6QGW

Crystal structure of E.coli BamA beta-barrel in complex with nanobody E6

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0019867	cellular_component	outer membrane
A	0071709	biological_process	membrane assembly

Functional Information from PDB Data

site_id	AC1
Number of Residues	1
Details	binding site for residue C8E A 901

Chain	Residue
A	C8E911

---

site_id	AC2
Number of Residues	3
Details	binding site for residue C8E A 902

Chain	Residue
A	THR633
A	SER715
A	C8E903

---

site_id	AC3
Number of Residues	2
Details	binding site for residue C8E A 903

Chain	Residue
A	THR617
A	C8E902

---

site_id	AC4
Number of Residues	1
Details	binding site for residue C8E A 904

Chain	Residue
A	ILE430

---

site_id	AC5
Number of Residues	1
Details	binding site for residue C8E A 908

Chain	Residue
A	VAL513

---

site_id	AC6
Number of Residues	5
Details	binding site for residue C8E A 911

Chain	Residue
A	PHE738
A	GLY771
A	ILE772
A	C8E901
A	PHE737

---

site_id	AC7
Number of Residues	1
Details	binding site for residue C8E A 912

Chain	Residue
A	PHE572

---

site_id	AC8
Number of Residues	1
Details	binding site for residue C8E A 913

Chain	Residue
A	LEU780

---

site_id	AC9
Number of Residues	2
Details	binding site for residue C8E A 914

Chain	Residue
A	GLY460
A	THR461

---

site_id	AD1
Number of Residues	1
Details	binding site for residue C8E A 915

Chain	Residue
A	TRP449

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	Topological domain: {"description":"Extracellular; loop 1","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 2","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	63
Details	Topological domain: {"description":"Periplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	7
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 3","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	Topological domain: {"description":"Extracellular; loop 2","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 4","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	11
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 5","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	8
Details	Topological domain: {"description":"Extracellular; loop 3","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	1
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 6","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	12
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 7","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI11
Number of Residues	27
Details	Topological domain: {"description":"Extracellular; loop 4","evidences":[{"source":"PubMed","id":"23882017","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI12
Number of Residues	13
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 8","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI13
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 9","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI14
Number of Residues	7
Details	Topological domain: {"description":"Extracellular; loop 5","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI15
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 10","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI16
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 11","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI17
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 12","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI18
Number of Residues	12
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 13","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI19
Number of Residues	21
Details	Topological domain: {"description":"Extracellular; loop 7","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI20
Number of Residues	9
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 14","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI21
Number of Residues	10
Details	Transmembrane: {"description":"Beta stranded; Name=Strand 15","evidences":[{"source":"PubMed","id":"24914988","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI22
Number of Residues	13
Details	Topological domain: {"description":"Extracellular; loop 8","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---