Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6SKG

Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
Ab	0000028	biological_process	ribosomal small subunit assembly
Ab	0002181	biological_process	cytoplasmic translation
Ab	0003735	molecular_function	structural constituent of ribosome
Ab	0005840	cellular_component	ribosome
Ab	0006412	biological_process	translation
Ab	0015935	cellular_component	small ribosomal subunit
Ab	0022627	cellular_component	cytosolic small ribosomal subunit
Ab	0030686	cellular_component	90S preribosome
Ab	1990904	cellular_component	ribonucleoprotein complex
Ac	0003676	molecular_function	nucleic acid binding
Ac	0003723	molecular_function	RNA binding
Ac	0003735	molecular_function	structural constituent of ribosome
Ac	0005840	cellular_component	ribosome
Ac	0006412	biological_process	translation
Ac	0015935	cellular_component	small ribosomal subunit
Ac	0019843	molecular_function	rRNA binding
Ac	0022627	cellular_component	cytosolic small ribosomal subunit
Ac	1990904	cellular_component	ribonucleoprotein complex
Ac	2001235	biological_process	positive regulation of apoptotic signaling pathway
Ad	0003735	molecular_function	structural constituent of ribosome
Ad	0005829	cellular_component	cytosol
Ad	0005840	cellular_component	ribosome
Ad	0006412	biological_process	translation
Ad	1990904	cellular_component	ribonucleoprotein complex
Ae	0003723	molecular_function	RNA binding
Ae	0003735	molecular_function	structural constituent of ribosome
Ae	0005840	cellular_component	ribosome
Ae	0006412	biological_process	translation
Ae	0015935	cellular_component	small ribosomal subunit
Ae	0019843	molecular_function	rRNA binding
Ae	0022627	cellular_component	cytosolic small ribosomal subunit
Ae	0042274	biological_process	ribosomal small subunit biogenesis
Ae	0043226	cellular_component	organelle
Ae	1990904	cellular_component	ribonucleoprotein complex
Af	0003723	molecular_function	RNA binding
Af	0003735	molecular_function	structural constituent of ribosome
Af	0005840	cellular_component	ribosome
Af	0006412	biological_process	translation
Af	0019843	molecular_function	rRNA binding
Af	0022627	cellular_component	cytosolic small ribosomal subunit
Af	1990904	cellular_component	ribonucleoprotein complex
Ag	0003723	molecular_function	RNA binding
Ag	0003735	molecular_function	structural constituent of ribosome
Ag	0005737	cellular_component	cytoplasm
Ag	0005840	cellular_component	ribosome
Ag	0006412	biological_process	translation
Ag	0015935	cellular_component	small ribosomal subunit
Ag	0019843	molecular_function	rRNA binding
Ag	0022627	cellular_component	cytosolic small ribosomal subunit
Ag	0043229	cellular_component	intracellular organelle
Ag	1990904	cellular_component	ribonucleoprotein complex
Ah	0003735	molecular_function	structural constituent of ribosome
Ah	0005840	cellular_component	ribosome
Ah	0006412	biological_process	translation
Ah	1990904	cellular_component	ribonucleoprotein complex
Ai	0000028	biological_process	ribosomal small subunit assembly
Ai	0003723	molecular_function	RNA binding
Ai	0003729	molecular_function	mRNA binding
Ai	0003735	molecular_function	structural constituent of ribosome
Ai	0005840	cellular_component	ribosome
Ai	0006412	biological_process	translation
Ai	0015935	cellular_component	small ribosomal subunit
Ai	0019843	molecular_function	rRNA binding
Ai	0022627	cellular_component	cytosolic small ribosomal subunit
Ai	1990904	cellular_component	ribonucleoprotein complex
Aj	0003723	molecular_function	RNA binding
Aj	0003735	molecular_function	structural constituent of ribosome
Aj	0005840	cellular_component	ribosome
Aj	0006412	biological_process	translation
Aj	0019843	molecular_function	rRNA binding
Aj	0022627	cellular_component	cytosolic small ribosomal subunit
Aj	1990904	cellular_component	ribonucleoprotein complex
Ak	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ak	0003735	molecular_function	structural constituent of ribosome
Ak	0005840	cellular_component	ribosome
Ak	0006412	biological_process	translation
Ak	0022627	cellular_component	cytosolic small ribosomal subunit
Ak	1990904	cellular_component	ribonucleoprotein complex
Al	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Al	0003723	molecular_function	RNA binding
Al	0003735	molecular_function	structural constituent of ribosome
Al	0005840	cellular_component	ribosome
Al	0006412	biological_process	translation
Al	0022627	cellular_component	cytosolic small ribosomal subunit
Al	1990904	cellular_component	ribonucleoprotein complex
Am	0000049	molecular_function	tRNA binding
Am	0003723	molecular_function	RNA binding
Am	0003735	molecular_function	structural constituent of ribosome
Am	0005840	cellular_component	ribosome
Am	0006412	biological_process	translation
Am	0015935	cellular_component	small ribosomal subunit
Am	0022627	cellular_component	cytosolic small ribosomal subunit
Am	1990904	cellular_component	ribonucleoprotein complex
An	0000028	biological_process	ribosomal small subunit assembly
An	0003723	molecular_function	RNA binding
An	0003735	molecular_function	structural constituent of ribosome
An	0005840	cellular_component	ribosome
An	0006412	biological_process	translation
An	0019843	molecular_function	rRNA binding
An	0022627	cellular_component	cytosolic small ribosomal subunit
An	1990904	cellular_component	ribonucleoprotein complex
Ao	0003723	molecular_function	RNA binding
Ao	0003735	molecular_function	structural constituent of ribosome
Ao	0005840	cellular_component	ribosome
Ao	0006412	biological_process	translation
Ao	0015935	cellular_component	small ribosomal subunit
Ao	0019843	molecular_function	rRNA binding
Ao	0022627	cellular_component	cytosolic small ribosomal subunit
Ao	1990904	cellular_component	ribonucleoprotein complex
Ap	0003676	molecular_function	nucleic acid binding
Ap	0003723	molecular_function	RNA binding
Ap	0003735	molecular_function	structural constituent of ribosome
Ap	0005829	cellular_component	cytosol
Ap	0005840	cellular_component	ribosome
Ap	0006412	biological_process	translation
Ap	0015935	cellular_component	small ribosomal subunit
Ap	0019843	molecular_function	rRNA binding
Ap	1990904	cellular_component	ribonucleoprotein complex
Aq	0003735	molecular_function	structural constituent of ribosome
Aq	0005840	cellular_component	ribosome
Aq	0006412	biological_process	translation
Aq	0022627	cellular_component	cytosolic small ribosomal subunit
Aq	0070181	molecular_function	small ribosomal subunit rRNA binding
Aq	1990904	cellular_component	ribonucleoprotein complex
Ar	0002181	biological_process	cytoplasmic translation
Ar	0003723	molecular_function	RNA binding
Ar	0003735	molecular_function	structural constituent of ribosome
Ar	0005840	cellular_component	ribosome
Ar	0006412	biological_process	translation
Ar	0008270	molecular_function	zinc ion binding
Ar	0015935	cellular_component	small ribosomal subunit
Ar	0019843	molecular_function	rRNA binding
Ar	0022627	cellular_component	cytosolic small ribosomal subunit
Ar	0046872	molecular_function	metal ion binding
Ar	1990904	cellular_component	ribonucleoprotein complex
As	0003723	molecular_function	RNA binding
As	0003735	molecular_function	structural constituent of ribosome
As	0005840	cellular_component	ribosome
As	0006412	biological_process	translation
As	0019843	molecular_function	rRNA binding
As	0022627	cellular_component	cytosolic small ribosomal subunit
As	1990904	cellular_component	ribonucleoprotein complex
At	0003735	molecular_function	structural constituent of ribosome
At	0005829	cellular_component	cytosol
At	0005840	cellular_component	ribosome
At	0006412	biological_process	translation
At	1990904	cellular_component	ribonucleoprotein complex
Au	0000028	biological_process	ribosomal small subunit assembly
Au	0003723	molecular_function	RNA binding
Au	0003735	molecular_function	structural constituent of ribosome
Au	0005737	cellular_component	cytoplasm
Au	0005840	cellular_component	ribosome
Au	0006412	biological_process	translation
Au	0015935	cellular_component	small ribosomal subunit
Au	0019843	molecular_function	rRNA binding
Au	0022627	cellular_component	cytosolic small ribosomal subunit
Au	0043229	cellular_component	intracellular organelle
Au	1990904	cellular_component	ribonucleoprotein complex
Av	0000028	biological_process	ribosomal small subunit assembly
Av	0003723	molecular_function	RNA binding
Av	0003735	molecular_function	structural constituent of ribosome
Av	0005840	cellular_component	ribosome
Av	0006412	biological_process	translation
Av	0022627	cellular_component	cytosolic small ribosomal subunit
Av	1990904	cellular_component	ribonucleoprotein complex
Aw	0003735	molecular_function	structural constituent of ribosome
Aw	0005840	cellular_component	ribosome
Aw	0006412	biological_process	translation
Aw	1990904	cellular_component	ribonucleoprotein complex
Ax	0000028	biological_process	ribosomal small subunit assembly
Ax	0003723	molecular_function	RNA binding
Ax	0003735	molecular_function	structural constituent of ribosome
Ax	0005840	cellular_component	ribosome
Ax	0006412	biological_process	translation
Ax	0008270	molecular_function	zinc ion binding
Ax	0022627	cellular_component	cytosolic small ribosomal subunit
Ax	0046872	molecular_function	metal ion binding
Ax	1990904	cellular_component	ribonucleoprotein complex
Ay	0000028	biological_process	ribosomal small subunit assembly
Ay	0003735	molecular_function	structural constituent of ribosome
Ay	0005840	cellular_component	ribosome
Ay	0006412	biological_process	translation
Ay	0022627	cellular_component	cytosolic small ribosomal subunit
