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6RBI

Crystal structure of KDM5B in complex with 5-(1H-tetrazol-5-yl)quinolin-8-ol

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 801
ChainResidue
ACYS692
ACYS695
ACYS715
AHIS718

site_idAC2
Number of Residues5
Detailsbinding site for residue MN A 802
ChainResidue
AHIS499
AGLU501
AJX8805
AHOH985
AHOH996

site_idAC3
Number of Residues6
Detailsbinding site for residue PO4 A 803
ChainResidue
AHIS622
ALYS694
AHIS718
AHOH904
AHOH906
AHOH986

site_idAC4
Number of Residues7
Detailsbinding site for residue EDO A 804
ChainResidue
AASP688
AGLU689
AARG690
AGLN691
AVAL693
AGLY711
ALEU713

site_idAC5
Number of Residues14
Detailsbinding site for residue JX8 A 805
ChainResidue
ATYR488
APHE496
AHIS499
AGLU501
ALYS517
ATRP519
AHIS587
AASN591
AMN802
AHOH973
AHOH985
AHOH996
AHOH1000
AHOH1005

site_idAC6
Number of Residues3
Detailsbinding site for residue EDO A 806
ChainResidue
AGLY524
AARG584
AHOH1002

site_idAC7
Number of Residues2
Detailsbinding site for residue EDO A 807
ChainResidue
ACYS497
AHOH908

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO A 808
ChainResidue
AGLU631
ALYS635
AGLU683
APHE700
ATYR736

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN A 809
ChainResidue
ACYS706
ACYS708
ACYS723
ACYS725

site_idAD1
Number of Residues6
Detailsbinding site for residue NA A 810
ChainResidue
ALEU90
AASN91
ALEU413
ATHR416
AGLU419
AHOH967

site_idAD2
Number of Residues1
Detailsbinding site for residue NA A 811
ChainResidue
ATYR618

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues52
DetailsZN_FING: C5HC2 => ECO:0000269|PubMed:26741168, ECO:0000269|PubMed:27214403, ECO:0000269|PubMed:28262558
ChainResidueDetails
ACYS692-MET744

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P29375
ChainResidueDetails
ATYR425
ASER507
AASN509
ALYS517

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000305|PubMed:26741168, ECO:0000305|PubMed:27214403, ECO:0000305|PubMed:28262558
ChainResidueDetails
AHIS499
AGLU501
AHIS587

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS769

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PDB entries from 2024-07-24

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