Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue MN A 801 |
Chain | Residue |
A | ASP404 |
A | PHE405 |
A | ASP542 |
A | MG802 |
A | HHZ810 |
site_id | AC2 |
Number of Residues | 8 |
Details | binding site for residue MG A 802 |
Chain | Residue |
A | HHZ810 |
A | HOH1040 |
A | HOH1058 |
P | DOC12 |
A | TYR402 |
A | ASP404 |
A | ASP542 |
A | MN801 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue EDO A 803 |
Chain | Residue |
A | ASP6 |
A | TYR7 |
A | LYS240 |
A | LYS253 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue EDO A 804 |
Chain | Residue |
A | ASP4 |
A | LYS118 |
A | GLU251 |
A | SER340 |
A | ASP343 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue EDO A 805 |
Chain | Residue |
A | ILE142 |
A | TYR209 |
A | ASP215 |
A | HOH1094 |
site_id | AC6 |
Number of Residues | 1 |
Details | binding site for residue EDO A 806 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue EDO A 807 |
Chain | Residue |
A | TYR37 |
A | GLU111 |
A | TYR112 |
A | ASP113 |
A | ILE114 |
A | ARG119 |
site_id | AC8 |
Number of Residues | 2 |
Details | binding site for residue EDO A 808 |
Chain | Residue |
A | TYR594 |
A | ARG606 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue EDO A 809 |
Chain | Residue |
A | ARG746 |
A | ALA747 |
A | GLY749 |
A | HOH1041 |
site_id | AD1 |
Number of Residues | 22 |
Details | binding site for residue HHZ A 810 |
Chain | Residue |
A | ASP404 |
A | PHE405 |
A | ARG406 |
A | SER407 |
A | LEU408 |
A | TYR409 |
A | ARG460 |
A | LYS487 |
A | ASN491 |
A | ASP542 |
A | MN801 |
A | MG802 |
A | HOH938 |
A | HOH963 |
A | HOH970 |
A | HOH991 |
A | HOH1058 |
A | HOH1077 |
A | HOH1105 |
P | DOC12 |
T | DT4 |
T | DG5 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue NO3 A 811 |
Chain | Residue |
A | THR33 |
A | PHE34 |
A | LYS124 |
A | HOH1010 |
T | DC16 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue NO3 A 812 |
Chain | Residue |
A | LEU396 |
A | PRO549 |
A | ALA747 |
A | PHE748 |
site_id | AD4 |
Number of Residues | 4 |
Details | binding site for residue SO4 A 813 |
Chain | Residue |
A | TYR7 |
A | PRO115 |
A | PHE116 |
A | HOH911 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue MG T 101 |
Chain | Residue |
P | HOH107 |
T | DG8 |
T | HOH204 |
T | HOH223 |
Functional Information from PROSITE/UniProt
site_id | PS00116 |
Number of Residues | 9 |
Details | DNA_POLYMERASE_B DNA polymerase family B signature. YSDTDGFFA |
Chain | Residue | Details |
A | TYR538-ALA546 | |