Ay	0030490	biological_process	maturation of SSU-rRNA
Ay	1990904	cellular_component	ribonucleoprotein complex
BC	0002181	biological_process	cytoplasmic translation
BC	0003723	molecular_function	RNA binding
BC	0003735	molecular_function	structural constituent of ribosome
BC	0005840	cellular_component	ribosome
BC	0006412	biological_process	translation
BC	0015934	cellular_component	large ribosomal subunit
BC	0019843	molecular_function	rRNA binding
BC	0022625	cellular_component	cytosolic large ribosomal subunit
BC	0022626	cellular_component	cytosolic ribosome
BC	1990904	cellular_component	ribonucleoprotein complex
BD	0003723	molecular_function	RNA binding
BD	0003735	molecular_function	structural constituent of ribosome
BD	0005840	cellular_component	ribosome
BD	0006412	biological_process	translation
BD	0019843	molecular_function	rRNA binding
BD	0022625	cellular_component	cytosolic large ribosomal subunit
BD	1990904	cellular_component	ribonucleoprotein complex
BE	0003723	molecular_function	RNA binding
BE	0003735	molecular_function	structural constituent of ribosome
BE	0005840	cellular_component	ribosome
BE	0006412	biological_process	translation
BE	0019843	molecular_function	rRNA binding
BE	0022625	cellular_component	cytosolic large ribosomal subunit
BE	1990904	cellular_component	ribonucleoprotein complex
BF	0000049	molecular_function	tRNA binding
BF	0003723	molecular_function	RNA binding
BF	0003735	molecular_function	structural constituent of ribosome
BF	0005840	cellular_component	ribosome
BF	0006412	biological_process	translation
BF	0019843	molecular_function	rRNA binding
BF	0022625	cellular_component	cytosolic large ribosomal subunit
BF	1990904	cellular_component	ribonucleoprotein complex
BG	0002181	biological_process	cytoplasmic translation
BG	0003723	molecular_function	RNA binding
BG	0003735	molecular_function	structural constituent of ribosome
BG	0005840	cellular_component	ribosome
BG	0006412	biological_process	translation
BG	0019843	molecular_function	rRNA binding
BG	0022625	cellular_component	cytosolic large ribosomal subunit
BG	1990904	cellular_component	ribonucleoprotein complex
BH	0001682	biological_process	tRNA 5'-leader removal
BH	0003723	molecular_function	RNA binding
BH	0003735	molecular_function	structural constituent of ribosome
BH	0004526	molecular_function	ribonuclease P activity
BH	0005737	cellular_component	cytoplasm
BH	0005840	cellular_component	ribosome
BH	0006412	biological_process	translation
BH	0008033	biological_process	tRNA processing
BH	0019843	molecular_function	rRNA binding
BH	0022627	cellular_component	cytosolic small ribosomal subunit
BH	0042254	biological_process	ribosome biogenesis
BH	1990904	cellular_component	ribonucleoprotein complex
BI	0001682	biological_process	tRNA 5'-leader removal
BI	0003723	molecular_function	RNA binding
BI	0003735	molecular_function	structural constituent of ribosome
BI	0004526	molecular_function	ribonuclease P activity
BI	0005737	cellular_component	cytoplasm
BI	0005840	cellular_component	ribosome
BI	0006412	biological_process	translation
BI	0008033	biological_process	tRNA processing
BI	0019843	molecular_function	rRNA binding
BI	0022627	cellular_component	cytosolic small ribosomal subunit
BI	0042254	biological_process	ribosome biogenesis
BI	1990904	cellular_component	ribonucleoprotein complex
BJ	0003735	molecular_function	structural constituent of ribosome
BJ	0005840	cellular_component	ribosome
BJ	0006412	biological_process	translation
BJ	0022625	cellular_component	cytosolic large ribosomal subunit
BJ	1990904	cellular_component	ribonucleoprotein complex
BK	0003729	molecular_function	mRNA binding
BK	0003735	molecular_function	structural constituent of ribosome
BK	0005840	cellular_component	ribosome
BK	0006412	biological_process	translation
BK	0015934	cellular_component	large ribosomal subunit
BK	0017148	biological_process	negative regulation of translation
BK	0022625	cellular_component	cytosolic large ribosomal subunit
BK	1990904	cellular_component	ribonucleoprotein complex
BL	0003723	molecular_function	RNA binding
BL	0003735	molecular_function	structural constituent of ribosome
BL	0005840	cellular_component	ribosome
BL	0006412	biological_process	translation
BL	0019843	molecular_function	rRNA binding
BL	0022625	cellular_component	cytosolic large ribosomal subunit
BL	0070180	molecular_function	large ribosomal subunit rRNA binding
BL	1990904	cellular_component	ribonucleoprotein complex
BM	0003723	molecular_function	RNA binding
BM	0003735	molecular_function	structural constituent of ribosome
BM	0005840	cellular_component	ribosome
BM	0006412	biological_process	translation
BM	0022625	cellular_component	cytosolic large ribosomal subunit
BM	0042273	biological_process	ribosomal large subunit biogenesis
