Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6T0O

Crystal structure of YTHDC1 with fragment 14 (ACA_DC1_004)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-14
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.472, 103.072, 41.952
Unit cell angles90.00, 106.74, 90.00
Refinement procedure
Resolution40.170 - 1.710
R-factor0.1885
Rwork0.186
R-free0.22530
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4r3h
RMSD bond length0.006
RMSD bond angle0.820
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.2001.810
High resolution limit [Å]1.7101.710
Number of reflections345495527
<I/σ(I)>12.71
Completeness [%]99.5
Redundancy3.38
CC(1/2)0.9980.722
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG3350, 0.2M Ammonium Sulphate, 0.1M bis-tris, pH 6.5

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon