6T0O
Crystal structure of YTHDC1 with fragment 14 (ACA_DC1_004)
Functional Information from GO Data
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 12 |
Details | binding site for residue M6N A 601 |
Chain | Residue |
A | LYS361 |
A | LEU439 |
A | HOH705 |
A | HOH729 |
A | SER362 |
A | ASN363 |
A | ASN367 |
A | TRP377 |
A | SER378 |
A | THR379 |
A | TRP428 |
A | PRO431 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 602 |
Chain | Residue |
A | GLY344 |
A | SER346 |
A | LYS347 |
A | HOH708 |
A | HOH710 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 603 |
Chain | Residue |
A | ASN363 |
A | PRO431 |
A | ALA432 |
A | HOH706 |
B | HIS505 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue SO4 A 604 |
Chain | Residue |
A | SER417 |
A | GLU418 |
A | HIS420 |
A | HOH734 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 605 |
Chain | Residue |
A | SER419 |
A | HIS420 |
A | HIS421 |
A | HOH701 |
A | HOH744 |
site_id | AC6 |
Number of Residues | 1 |
Details | binding site for residue SO4 A 606 |
Chain | Residue |
A | HOH742 |
site_id | AC7 |
Number of Residues | 8 |
Details | binding site for residue SO4 A 607 |
Chain | Residue |
A | GLN478 |
A | GLU479 |
A | HOH712 |
A | HOH728 |
A | HOH735 |
A | HOH758 |
A | HOH818 |
B | LYS347 |
site_id | AC8 |
Number of Residues | 8 |
Details | binding site for residue M6N B 601 |
Chain | Residue |
B | SER362 |
B | ASN363 |
B | ASN367 |
B | TRP377 |
B | SER378 |
B | THR379 |
B | TRP428 |
B | LEU439 |
site_id | AC9 |
Number of Residues | 7 |
Details | binding site for residue SO4 B 602 |
Chain | Residue |
B | ARG451 |
B | GLU452 |
B | HOH712 |
B | HOH720 |
B | HOH756 |
B | HOH757 |
B | HOH787 |
site_id | AD1 |
Number of Residues | 5 |
Details | binding site for residue SO4 B 603 |
Chain | Residue |
B | SER419 |
B | HIS420 |
B | HIS421 |
B | ARG451 |
B | HOH741 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:31670957, ECO:0007744|PDB:6RT4, ECO:0007744|PDB:6RT5, ECO:0007744|PDB:6RT6, ECO:0007744|PDB:6RT7 |
Chain | Residue | Details |
A | LYS361 | |
A | ASP476 | |
B | LYS361 | |
B | ASP476 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:25242552, ECO:0000269|PubMed:31670957, ECO:0007744|PDB:6RT4, ECO:0007744|PDB:6RT5, ECO:0007744|PDB:6RT6, ECO:0007744|PDB:6RT7 |
Chain | Residue | Details |
A | TRP377 | |
B | TRP377 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:25242552 |
Chain | Residue | Details |
A | TRP428 | |
B | TRP428 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER424 | |
B | SER424 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231 |
Chain | Residue | Details |
A | SER435 | |
B | SER435 |