BM	1990904	cellular_component	ribonucleoprotein complex
BN	0003723	molecular_function	RNA binding
BN	0003735	molecular_function	structural constituent of ribosome
BN	0005840	cellular_component	ribosome
BN	0006412	biological_process	translation
BN	0022625	cellular_component	cytosolic large ribosomal subunit
BN	0042273	biological_process	ribosomal large subunit biogenesis
BN	1990904	cellular_component	ribonucleoprotein complex
BO	0003723	molecular_function	RNA binding
BO	0003735	molecular_function	structural constituent of ribosome
BO	0005737	cellular_component	cytoplasm
BO	0005840	cellular_component	ribosome
BO	0006412	biological_process	translation
BO	0015934	cellular_component	large ribosomal subunit
BO	0019843	molecular_function	rRNA binding
BO	0022625	cellular_component	cytosolic large ribosomal subunit
BO	0043232	cellular_component	intracellular non-membrane-bounded organelle
BO	1990904	cellular_component	ribonucleoprotein complex
BP	0002181	biological_process	cytoplasmic translation
BP	0003723	molecular_function	RNA binding
BP	0003735	molecular_function	structural constituent of ribosome
BP	0005840	cellular_component	ribosome
BP	0006412	biological_process	translation
BP	0022625	cellular_component	cytosolic large ribosomal subunit
BP	0022626	cellular_component	cytosolic ribosome
BP	1990904	cellular_component	ribonucleoprotein complex
BQ	0003723	molecular_function	RNA binding
BQ	0003735	molecular_function	structural constituent of ribosome
BQ	0005840	cellular_component	ribosome
BQ	0006412	biological_process	translation
BQ	0008097	molecular_function	5S rRNA binding
BQ	0019843	molecular_function	rRNA binding
BQ	0022625	cellular_component	cytosolic large ribosomal subunit
BQ	1990904	cellular_component	ribonucleoprotein complex
BR	0003723	molecular_function	RNA binding
BR	0003735	molecular_function	structural constituent of ribosome
BR	0005737	cellular_component	cytoplasm
BR	0005840	cellular_component	ribosome
BR	0006412	biological_process	translation
BR	0022625	cellular_component	cytosolic large ribosomal subunit
BR	0043232	cellular_component	intracellular non-membrane-bounded organelle
BR	1990904	cellular_component	ribonucleoprotein complex
BS	0003723	molecular_function	RNA binding
BS	0003735	molecular_function	structural constituent of ribosome
BS	0005840	cellular_component	ribosome
BS	0006412	biological_process	translation
BS	0019843	molecular_function	rRNA binding
BS	0022625	cellular_component	cytosolic large ribosomal subunit
BS	0070180	molecular_function	large ribosomal subunit rRNA binding
BS	1990904	cellular_component	ribonucleoprotein complex
BT	0003723	molecular_function	RNA binding
BT	0003735	molecular_function	structural constituent of ribosome
BT	0005840	cellular_component	ribosome
BT	0006412	biological_process	translation
BT	0019843	molecular_function	rRNA binding
BT	0070180	molecular_function	large ribosomal subunit rRNA binding
BT	1990904	cellular_component	ribonucleoprotein complex
BU	0003735	molecular_function	structural constituent of ribosome
BU	0005840	cellular_component	ribosome
BU	0006412	biological_process	translation
BU	0022625	cellular_component	cytosolic large ribosomal subunit
BU	1990904	cellular_component	ribonucleoprotein complex
BV	0002181	biological_process	cytoplasmic translation
BV	0003723	molecular_function	RNA binding
BV	0003735	molecular_function	structural constituent of ribosome
BV	0005840	cellular_component	ribosome
BV	0006412	biological_process	translation
BV	0015934	cellular_component	large ribosomal subunit
BV	0019843	molecular_function	rRNA binding
BV	0022625	cellular_component	cytosolic large ribosomal subunit
BV	1990904	cellular_component	ribonucleoprotein complex
BW	0003723	molecular_function	RNA binding
BW	0003735	molecular_function	structural constituent of ribosome
BW	0005840	cellular_component	ribosome
BW	0006412	biological_process	translation
BW	0019843	molecular_function	rRNA binding
BW	0022625	cellular_component	cytosolic large ribosomal subunit
BW	1990904	cellular_component	ribonucleoprotein complex
BX	0002181	biological_process	cytoplasmic translation
BX	0003723	molecular_function	RNA binding
BX	0003735	molecular_function	structural constituent of ribosome
BX	0005840	cellular_component	ribosome
BX	0006412	biological_process	translation
BX	0015934	cellular_component	large ribosomal subunit
BX	0019843	molecular_function	rRNA binding
BX	0022625	cellular_component	cytosolic large ribosomal subunit
BX	0042273	biological_process	ribosomal large subunit biogenesis
BX	1990904	cellular_component	ribonucleoprotein complex
BY	0003723	molecular_function	RNA binding
BY	0003735	molecular_function	structural constituent of ribosome
BY	0005840	cellular_component	ribosome
BY	0006412	biological_process	translation
