0035615	molecular_function	clathrin adaptor activity
S	0036020	cellular_component	endolysosome membrane
S	0045202	cellular_component	synapse
S	0045334	cellular_component	clathrin-coated endocytic vesicle
S	0048268	biological_process	clathrin coat assembly
S	0048488	biological_process	synaptic vesicle endocytosis
S	0072583	biological_process	clathrin-dependent endocytosis
S	0098793	cellular_component	presynapse
S	0098794	cellular_component	postsynapse
S	0098884	biological_process	postsynaptic neurotransmitter receptor internalization

Functional Information from PROSITE/UniProt

site_id	PS00989
Number of Residues	11
Details	CLAT_ADAPTOR_S Clathrin adaptor complexes small chain signature. IIYRryagLYF

Chain	Residue	Details
S	ILE57-PHE67

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI2
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18691976","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI11
Number of Residues	1
Details	Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI12
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"2105883","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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