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6R9S

Human Cyclophilin D in complex with bicyclic fragment

Functional Information from GO Data
ChainGOidnamespacecontents
A0000413biological_processprotein peptidyl-prolyl isomerization
A0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
A0006457biological_processprotein folding
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue JVN A 301
ChainResidue
AGLY114
AJVN302
AHOH435
AHOH481
AHOH497
ATHR115
AGLY116
ASER123
AARG124
AASN144
ATHR149
AGLY151
AGLN153

site_idAC2
Number of Residues13
Detailsbinding site for residue JVN A 302
ChainResidue
AGLY44
AASP69
AVAL70
APRO72
ATHR115
AARG124
AASN129
ATHR131
AALA145
AJVN301
AHOH401
AHOH415
AHOH472

site_idAC3
Number of Residues7
Detailsbinding site for residue 1PE A 303
ChainResidue
AGLY56
AARG97
AGLN105
APHE155
ASER191
AHOH457
AHOH506

site_idAC4
Number of Residues5
Detailsbinding site for residue PG4 A 304
ChainResidue
ATYR121
AVAL135
APRO137
AHIS173
AHOH502

site_idAC5
Number of Residues6
Detailsbinding site for residue SO4 A 305
ChainResidue
ALYS73
AGLU176
AGLY177
AMET178
AASP179
AHOH448

Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgStFHRVIpsFMcQAG
ChainResidueDetails
ATYR90-GLY107

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues156
DetailsDomain: {"description":"PPIase cyclophilin-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00156","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"S-nitrosocysteine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

248335

PDB entries from 2026-01-28

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