BY	0008270	molecular_function	zinc ion binding
BY	0019843	molecular_function	rRNA binding
BY	0042273	biological_process	ribosomal large subunit biogenesis
BY	0046872	molecular_function	metal ion binding
BY	1990904	cellular_component	ribonucleoprotein complex
BZ	0003735	molecular_function	structural constituent of ribosome
BZ	0005840	cellular_component	ribosome
BZ	0006412	biological_process	translation
BZ	1990904	cellular_component	ribonucleoprotein complex
Ba	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ba	0003723	molecular_function	RNA binding
Ba	0003735	molecular_function	structural constituent of ribosome
Ba	0005840	cellular_component	ribosome
Ba	0006412	biological_process	translation
Ba	0015934	cellular_component	large ribosomal subunit
Ba	0022625	cellular_component	cytosolic large ribosomal subunit
Ba	1990904	cellular_component	ribonucleoprotein complex
Bb	0003723	molecular_function	RNA binding
Bb	0003735	molecular_function	structural constituent of ribosome
Bb	0005840	cellular_component	ribosome
Bb	0006412	biological_process	translation
Bb	0022625	cellular_component	cytosolic large ribosomal subunit
Bb	1990904	cellular_component	ribonucleoprotein complex
Bc	0002181	biological_process	cytoplasmic translation
Bc	0003735	molecular_function	structural constituent of ribosome
Bc	0005840	cellular_component	ribosome
Bc	0006412	biological_process	translation
Bc	0022625	cellular_component	cytosolic large ribosomal subunit
Bc	1990904	cellular_component	ribonucleoprotein complex
Bd	0003735	molecular_function	structural constituent of ribosome
Bd	0005840	cellular_component	ribosome
Bd	0006412	biological_process	translation
Bd	0022625	cellular_component	cytosolic large ribosomal subunit
Bd	1990904	cellular_component	ribonucleoprotein complex
Be	0003735	molecular_function	structural constituent of ribosome
Be	0005840	cellular_component	ribosome
Be	0006412	biological_process	translation
Be	0022625	cellular_component	cytosolic large ribosomal subunit
Be	0042254	biological_process	ribosome biogenesis
Be	1990904	cellular_component	ribonucleoprotein complex
Bf	0003735	molecular_function	structural constituent of ribosome
Bf	0005840	cellular_component	ribosome
Bf	0006412	biological_process	translation
Bg	0003723	molecular_function	RNA binding
Bg	0003735	molecular_function	structural constituent of ribosome
Bg	0005840	cellular_component	ribosome
Bg	0006412	biological_process	translation
Bg	0008270	molecular_function	zinc ion binding
Bg	0046872	molecular_function	metal ion binding
Bg	0070180	molecular_function	large ribosomal subunit rRNA binding
Bg	1990904	cellular_component	ribonucleoprotein complex
Bh	0003723	molecular_function	RNA binding
Bh	0003735	molecular_function	structural constituent of ribosome
Bh	0005840	cellular_component	ribosome
Bh	0006412	biological_process	translation
Bh	0008270	molecular_function	zinc ion binding
Bh	0019843	molecular_function	rRNA binding
Bh	0022625	cellular_component	cytosolic large ribosomal subunit
Bh	0046872	molecular_function	metal ion binding
Bh	1990904	cellular_component	ribonucleoprotein complex
Bi	0003735	molecular_function	structural constituent of ribosome
Bi	0005840	cellular_component	ribosome
Bi	0006412	biological_process	translation
Bi	0022625	cellular_component	cytosolic large ribosomal subunit
Bi	1990904	cellular_component	ribonucleoprotein complex
Bj	0003735	molecular_function	structural constituent of ribosome
Bj	0005840	cellular_component	ribosome
Bj	0006412	biological_process	translation
Bj	1990904	cellular_component	ribonucleoprotein complex
Bk	0005840	cellular_component	ribosome
Bl	0003723	molecular_function	RNA binding
Bl	0003735	molecular_function	structural constituent of ribosome
Bl	0005840	cellular_component	ribosome
Bl	0006412	biological_process	translation
Bl	0008270	molecular_function	zinc ion binding
Bl	0019843	molecular_function	rRNA binding
Bl	0022625	cellular_component	cytosolic large ribosomal subunit
Bl	0046872	molecular_function	metal ion binding
Bl	0070180	molecular_function	large ribosomal subunit rRNA binding
Bl	1990904	cellular_component	ribonucleoprotein complex
Bm	0003735	molecular_function	structural constituent of ribosome
Bm	0005829	cellular_component	cytosol
Bm	0005840	cellular_component	ribosome
Bm	0006412	biological_process	translation
Bm	1990904	cellular_component	ribonucleoprotein complex
Bn	0003735	molecular_function	structural constituent of ribosome
Bn	0005840	cellular_component	ribosome
Bn	0006412	biological_process	translation
Bn	1990904	cellular_component	ribonucleoprotein complex
Bp	0042254	biological_process	ribosome biogenesis
Bp	0042256	biological_process	cytosolic ribosome assembly
Bq	0050825	molecular_function	ice binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN Ag 301

