6UKD
Co-complex of S. pyogenes 10782 streptopain bound with a nitrile-based specific covalent inhibitor
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004197 | molecular_function | cysteine-type endopeptidase activity |
| A | 0005576 | cellular_component | extracellular region |
| A | 0006508 | biological_process | proteolysis |
| A | 0008233 | molecular_function | peptidase activity |
| A | 0008234 | molecular_function | cysteine-type peptidase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0030430 | cellular_component | host cell cytoplasm |
| A | 0034050 | biological_process | symbiont-induced defense-related programmed cell death |
| A | 0035893 | biological_process | obsolete suppression of platelet aggregation in another organism |
| A | 0042783 | biological_process | symbiont-mediated evasion of host immune response |
| A | 0043655 | cellular_component | host extracellular space |
| A | 0044164 | cellular_component | host cell cytosol |
| A | 0052035 | biological_process | obsolete positive regulation by symbiont of host inflammatory response |
| A | 0090729 | molecular_function | toxin activity |
| A | 0140321 | biological_process | symbiont-mediated suppression of host autophagy |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | binding site for residue Q9D A 501 |
| Chain | Residue |
| A | GLN162 |
| A | GLY333 |
| A | VAL334 |
| A | GLY339 |
| A | HIS340 |
| A | HOH689 |
| A | HOH764 |
| A | HOH835 |
| A | CYS192 |
| A | VAL193 |
| A | ASN208 |
| A | SER280 |
| A | GLY281 |
| A | SER282 |
| A | ALA283 |
| A | GLN332 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | binding site for residue NO3 A 502 |
| Chain | Residue |
| A | ASN164 |
| A | PRO165 |
| A | LYS258 |
| A | PHE367 |
| A | ASN373 |
| A | SER375 |
| A | HOH608 |
| A | HOH702 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue NO3 A 503 |
| Chain | Residue |
| A | GLY335 |
| A | LYS336 |
| A | GLY384 |
| A | GLY385 |
| A | ASN387 |
| A | HOH603 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 22 |
| Details | Region: {"description":"C-terminal active site loop","evidences":[{"source":"PubMed","id":"22645124","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"19712682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22645124","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8675287","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"19712682","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"22645124","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4D8E","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Binding site: {"description":"covalent","evidences":[{"source":"PubMed","id":"19712682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22645124","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2UZJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4D8E","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"22645124","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"4D8I","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Cysteine methyl disulfide; in zymogen form","evidences":[{"source":"PubMed","id":"6381494","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | MCSA1 |
| Number of Residues | 3 |
| Details | M-CSA 598 |
| Chain | Residue | Details |
| A | CYS192 | |
| A | HIS340 | proton shuttle (general acid/base) |
| A | TRP357 |






