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6PT1

Crystal Structure of Class D Beta-lactamase OXA-48 with Meropenem

Functional Information from GO Data
ChainGOidnamespacecontents
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0046677biological_processresponse to antibiotic
A0046872molecular_functionmetal ion binding
A0071555biological_processcell wall organization
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0046677biological_processresponse to antibiotic
B0046872molecular_functionmetal ion binding
B0071555biological_processcell wall organization
C0008658molecular_functionpenicillin binding
C0008800molecular_functionbeta-lactamase activity
C0016787molecular_functionhydrolase activity
C0017001biological_processantibiotic catabolic process
C0046677biological_processresponse to antibiotic
C0046872molecular_functionmetal ion binding
C0071555biological_processcell wall organization
D0008658molecular_functionpenicillin binding
D0008800molecular_functionbeta-lactamase activity
D0016787molecular_functionhydrolase activity
D0017001biological_processantibiotic catabolic process
D0046677biological_processresponse to antibiotic
D0046872molecular_functionmetal ion binding
D0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue CL A 301
ChainResidue
AARG206
BARG206

site_idAC2
Number of Residues2
Detailsbinding site for residue CL A 302
ChainResidue
ALYS73
ATRP157

site_idAC3
Number of Residues11
Detailsbinding site for residue MER A 303
ChainResidue
ALEU158
ALYS208
ATHR209
AGLY210
ATYR211
AARG250
AALA69
ASER70
ATRP105
ASER118
AVAL120

site_idAC4
Number of Residues3
Detailsbinding site for residue CL B 301
ChainResidue
BLYS73
BTRP157
BHOH462

site_idAC5
Number of Residues2
Detailsbinding site for residue CL C 301
ChainResidue
CARG206
DARG206

site_idAC6
Number of Residues2
Detailsbinding site for residue CL C 302
ChainResidue
CLYS73
CTRP157

site_idAC7
Number of Residues7
Detailsbinding site for residue GOL C 304
ChainResidue
CLYS94
CTRP95
CASP96
CPRO121
CVAL122
CHOH421
CHOH427

site_idAC8
Number of Residues3
Detailsbinding site for residue CL D 301
ChainResidue
DLYS73
DVAL120
DTRP157

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL D 303
ChainResidue
DLYS94
DTRP95
DASP96
DARG100
DHOH409

site_idAD1
Number of Residues14
Detailsbinding site for Di-peptide MER B 302 and SER B 70
ChainResidue
BPRO68
BALA69
BTHR71
BPHE72
BLYS73
BTRP105
BSER118
BVAL120
BLYS208
BTHR209
BGLY210
BTYR211
BARG250
BHOH455

site_idAD2
Number of Residues13
Detailsbinding site for Di-peptide MER C 303 and SER C 70
ChainResidue
CPRO68
CALA69
CTHR71
CPHE72
CLYS73
CSER118
CVAL120
CLEU158
CLYS208
CTHR209
CGLY210
CTYR211
CARG250

site_idAD3
Number of Residues14
Detailsbinding site for Di-peptide MER D 302 and SER D 70
ChainResidue
DPRO68
DALA69
DTHR71
DPHE72
DLYS73
DTRP105
DSER118
DVAL120
DLEU158
DLYS208
DTHR209
DGLY210
DTYR211
DARG250

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnSL
ChainResidueDetails
APRO68-LEU78

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PDB entries from 2024-06-12

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