Chain	Residue
Ag	CYS127
Ag	CYS132
Ag	CYS134
Ag	HIS138

site_id	AC2
Number of Residues	4
Details	binding site for residue ZN Ar 101

Chain	Residue
Ar	CYS21
Ar	CYS24
Ar	CYS39
Ar	CYS42

site_id	AC3
Number of Residues	5
Details	binding site for residue ZN As 201

Chain	Residue
As	CYS20
As	HIS23
As	CYS76
As	HOH301
As	CYS15

site_id	AC4
Number of Residues	4
Details	binding site for residue ZN Ax 101

Chain	Residue
Ax	CYS20
Ax	CYS23
Ax	CYS39
Ax	CYS42

site_id	AC5
Number of Residues	4
Details	binding site for residue ZN Az 101

Chain	Residue
Az	CYS13
Az	CYS16
Az	CYS42
Az	CYS45

site_id	AC6
Number of Residues	4
Details	binding site for residue ZN Az 102

Chain	Residue
Az	CYS31
Az	CYS34
Az	CYS54
Az	CYS57

site_id	AC7
Number of Residues	5
Details	binding site for residue ZN BY 101

Chain	Residue
BY	CYS7
BY	CYS10
BY	CYS33
BY	CYS37
BY	HOH212

site_id	AC8
Number of Residues	5
Details	binding site for residue ZN Be 101

Chain	Residue
Be	CYS36
Be	CYS39
Be	CYS72
Be	CYS75
Be	HOH208

site_id	AC9
Number of Residues	3
Details	binding site for residue ZN Be 102

Chain	Residue
Be	CYS39
Be	HOH203
Be	HOH208

site_id	AD1
Number of Residues	5
Details	binding site for residue ZN Bg 101

Chain	Residue
Bg	CYS38
Bg	CYS41
Bg	CYS56
Bg	CYS59
Bg	HOH205

site_id	AD2
Number of Residues	4
Details	binding site for residue ZN Bh 101

Chain	Residue
Bh	CYS20
Bh	CYS23
Bh	CYS35
Bh	CYS38

site_id	AD3
Number of Residues	4
Details	binding site for residue ZN Bj 101

Chain	Residue
Bj	CYS17
Bj	CYS20
Bj	CYS31
Bj	CYS34

site_id	AD4
Number of Residues	4
Details	binding site for residue ZN Bl 101

Chain	Residue
Bl	CYS11
Bl	CYS14
Bl	CYS71
Bl	CYS74

site_id	AD5
Number of Residues	4
Details	binding site for residue ZN Bo 101

Chain	Residue
Bo	CYS20
Bo	CYS23
Bo	HIS36
Bo	HIS41

site_id	AD6
Number of Residues	6
Details	binding site for residues OMC Aa 752 and OMU Aa 753

Chain	Residue
Aa	A718
Aa	G719
Aa	G720
Aa	C751
Aa	G754
Aq	LYS107

site_id	AD7
Number of Residues	4
Details	binding site for residues 5MU Aa 917 and LV2 Aa 918

Chain	Residue
Aa	U916
Aa	A919
Aa	A920
Al	LYS132

site_id	AD8
Number of Residues	11
Details	binding site for residues 5MC Aa 923 and OMC Aa 924

Chain	Residue
Aa	G902
Aa	OMG913
Aa	G914
Aa	C921
Aa	G922
Aa	G925
Aa	G926
Am	ARG50
Am	PRO53
Am	ASP54
Am	GLY55

site_id	AD9
Number of Residues	9
Details	binding site for residues OMG Aa 994 and 2MG Aa 995

Chain	Residue
Aa	A934
Aa	G992
Aa	A993
Aa	U996
Aa	C1159
Aa	C1160
Aa	C1161
Aa	A1166
Aa	C1167

site_id	AE1
Number of Residues	7
Details	binding site for residues 5MC Aa 1003 and 5MC Aa 1004

