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6RA1

Human Cyclophilin D in complex with norbornane fragment derivative

Functional Information from GO Data
ChainGOidnamespacecontents
A0000413biological_processprotein peptidyl-prolyl isomerization
A0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
A0006457biological_processprotein folding
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue JWB A 301
ChainResidue
AARG97
AARG97
AGLN105
AALA143
AASN144
APHE155
AHIS168
AJVQ302
AHOH401

site_idAC2
Number of Residues16
Detailsbinding site for residue JVQ A 302
ChainResidue
AGLY44
AASN113
AGLY114
ATHR115
AGLY116
AGLY117
ASER123
AARG124
AALA143
AASN144
AALA145
ATHR149
AGLY151
AGLN153
AJWB301
AHOH404

site_idAC3
Number of Residues2
Detailsbinding site for residue PEG A 303
ChainResidue
ASER101
ALYS190

site_idAC4
Number of Residues8
Detailsbinding site for residue PG4 A 304
ChainResidue
ALYS118
ASER119
AILE120
AGLY122
AVAL135
APRO137
AHIS173
AHOH455

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 A 305
ChainResidue
ASER189
ALYS190
AHOH412

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 306
ChainResidue
AHIS96
AASN113
AALA145
AGLY146
AHOH436

Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgStFHRVIpsFMcQAG
ChainResidueDetails
ATYR90-GLY107

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS67

site_idSWS_FT_FI2
Number of Residues3
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS86
AILE175
ALYS190

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS167

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: S-nitrosocysteine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ACYS203

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PDB entries from 2024-07-17

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