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6TJ9

Escherichia coli transketolase in complex with cofactor analog 2'-methoxythiamine and substrate xylulose 5-phosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003824molecular_functioncatalytic activity
A0004802molecular_functiontransketolase activity
A0005829cellular_componentcytosol
A0006098biological_processpentose-phosphate shunt
A0009052biological_processpentose-phosphate shunt, non-oxidative branch
A0016740molecular_functiontransferase activity
A0030145molecular_functionmanganese ion binding
A0030976molecular_functionthiamine pyrophosphate binding
A0042803molecular_functionprotein homodimerization activity
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0003824molecular_functioncatalytic activity
B0004802molecular_functiontransketolase activity
B0005829cellular_componentcytosol
B0006098biological_processpentose-phosphate shunt
B0009052biological_processpentose-phosphate shunt, non-oxidative branch
B0016740molecular_functiontransferase activity
B0030145molecular_functionmanganese ion binding
B0030976molecular_functionthiamine pyrophosphate binding
B0042803molecular_functionprotein homodimerization activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue 5SP A 701
ChainResidue
AARG358
AHOH901
AHOH1078
AHOH1131
AHOH1211
AHOH1328
BHIS26
BHIS261
BNDQ701
ASER385
APHE434
AHIS461
AASP469
AHIS473
AARG520
AEDO708
AHOH833

site_idAC2
Number of Residues25
Detailsbinding site for residue NDQ A 702
ChainResidue
AALA29
AHIS66
AGLY114
ALEU116
AGLY154
AASP155
AGLY156
AGLU160
AASN185
AILE187
ASER188
AILE189
AILE247
AHIS261
ACA703
AHOH808
AHOH869
AHOH924
AHOH1207
BASP381
BGLU411
BPHE437
BTYR440
B5SP703
BHOH814

site_idAC3
Number of Residues5
Detailsbinding site for residue CA A 703
ChainResidue
AASP155
AASN185
AILE187
ANDQ702
AHOH924

site_idAC4
Number of Residues6
Detailsbinding site for residue EDO A 704
ChainResidue
APHE375
ATRP390
ASER393
AASN403
ATYR404
ATYR430

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO A 705
ChainResidue
ALEU45
ALYS46
AHIS47
ALYS303
AHOH1094

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 706
ChainResidue
ASER559
AGLU560
APHE645
AHOH850
AHOH1126
AHOH1234

site_idAC7
Number of Residues9
Detailsbinding site for residue EDO A 707
ChainResidue
ALEU435
AASP462
APRO475
AVAL479
AARG492
AGLU612
AALA613
AGLY614
AHOH1100

site_idAC8
Number of Residues7
Detailsbinding site for residue EDO A 708
ChainResidue
ASER385
A5SP701
AHOH858
AHOH998
AHOH1078
BHIS261
BGLY262

site_idAC9
Number of Residues9
Detailsbinding site for residue EDO A 709
ChainResidue
ATYR182
AASP184
APHE197
ATHR198
AASP199
ATHR201
AHOH802
AHOH929
AHOH1128

site_idAD1
Number of Residues10
Detailsbinding site for residue EDO A 710
ChainResidue
AHIS47
AARG57
AASP58
APHE60
ATYR80
AGLY108
AGLU110
AHOH823
AHOH836
AHOH1116

site_idAD2
Number of Residues7
Detailsbinding site for residue EDO A 711
ChainResidue
ATYR505
AALA537
AARG538
AGLN592
AHOH830
AHOH1213
AHOH1404

site_idAD3
Number of Residues3
Detailsbinding site for residue EDO A 712
ChainResidue
ATHR326
AHOH959
AHOH1327

site_idAD4
Number of Residues6
Detailsbinding site for residue EDO A 713
ChainResidue
AARG4
AARG42
AHOH822
AHOH1074
BGLY392
BLYS394

site_idAD5
Number of Residues6
Detailsbinding site for residue EDO A 714
ChainResidue
ATYR620
AGLY624
ALEU625
AASN626
AGLY627
AHOH817

site_idAD6
Number of Residues8
Detailsbinding site for residue EDO A 715
ChainResidue
AILE615
AASP617
ATHR633
AHOH1291
BARG483
BVAL484
BPRO486
BHOH834

site_idAD7
Number of Residues7
Detailsbinding site for residue EDO A 716
ChainResidue
AGLN136
APHE137
AARG139
AHOH807
AHOH824
AHOH1342
AHOH1436

site_idAD8
Number of Residues5
Detailsbinding site for residue NA A 717
ChainResidue
AGLY176
AALA231
AVAL234
AHOH820
AHOH1104

site_idAD9
Number of Residues25
Detailsbinding site for residue NDQ B 701
ChainResidue
AASP381
AGLU411
APHE437
ATYR440
A5SP701
AHOH833
BALA29
BHIS66
BGLY114
BLEU116
BGLY154
BASP155
BGLY156
BGLU160
BASN185
BILE187
BSER188
BILE189
BILE247
BHIS261
BCA702
BHOH801
BHOH857
BHOH933
BHOH1207

site_idAE1
Number of Residues5
Detailsbinding site for residue CA B 702
ChainResidue
BASP155
BASN185
BILE187
BNDQ701
BHOH933

site_idAE2
Number of Residues16
Detailsbinding site for residue 5SP B 703
ChainResidue
AHIS26
AHIS261
ANDQ702
BARG358
BSER385
BPHE434
BHIS461
BASP469
BHIS473
BARG520
BHOH814
BHOH861
BHOH915
BHOH1090
BHOH1112
BHOH1215

site_idAE3
Number of Residues7
Detailsbinding site for residue EDO B 704
ChainResidue
BPHE375
BTRP390
BSER393
BASN403
BTYR404
BTYR430
BHOH1187

site_idAE4
Number of Residues7
Detailsbinding site for residue EDO B 705
ChainResidue
BALA271
BTYR505
BGLU508
BARG509
BEDO716
BHOH904
BHOH1125

site_idAE5
Number of Residues9
Detailsbinding site for residue EDO B 706
ChainResidue
BARG274
BGLU275
BTRP279
BARG538
BGLN592
BHOH909
BHOH1176
BHOH1337
BHOH1342

site_idAE6
Number of Residues9
Detailsbinding site for residue EDO B 707
ChainResidue
BLEU435
BASP462
BPRO475
BVAL479
BARG492
BGLU612
BALA613
BGLY614
BHOH1063

site_idAE7
Number of Residues6
Detailsbinding site for residue EDO B 708
ChainResidue
BLYS21
BLYS88
BGLN92
BHOH884
BHOH886
BHOH943

site_idAE8
Number of Residues5
Detailsbinding site for residue EDO B 709
ChainResidue
BLEU272
BGLU275
BARG509
BASP511
BHOH1106

site_idAE9
Number of Residues7
Detailsbinding site for residue EDO B 710
ChainResidue
BSER559
BGLU560
BPHE645
BPHE650
BHOH833
BHOH935
BHOH1142

site_idAF1
Number of Residues11
Detailsbinding site for residue EDO B 711
ChainResidue
BLEU45
BHIS47
BARG57
BASP58
BPHE60
BTYR80
BGLY108
BGLU110
BHOH806
BHOH837
BHOH1077

site_idAF2
Number of Residues6
Detailsbinding site for residue EDO B 712
ChainResidue
BGLU6
BGLY278
BTRP279
BLYS280
BTYR281
BHOH1070

site_idAF3
Number of Residues5
Detailsbinding site for residue EDO B 713
ChainResidue
BLYS131
BTHR172
BHOH1042
BHOH1073
BHOH1183

site_idAF4
Number of Residues8
Detailsbinding site for residue EDO B 714
ChainResidue
AASP17
ALYS21
APRO283
APHE284
AHOH1052
AHOH1488
BGLN549
BALA604

site_idAF5
Number of Residues3
Detailsbinding site for residue EDO B 715
ChainResidue
BTHR326
BHOH975
BHOH1285

site_idAF6
Number of Residues7
Detailsbinding site for residue EDO B 716
ChainResidue
BALA271
BARG274
BGLU275
BEDO705
BHOH856
BHOH920
BHOH1383

site_idAF7
Number of Residues5
Detailsbinding site for residue NA B 717
ChainResidue
BGLY176
BALA231
BVAL234
BHOH820
BHOH1084

Functional Information from PROSITE/UniProt
site_idPS00801
Number of Residues21
DetailsTRANSKETOLASE_1 Transketolase signature 1. RalsMDavqkakSGHPGapMG
ChainResidueDetails
AARG12-GLY32

site_idPS00802
Number of Residues17
DetailsTRANSKETOLASE_2 Transketolase signature 2. GEDGPTHqPVEqvAslR
ChainResidueDetails
AGLY467-ARG483

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000305
ChainResidueDetails
AGLU411
BGLU411

site_idSWS_FT_FI2
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:17914867
ChainResidueDetails
AHIS26
BSER385
BHIS461
BASP469
BHIS473
BARG520
AARG358
ASER385
AHIS461
AASP469
AHIS473
AARG520
BHIS26
BARG358

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:17914867, ECO:0000269|Ref.9, ECO:0007744|PDB:1QGD, ECO:0007744|PDB:2R5N
ChainResidueDetails
AHIS66
AGLY114
AASN185
AHIS261
BHIS66
BGLY114
BASN185
BHIS261

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305|PubMed:17914867, ECO:0000305|Ref.9
ChainResidueDetails
AASP155
AILE187
BASP155
BILE187

site_idSWS_FT_FI5
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|Ref.9, ECO:0007744|PDB:1QGD
ChainResidueDetails
AGLY156
BGLY156

site_idSWS_FT_FI6
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:17914867, ECO:0000269|Ref.9
ChainResidueDetails
APHE437
BPHE437

site_idSWS_FT_FI7
Number of Residues4
DetailsSITE: Important for catalytic activity
ChainResidueDetails
AHIS26
AHIS261
BHIS26
BHIS261

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
ALYS46
BLYS46

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PDB entries from 2024-11-06

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