Chain	Residue
Aa	G1002
Aa	G1005
Aa	G1149
Aa	G1150
Ac	LYS179
Am	SER52
Ar	ARG44

site_id	AE2
Number of Residues	5
Details	binding site for residues 5MC Aa 1006 and 5MC Aa 1007

Chain	Residue
Aa	G1145
Aa	G1146
Aa	A919
Aa	G1005
Aa	G1008

site_id	AE3
Number of Residues	9
Details	binding site for residues MA6 Aa 1467 and MA6 Aa 1468

Chain	Residue
Aa	C1356
Aa	G1357
Aa	OMU1358
Aa	G1446
Aa	G1465
Aa	G1466
Aa	C1469
Bk	MET14
Bk	ARG22

site_id	AE4
Number of Residues	13
Details	binding site for residues OMG BA 65 and OMC BA 66

Chain	Residue
BA	G64
BA	G67
BA	G79
BA	C122
BA	C123
BA	U135
BA	HOH3287
BA	HOH3670
BA	HOH4034
BA	HOH4065
BA	HOH4830
Bi	ARG12
Bi	LYS15

site_id	AE5
Number of Residues	8
Details	binding site for residues OMG BA 2168 and OMC BA 2169

Chain	Residue
BA	A2166
BA	A2167
BA	G2170
BA	C2607
BA	A2681
BA	G2715
BA	C2716
BA	HOH4791

site_id	AE6
Number of Residues	10
Details	binding site for residues OMG BA 2527 and OMG BA 2528

Chain	Residue
BA	C2501
BA	C2502
BA	C2503
BA	G2526
BA	A2529
Bl	LYS27
Bl	LYS64
Bl	ASP66
Bl	GLN82
Bl	GLY83

Functional Information from PROSITE/UniProt

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RgyIpRAfGRatpfneqtTHIEIvV

Chain	Residue	Details
BV	ARG127-VAL151

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GQkVhiviepsyhk.GmpDprFhGrTG

Chain	Residue	Details
BU	GLY38-GLY63

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDkVlIaEtRPIS

Chain	Residue	Details
As	GLY82-SER94

site_id	PS00228
Number of Residues	4
Details	TUBULIN_B_AUTOREG Tubulin-beta mRNA autoregulation signal. MREI

Chain	Residue	Details
As	MET1-ILE4

site_id	PS00528
Number of Residues	15
Details	RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPtsWyIhR

Chain	Residue	Details
Af	HIS9-ARG23

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGfmGQaeAarvAiARAL

Chain	Residue	Details
Al	GLY68-LEU86

site_id	PS00529
Number of Residues	23
Details	RIBOSOMAL_S24E Ribosomal protein S24e signature. FGsnVSkGYAkAYETrermlyiE

Chain	Residue	Details
Bn	PHE60-GLU82

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CeekeIPYvyVpSKkeLG

Chain	Residue	Details
BH	CYS70-GLY87

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. TLamLrLhRinHlVivddtpsyrgMIqkVkdYI

Chain	Residue	Details
Ba	THR22-ILE54

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ETEREAReI

Chain	Residue	Details
Ay	GLU58-ILE66

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. WrLerPRrqRAeVNIsKI

Chain	Residue	Details
BR	TRP36-ILE53

site_id	PS00580
Number of Residues	23
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FlRqewwRypKFkndpkWRRpkG

Chain	Residue	Details
Bd	PHE21-GLY43

site_id	PS00475
Number of Residues	31
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGtGkLtra..LvVkayyVTpkAeekIkaaG

Chain	Residue	Details
BO	LYS112-GLY142

site_id	PS00526
Number of Residues	20
Details	RIBOSOMAL_L19E Ribosomal protein L19e signature. QRRIaAellkCGenrIWIDP

Chain	Residue	Details
BS	GLN7-PRO26

site_id	PS00051
Number of Residues	17
Details	RIBOSOMAL_L39E Ribosomal protein L39e signature. KTnrkVitHpkrRHWRR

Chain	Residue	Details
Bi	LYS30-ARG46

site_id	PS01144
Number of Residues	15
Details	RIBOSOMAL_L31E Ribosomal protein L31e signature. VIIGtdVNeKiWeRG

Chain	Residue	Details
Bc	VAL48-GLY62

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. AertGVrmsGPIpLPT

Chain	Residue	Details
Am	ALA27-THR42

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKefvpveIkeemIGhyLGEFamT

Chain	Residue	Details
Au	ASN86-THR110

site_id	PS01191
Number of Residues	13
Details	RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. ViGRViEtTLkDL

Chain	Residue	Details
Ad	VAL47-LEU59

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. YcGreFePGtGkmFvRnD

Chain	Residue	Details
BY	TYR9-ASP26

site_id	PS00712
Number of Residues	16
Details	RIBOSOMAL_S17E Ribosomal protein S17e signature. VtSKtIRNrIAGYiTR

