6PT1
Crystal Structure of Class D Beta-lactamase OXA-48 with Meropenem
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-BM |
| Synchrotron site | APS |
| Beamline | 19-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-10-26 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 59.797, 106.512, 95.835 |
| Unit cell angles | 90.00, 104.66, 90.00 |
Refinement procedure
| Resolution | 30.994 - 2.000 |
| R-factor | 0.1881 |
| Rwork | 0.187 |
| R-free | 0.23120 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3hbr |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER (2.6.0) |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
| High resolution limit [Å] | 1.998 | 5.430 | 2.000 |
| Rmerge | 0.082 | 0.037 | 0.707 |
| Rmeas | 0.097 | 0.044 | 0.838 |
| Rpim | 0.051 | 0.023 | 0.446 |
| Number of reflections | 78000 | 3972 | 3855 |
| <I/σ(I)> | 9 | ||
| Completeness [%] | 99.6 | 98.9 | 99.7 |
| Redundancy | 3.6 | 3.6 | 3.4 |
| CC(1/2) | 0.997 | 0.762 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M Ammonium Acetate, 0.1 M Sodium Acetate pH-4.6, 30%(w/v) PEG-4000 |