Chain	Residue	Details
Bm	VAL41-ARG56

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVKLKpeydaseI

Chain	Residue	Details
BW	LYS64-ILE79

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GilIVSTSqGVMthkeAL

Chain	Residue	Details
Aj	GLY100-LEU117

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. ITGGtDkdGfPM

Chain	Residue	Details
Ah	ILE63-MET74

site_id	PS01267
Number of Residues	20
Details	UPF0023 Uncharacterized protein family UPF0023 signature. DvpIEEILatpyVFkdahKG

Chain	Residue	Details
Bp	ASP37-GLY56

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. NPMVIRnLRRDIARL

Chain	Residue	Details
BZ	ASN40-LEU54

site_id	PS00527
Number of Residues	22
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. R.Cgqygpiirihg.LMLCRhCFR

Chain	Residue	Details
Ar	ARG23-ARG44

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtiVYRkglArTmkqARqLI

Chain	Residue	Details
Ae	LEU101-ILE125

site_id	PS00028
Number of Residues	22
Details	ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. Cpr..CgmvFrsakaytrHvnka.H

Chain	Residue	Details
Bo	CYS20-HIS41

site_id	PS01168
Number of Residues	33
Details	RIBOSOMAL_S27E Ribosomal protein S27e signature. KCidCgneqivFShPatpvrClvCGatLvePtG

Chain	Residue	Details
Ax	LYS19-GLY51

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DRARsLGYqAkqGYVVVRvRVrRG

Chain	Residue	Details
BP	ASP46-GLY69

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAmR

Chain	Residue	Details
Ao	LYS63-ARG70

site_id	PS01145
Number of Residues	14
Details	RIBOSOMAL_L34E Ribosomal protein L34e signature. SrSwRrkyvRTPGG

Chain	Residue	Details
Be	SER7-GLY20

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KpVKKldLRfrC

Chain	Residue	Details
Bl	LYS60-CYS71

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALsrA.GLrIgrveDvTPiPHD

Chain	Residue	Details
An	ILE105-ASP127

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrirFrVlaAVGNrd.GyVGlGighgr.EVgi.AI

Chain	Residue	Details
Ag	GLY77-ILE109

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPwktdrGRkafkrLkVYvG

Chain	Residue	Details
BK	VAL79-GLY102

site_id	PS00628
Number of Residues	20
Details	RIBOSOMAL_S19E Ribosomal protein S19e signature. PehfykaGgsIiRkALQqLE

Chain	Residue	Details
Av	PRO87-GLU106

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NkkeRrlAImSAIaATAnydlvraRGH

Chain	Residue	Details
BE	ASN106-HIS132

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHelGlpVRGQ

Chain	Residue	Details
Ap	ARG117-GLN130

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LrkHLeqhPkDkhSrrgLqlIeskirrLvkY

Chain	Residue	Details
Aq	LEU98-TYR128

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. LdQYLAAGVHIG

Chain	Residue	Details
Ab	LEU8-GLY19

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdvLIVtDpraDhqaLkEaveiGIP

Chain	Residue	Details
Ab	PRO111-PRO135

site_id	PS01257
Number of Residues	22
Details	RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRygnGMRrPFGKPiGlaARV

Chain	Residue	Details
BJ	ALA105-VAL126

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QatrItkWdrRvFqDGIYIveK

Chain	Residue	Details
BG	GLN156-LYS177

site_id	PS01077
Number of Residues	21
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTaPkGkRnrtptHirCrRCG

Chain	Residue	Details
Bh	GLY4-GLY24

site_id	PS00993
Number of Residues	21
Details	RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTllGRphtvsaLaViDpG

Chain	Residue	Details
Bb	GLU70-GLY90

site_id	PS01193
Number of Residues	20
Details	RIBOSOMAL_S8E Ribosomal protein S8e signature. KkpSGGriila.RkKrKrELG

Chain	Residue	Details
Ak	LYS10-GLY29

site_id	PS01105
Number of Residues	22
Details	RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKIvRtHGtrGeVkAvFkpgLP

Chain	Residue	Details
Bf	GLY69-PRO90

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. GDkVkVMrGdfKGve.GkV

Chain	Residue	Details
BX	GLY49-VAL66

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. LhegellDviAvTkGKGtqGpvkR

Chain	Residue	Details
BD	LEU193-ARG216

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	18
Details	ZN_FING: C4-type => ECO:0000255\|HAMAP-Rule:MF_00547

Chain	Residue	Details
Bh	CYS20-CYS38
Ar	CYS24
Ar	CYS39
Ar	CYS42

site_id	SWS_FT_FI2
Number of Residues	4
Details	BINDING: BINDING => ECO:0000255\|HAMAP-Rule:MF_00547

Chain	Residue	Details
Bh	CYS20
Bh	CYS23
Bh	CYS35
Bh	CYS38

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)